RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 SPANXN1Q5VSR9 72 aa9.05□□□□□ -0.96
PCDHGA1-202ENST00000517417 OR8A1Q8NGG7 326 aa9.05□□□□□ -0.96
PCDHGA1-202ENST00000517417 C2orf88Q9BSF0 95 aa9.05□□□□□ -0.96
PCDHGA1-202ENST00000517417 CORTO00230 105 aa9.05□□□□□ -0.96
PCDHGA1-202ENST00000517417 IGKV1-5P01602 117 aa9.05□□□□□ -0.96
PCDHGA1-202ENST00000517417 MGPP08493 103 aa9.05□□□□□ -0.96
PCDHGA1-202ENST00000517417 APOBEC3AP31941 199 aaPredicted RBP9.05□□□□□ -0.96
PCDHGA1-202ENST00000517417 GFRA1P56159 465 aa9.05□□□□□ -0.96
PCDHGA1-202ENST00000517417 SRSF7Q16629 238 aaKnown RBP eCLIP9.05□□□□□ -0.96
PCDHGA1-202ENST00000517417 STPG3Q8N7X2 389 aa9.05□□□□□ -0.96
PCDHGA1-202ENST00000517417 IMMP2LQ96T52 175 aa9.05□□□□□ -0.96
PCDHGA1-202ENST00000517417 TMEM191AQ9H0A3 160 aa9.05□□□□□ -0.96
PCDHGA1-202ENST00000517417 SEMA5BQ9P283 1151 aa9.05□□□□□ -0.96
PCDHGA1-202ENST00000517417 CCL3L1P16619 93 aa9.05□□□□□ -0.96
PCDHGA1-202ENST00000517417 FOXF2Q12947 444 aa9.05□□□□□ -0.96
PCDHGA1-202ENST00000517417 SPRR3Q9UBC9 169 aa9.05□□□□□ -0.96
PCDHGA1-202ENST00000517417 MRPS18CQ9Y3D5 142 aaKnown RBP9.05□□□□□ -0.96
PCDHGA1-202ENST00000517417 IGKV1-6A0A0C4DH72 117 aa9.04□□□□□ -0.96
PCDHGA1-202ENST00000517417 MAS1LP35410 378 aa9.04□□□□□ -0.96
PCDHGA1-202ENST00000517417 TCF23Q7RTU1 214 aa9.04□□□□□ -0.96
PCDHGA1-202ENST00000517417 C1QTNF9P0C862 333 aa9.04□□□□□ -0.96
PCDHGA1-202ENST00000517417 KLRB1Q12918 225 aa9.04□□□□□ -0.96
PCDHGA1-202ENST00000517417 FBXL15Q9H469 300 aa9.04□□□□□ -0.96
PCDHGA1-202ENST00000517417 HSPB7Q9UBY9 170 aa9.04□□□□□ -0.96
PCDHGA1-202ENST00000517417 PGPEP1LA6NFU8 196 aa9.04□□□□□ -0.96
PCDHGA1-202ENST00000517417 RAMP3O60896 148 aa9.04□□□□□ -0.96
PCDHGA1-202ENST00000517417 PPOXP50336 477 aa9.04□□□□□ -0.96
PCDHGA1-202ENST00000517417 GGNQ86UU5 652 aa9.04□□□□□ -0.96
PCDHGA1-202ENST00000517417 FAM57AQ8TBR7 257 aa9.04□□□□□ -0.96
PCDHGA1-202ENST00000517417 IGHV3OR16-8A0A075B7F1 116 aa9.04□□□□□ -0.96
PCDHGA1-202ENST00000517417 GATA2P23769 480 aaPredicted RBP9.04□□□□□ -0.96
PCDHGA1-202ENST00000517417 ZNF726P1Q15940 193 aa9.04□□□□□ -0.96
PCDHGA1-202ENST00000517417 MAJINQ3KP22 176 aa9.04□□□□□ -0.96
PCDHGA1-202ENST00000517417 Q6ZS49 121 aa9.04□□□□□ -0.96
PCDHGA1-202ENST00000517417 ZCCHC14Q8WYQ9 949 aaKnown RBP9.04□□□□□ -0.96
PCDHGA1-202ENST00000517417 SSBP3Q9BWW4 388 aaPredicted RBP9.04□□□□□ -0.96
PCDHGA1-202ENST00000517417 GSX1Q9H4S2 264 aaPredicted RBP9.04□□□□□ -0.96
PCDHGA1-202ENST00000517417 IFITM10A6NMD0 228 aa9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 LYNX1G3V0Z9 82 aa9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 TCF21O43680 179 aa9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 LYNX1P0DP58 116 aa9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 RPL7P18124 248 aaKnown RBP9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 NUTF2P61970 127 aaKnown RBP9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 C20orf204Q6ZNR8 217 aa9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 C1orf162Q8NEQ5 155 aaPredicted RBP9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 ELOVL5Q9NYP7 299 aa9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 IGHV3-49A0A0A0MS15 119 aa9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 KBTBD11-OT1A0A1B0GTJ5 212 aa9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 A8MWP6 167 aa9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 IQCF6A8MYZ5 107 aa9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 MFAP4P55083 255 aa9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 Q0VFX4 171 aa9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 COL5A1-AS1Q5SY13 56 aa9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 OR4A47Q6IF82 309 aa9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 PCSK4Q6UW60 755 aa9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 DTX1Q86Y01 620 aa9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 TXNDC17Q9BRA2 123 aa9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 SCGB1C2P0DMR2 95 aa9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 RBPMS2Q6ZRY4 209 aaKnown RBP9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 SPSB4Q96A44 273 aa9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 C16orf92Q96LL3 132 aa9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 COL25A1Q9BXS0 654 aaPredicted RBP9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 MAP1LC3CQ9BXW4 147 aa9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 MRPL37Q9BZE1 423 aaKnown RBP9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 SLC17A3O00476 420 aa9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 EREGO14944 169 aa9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 RNFT1Q5M7Z0 435 aa9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 TMEM78Q5T7P6 136 aa9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 OR4C5Q8NGB2 326 aa9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 AGMATQ9BSE5 352 aa9.03□□□□□ -0.96
PCDHGA1-202ENST00000517417 IL4P05112 153 aa9.02□□□□□ -0.97
PCDHGA1-202ENST00000517417 ZNF146Q15072 292 aa9.02□□□□□ -0.97
PCDHGA1-202ENST00000517417 ACTL10Q5JWF8 245 aa9.02□□□□□ -0.97
PCDHGA1-202ENST00000517417 CSPG4Q6UVK1 2322 aa9.02□□□□□ -0.97
PCDHGA1-202ENST00000517417 SCO2A0A1W2PP80 73 aa9.02□□□□□ -0.97
PCDHGA1-202ENST00000517417 A1L4Q6 167 aa9.02□□□□□ -0.97
PCDHGA1-202ENST00000517417 C17orf100A8MU93 164 aa9.02□□□□□ -0.97
PCDHGA1-202ENST00000517417 PFN1P07737 140 aaKnown RBP9.02□□□□□ -0.97
PCDHGA1-202ENST00000517417 ADMP35318 185 aa9.02□□□□□ -0.97
PCDHGA1-202ENST00000517417 TWIST1Q15672 202 aa9.02□□□□□ -0.97
PCDHGA1-202ENST00000517417 TMEM177Q53S58 311 aa9.02□□□□□ -0.97
PCDHGA1-202ENST00000517417 WDR82Q6UXN9 313 aa9.02□□□□□ -0.97
PCDHGA1-202ENST00000517417 DYNLRB2Q8TF09 96 aa9.02□□□□□ -0.97
PCDHGA1-202ENST00000517417 PGLYRP4Q96LB8 373 aa9.02□□□□□ -0.97
PCDHGA1-202ENST00000517417 SCRT1Q9BWW7 348 aa9.02□□□□□ -0.97
PCDHGA1-202ENST00000517417 EML5Q05BV3 1969 aa9.02□□□□□ -0.97
PCDHGA1-202ENST00000517417 TMEM189A5PLL7 270 aa9.02□□□□□ -0.97
PCDHGA1-202ENST00000517417 COX6B1P14854 86 aa9.02□□□□□ -0.97
PCDHGA1-202ENST00000517417 IGFBP2P18065 325 aa9.02□□□□□ -0.97
PCDHGA1-202ENST00000517417 GCHFRP30047 84 aa9.02□□□□□ -0.97
PCDHGA1-202ENST00000517417 SPATA45Q537H7 98 aa9.02□□□□□ -0.97
PCDHGA1-202ENST00000517417 GCSAMLQ5JQS6 135 aa9.02□□□□□ -0.97
PCDHGA1-202ENST00000517417 BEND2Q8NDZ0 799 aa9.02□□□□□ -0.97
PCDHGA1-202ENST00000517417 GTF3C1Q12789 2109 aa9.02□□□□□ -0.97
PCDHGA1-202ENST00000517417 SRSF6Q13247 344 aaKnown RBP9.01□□□□□ -0.97
PCDHGA1-202ENST00000517417 UNQ6494/PRO21346Q6UXR6 183 aa9.01□□□□□ -0.97
PCDHGA1-202ENST00000517417 BET1LQ9NYM9 111 aa9.01□□□□□ -0.97
PCDHGA1-202ENST00000517417 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.01□□□□□ -0.97
PCDHGA1-202ENST00000517417 SIAH2O43255 324 aa9.01□□□□□ -0.97
PCDHGA1-202ENST00000517417 IGHV3-23P01764 117 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms