RNA–Protein interactions for RNA: ENST00000515452.1

NR1I3-233, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 2 BASIC

Gene NR1I3, Length 1,093 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-233	ENST00000515452	SULT1A3	P0DMM9	295 aa		5.99	□□□□□ -1.45
NR1I3-233	ENST00000515452	SULT1A4	P0DMN0	295 aa		5.99	□□□□□ -1.45
NR1I3-233	ENST00000515452	RNASE2	P10153	161 aa	Known RBP	5.99	□□□□□ -1.45
NR1I3-233	ENST00000515452	DEFA4	P12838	97 aa		5.99	□□□□□ -1.45
NR1I3-233	ENST00000515452	LYL1	P12980	280 aa		5.99	□□□□□ -1.45
NR1I3-233	ENST00000515452	MYCNOS	P40205	109 aa		5.99	□□□□□ -1.45
NR1I3-233	ENST00000515452	KRTAP10-11	P60412	298 aa		5.99	□□□□□ -1.45
NR1I3-233	ENST00000515452	SRPX	P78539	464 aa		5.99	□□□□□ -1.45
NR1I3-233	ENST00000515452	EXOSC2	Q13868	293 aa	Known RBP	5.99	□□□□□ -1.45
NR1I3-233	ENST00000515452	SMCO1	Q147U7	214 aa		5.99	□□□□□ -1.45
NR1I3-233	ENST00000515452	SLC25A24	Q6NUK1	477 aa		5.99	□□□□□ -1.45
NR1I3-233	ENST00000515452	NECAP1	Q8NC96	275 aa		5.99	□□□□□ -1.45
NR1I3-233	ENST00000515452	DUSP18	Q8NEJ0	188 aa		5.99	□□□□□ -1.45
NR1I3-233	ENST00000515452	OR1N2	Q8NGR9	330 aa		5.99	□□□□□ -1.45
NR1I3-233	ENST00000515452	MITD1	Q8WV92	249 aa		5.99	□□□□□ -1.45
NR1I3-233	ENST00000515452	TMEM170A	Q8WVE7	144 aa		5.99	□□□□□ -1.45
NR1I3-233	ENST00000515452	RCC1L	Q96I51	464 aa	Known RBP	5.99	□□□□□ -1.45
NR1I3-233	ENST00000515452	PLEKHA3	Q9HB20	300 aa		5.99	□□□□□ -1.45
NR1I3-233	ENST00000515452	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	5.99	□□□□□ -1.45
NR1I3-233	ENST00000515452	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452		A0A0G2JLM5	398 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452		A0A1B0GU03	582 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	RBMY1B	A6NDE4	496 aa	Known RBP	5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	RBMY1E	A6NEQ0	496 aa	Known RBP	5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452		A6NJY4	79 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	FAM223B	A6NKX1	122 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452		F8W735	103 aa	Predicted RBP	5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	INS-IGF2	F8WCM5	200 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452		K7EIM0	57 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	BMPR1B	O00238	502 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	IGHV3-48	P01763	117 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	HSPB1	P04792	205 aa	Known RBP	5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	RBMY1D	P0C7P1	496 aa	Known RBP	5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	EDN2	P20800	178 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	HOXA1	P49639	335 aa	Predicted RBP	5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	SPCS3	P61009	180 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	ATP5G2	Q06055	141 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	TNFRSF9	Q07011	255 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	ZNF616	Q08AN1	781 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	EGFEM1P	Q0D2K5	195 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	BSX	Q3C1V8	233 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	FAM223A	Q8IWN6	122 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	ZNF114	Q8NC26	417 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	OR52E5	Q8NH55	327 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	OR1S1	Q8NH92	325 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	ZNF431	Q8TF32	576 aa	Predicted RBP	5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	DCUN1D4	Q92564	292 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	DLX4	Q92988	240 aa	Predicted RBP	5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	MISP3	Q96FF7	219 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	ZNF414	Q96IQ9	312 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	USMG5	Q96IX5	58 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	OR10C1	Q96KK4	312 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	PDCD10	Q9BUL8	212 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	RBKS	Q9H477	322 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	ZC4H2	Q9NQZ6	224 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	MRPL36	Q9P0J6	103 aa	Known RBP	5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	HSPB7	Q9UBY9	170 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	ZMAT5	Q9UDW3	170 aa	Known RBP	5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	STAB2	Q8WWQ8	2551 aa		5.98	□□□□□ -1.45
NR1I3-233	ENST00000515452	CEBPZOS	A8MTT3	80 aa		5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452	INMT-MINDY4	F8WBC2	141 aa		5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452	LINC01619	G3V211	115 aa		5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452		I3L2K1	104 aa		5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452	IL5	P05113	134 aa		5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452	IAPP	P10997	89 aa		5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452	SLC25A6	P12236	298 aa		5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452	HIST1H1B	P16401	226 aa	Known RBP	5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452	HOXD3	P31249	432 aa	Predicted RBP	5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452	DEFA1	P59665	94 aa		5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452	DEFA3	P59666	94 aa		5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452	ERH	P84090	104 aa	Known RBP	5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452	MLANA	Q16655	118 aa		5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452	PVRIG	Q6DKI7	326 aa		5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452	CLEC19A	Q6UXS0	136 aa		5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452	OR4D5	Q8NGN0	318 aa		5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452	OR1P1	Q8NH06	330 aa		5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452	COQ8A	Q8NI60	647 aa		5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452	ZNF502	Q8TBZ5	544 aa		5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452	SCARB1	Q8WTV0	552 aa		5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452	DPF1	Q92782	380 aa		5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452	MARVELD1	Q9BSK0	173 aa		5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452	GPR61	Q9BZJ8	451 aa		5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452	MAGT1	Q9H0U3	335 aa		5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452	FNDC4	Q9H6D8	234 aa	Predicted RBP	5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452	PEF1	Q9UBV8	284 aa	Known RBP	5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452	TMED3	Q9Y3Q3	217 aa		5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452	HERC2	O95714	4834 aa		5.97	□□□□□ -1.45
NR1I3-233	ENST00000515452	PCLO	Q9Y6V0	5065 aa		5.96	□□□□□ -1.45
NR1I3-233	ENST00000515452	RYR1	P21817	5038 aa		5.96	□□□□□ -1.46
NR1I3-233	ENST00000515452	DHFR	P00374	187 aa		5.96	□□□□□ -1.46
NR1I3-233	ENST00000515452	MT-CO2	P00403	227 aa		5.96	□□□□□ -1.46
NR1I3-233	ENST00000515452	OR8U8	P0C7N1	319 aa		5.96	□□□□□ -1.46
NR1I3-233	ENST00000515452	GPR183	P32249	361 aa		5.96	□□□□□ -1.46
NR1I3-233	ENST00000515452	PLET1	Q6UQ28	207 aa		5.96	□□□□□ -1.46
NR1I3-233	ENST00000515452	HAPLN4	Q86UW8	402 aa		5.96	□□□□□ -1.46
NR1I3-233	ENST00000515452	C12orf45	Q8N5I9	185 aa	Predicted RBP	5.96	□□□□□ -1.46
NR1I3-233	ENST00000515452	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	5.96	□□□□□ -1.46
NR1I3-233	ENST00000515452	UXS1	Q8NBZ7	420 aa		5.96	□□□□□ -1.46
NR1I3-233	ENST00000515452	SLC24A4	Q8NFF2	622 aa		5.96	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms