RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 FAM216BQ8N7L0 139 aa5.42□□□□□ -1.54
CDH12-203ENST00000517378 C8orf31Q8N9H6 132 aa5.42□□□□□ -1.54
CDH12-203ENST00000517378 WIPF2Q8TF74 440 aaPredicted RBP5.42□□□□□ -1.54
CDH12-203ENST00000517378 FAM122AQ96E09 287 aa5.42□□□□□ -1.54
CDH12-203ENST00000517378 COMMD5Q9GZQ3 224 aa5.42□□□□□ -1.54
CDH12-203ENST00000517378 GNB4Q9HAV0 340 aa5.42□□□□□ -1.54
CDH12-203ENST00000517378 FRYQ5TBA9 3013 aa5.42□□□□□ -1.54
CDH12-203ENST00000517378 PCNX2A6NKB5 2137 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 H0YJW9 148 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 TCAPO15273 167 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 OR7C2O60412 319 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 HLA-DQA1P01909 254 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 AMY1AP04745 511 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 REG1AP05451 166 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 FRMD6-AS1P0C7T7 363 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 FTH1P19P0C7X4 201 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 BRS3P32247 399 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 SELENOVP59797 346 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 TMEM183BQ1AE95 376 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 TOMM20LQ6UXN7 152 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 FAM231DQ6ZW35 169 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 DOLPP1Q86YN1 238 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 ZADH2Q8N4Q0 377 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 Q8N976 141 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 OR9G1Q8NH87 305 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 TMEM167AQ8TBQ9 72 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 KCNS1Q96KK3 526 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 CCL13Q99616 98 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 HSPB9Q9BQS6 159 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 MIEN1Q9BRT3 115 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 GAL3ST2Q9H3Q3 398 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 A0A1W2PN81 502 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 F2Z2F3 143 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 GPX1P07203 203 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 CEACAM8P31997 349 aaPredicted RBP5.41□□□□□ -1.54
CDH12-203ENST00000517378 CDKN1AP38936 164 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 THAP8Q8NA92 274 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 MBD6Q96DN6 1003 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 HINT2Q9BX68 163 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 RNASE7Q9H1E1 156 aaKnown RBP5.41□□□□□ -1.54
CDH12-203ENST00000517378 ZFHX2Q9C0A1 2572 aaPredicted RBP5.41□□□□□ -1.54
CDH12-203ENST00000517378 GPR179Q6PRD1 2367 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 KNTC1P50748 2209 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 DYSFO75923 2080 aa5.41□□□□□ -1.54
CDH12-203ENST00000517378 RIF1Q5UIP0 2472 aaKnown RBP5.4□□□□□ -1.54
CDH12-203ENST00000517378 IZUMO1RA6ND01 250 aa5.4□□□□□ -1.54
CDH12-203ENST00000517378 NKX6-3A6NJ46 265 aa5.4□□□□□ -1.54
CDH12-203ENST00000517378 ZNF705FA8MVS1 300 aaPredicted RBP5.4□□□□□ -1.54
CDH12-203ENST00000517378 FSTL3O95633 263 aa5.4□□□□□ -1.54
CDH12-203ENST00000517378 APOA2P02652 100 aa5.4□□□□□ -1.54
CDH12-203ENST00000517378 ZNF705DP0CH99 300 aaPredicted RBP5.4□□□□□ -1.54
CDH12-203ENST00000517378 ZNF705BP0CI00 300 aaPredicted RBP5.4□□□□□ -1.54
CDH12-203ENST00000517378 USF1P22415 310 aaPredicted RBP5.4□□□□□ -1.54
CDH12-203ENST00000517378 CD40P25942 277 aa5.4□□□□□ -1.54
CDH12-203ENST00000517378 ZNF137PP52743 207 aa5.4□□□□□ -1.54
CDH12-203ENST00000517378 RPL8P62917 257 aaKnown RBP5.4□□□□□ -1.54
CDH12-203ENST00000517378 DEFB109BQ30KR1 87 aa5.4□□□□□ -1.54
CDH12-203ENST00000517378 IBA57Q5T440 356 aaKnown RBP5.4□□□□□ -1.54
CDH12-203ENST00000517378 PVRIGQ6DKI7 326 aa5.4□□□□□ -1.54
CDH12-203ENST00000517378 VHLLQ6RSH7 139 aa5.4□□□□□ -1.54
CDH12-203ENST00000517378 Q6ZS92 163 aa5.4□□□□□ -1.54
CDH12-203ENST00000517378 BAGE3Q86Y29 109 aa5.4□□□□□ -1.54
CDH12-203ENST00000517378 BAGE2Q86Y30 109 aa5.4□□□□□ -1.54
CDH12-203ENST00000517378 PDPNQ86YL7 162 aa5.4□□□□□ -1.54
CDH12-203ENST00000517378 LINC00311Q8N616 119 aa5.4□□□□□ -1.54
CDH12-203ENST00000517378 HARBI1Q96MB7 349 aa5.4□□□□□ -1.54
CDH12-203ENST00000517378 MRPL20Q9BYC9 149 aaKnown RBP5.4□□□□□ -1.54
CDH12-203ENST00000517378 EP300Q09472 2414 aaPredicted RBP5.4□□□□□ -1.54
CDH12-203ENST00000517378 CGB1A6NKQ9 187 aa5.4□□□□□ -1.55
CDH12-203ENST00000517378 BMPR1BO00238 502 aa5.4□□□□□ -1.55
CDH12-203ENST00000517378 IRF2P14316 349 aa5.4□□□□□ -1.55
CDH12-203ENST00000517378 GATA2P23769 480 aaPredicted RBP5.4□□□□□ -1.55
CDH12-203ENST00000517378 MORN5Q5VZ52 161 aa5.4□□□□□ -1.55
CDH12-203ENST00000517378 RPRMLQ8N4K4 120 aa5.4□□□□□ -1.55
CDH12-203ENST00000517378 OR10W1Q8NGF6 305 aa5.4□□□□□ -1.55
CDH12-203ENST00000517378 OR4B1Q8NGF8 309 aa5.4□□□□□ -1.55
CDH12-203ENST00000517378 VSTM2AQ8TAG5 236 aa5.4□□□□□ -1.55
CDH12-203ENST00000517378 SMIM12Q96EX1 92 aa5.4□□□□□ -1.55
CDH12-203ENST00000517378 PARD6AQ9NPB6 346 aa5.4□□□□□ -1.55
CDH12-203ENST00000517378 NAT8BQ9UHF3 227 aa5.4□□□□□ -1.55
CDH12-203ENST00000517378 FBXL7Q9UJT9 491 aa5.4□□□□□ -1.55
CDH12-203ENST00000517378 IGKV1D-37A0A075B6S9 117 aa5.39□□□□□ -1.55
CDH12-203ENST00000517378 FCN3O75636 299 aa5.39□□□□□ -1.55
CDH12-203ENST00000517378 IGLV2-23P01705 113 aa5.39□□□□□ -1.55
CDH12-203ENST00000517378 MYCNOSP40205 109 aa5.39□□□□□ -1.55
CDH12-203ENST00000517378 CTRLP40313 264 aa5.39□□□□□ -1.55
CDH12-203ENST00000517378 SUMO1P63165 101 aaKnown RBP5.39□□□□□ -1.55
CDH12-203ENST00000517378 UBE2L3P68036 154 aaKnown RBP5.39□□□□□ -1.55
CDH12-203ENST00000517378 ERHP84090 104 aaKnown RBP5.39□□□□□ -1.55
CDH12-203ENST00000517378 SIGLECL1Q8N7X8 197 aa5.39□□□□□ -1.55
CDH12-203ENST00000517378 OR1L4Q8NGR5 311 aa5.39□□□□□ -1.55
CDH12-203ENST00000517378 VAMP8Q9BV40 100 aa5.39□□□□□ -1.55
CDH12-203ENST00000517378 SAMD10Q9BYL1 202 aa5.39□□□□□ -1.55
CDH12-203ENST00000517378 C7orf69Q9H7B7 122 aa5.39□□□□□ -1.55
CDH12-203ENST00000517378 ZNF430Q9H8G1 570 aaPredicted RBP5.39□□□□□ -1.55
CDH12-203ENST00000517378 DNAJC4Q9NNZ3 241 aa5.39□□□□□ -1.55
CDH12-203ENST00000517378 ZNF586Q9NXT0 402 aa5.39□□□□□ -1.55
CDH12-203ENST00000517378 MRPL27Q9P0M9 148 aaKnown RBP5.39□□□□□ -1.55
CDH12-203ENST00000517378 ZNRD1Q9P1U0 126 aa5.39□□□□□ -1.55
CDH12-203ENST00000517378 A0A1W2PS18 150 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms