RNA–Protein interactions for RNA: ENST00000515145.1

TNFRSF25-220, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 4

Gene TNFRSF25, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-220ENST00000515145 ZNF486Q96H40 463 aaPredicted RBP12.16□□□□□ -0.46
TNFRSF25-220ENST00000515145 EXTL2Q9UBQ6 330 aa12.16□□□□□ -0.46
TNFRSF25-220ENST00000515145 OR4C46A6NHA9 309 aa12.15□□□□□ -0.46
TNFRSF25-220ENST00000515145 NUPL2O15504 423 aaKnown RBP12.15□□□□□ -0.46
TNFRSF25-220ENST00000515145 JTBO76095 146 aa12.15□□□□□ -0.46
TNFRSF25-220ENST00000515145 IGKV1-5P01602 117 aa12.15□□□□□ -0.46
TNFRSF25-220ENST00000515145 CD3DP04234 171 aa12.15□□□□□ -0.46
TNFRSF25-220ENST00000515145 CTSDP07339 412 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF25-220ENST00000515145 TBPP20226 339 aa12.15□□□□□ -0.46
TNFRSF25-220ENST00000515145 MFAP4P55083 255 aa12.15□□□□□ -0.46
TNFRSF25-220ENST00000515145 PIGPP57054 158 aa12.15□□□□□ -0.46
TNFRSF25-220ENST00000515145 TP53RKQ96S44 253 aa12.15□□□□□ -0.46
TNFRSF25-220ENST00000515145 TXN2Q99757 166 aa12.15□□□□□ -0.46
TNFRSF25-220ENST00000515145 MTFP1Q9UDX5 166 aa12.15□□□□□ -0.46
TNFRSF25-220ENST00000515145 SMPXQ9UHP9 88 aa12.15□□□□□ -0.46
TNFRSF25-220ENST00000515145 IGHV7-4-1A0A0J9YVY3 117 aa12.14□□□□□ -0.47
TNFRSF25-220ENST00000515145 PPP5CP53041 499 aa12.14□□□□□ -0.47
TNFRSF25-220ENST00000515145 APOC4P55056 127 aa12.14□□□□□ -0.47
TNFRSF25-220ENST00000515145 SPINK9Q5DT21 86 aa12.14□□□□□ -0.47
TNFRSF25-220ENST00000515145 OR4D10Q8NGI6 311 aa12.14□□□□□ -0.47
TNFRSF25-220ENST00000515145 OR10C1Q96KK4 312 aa12.14□□□□□ -0.47
TNFRSF25-220ENST00000515145 ABHD1Q96SE0 405 aa12.14□□□□□ -0.47
TNFRSF25-220ENST00000515145 RNF2Q99496 336 aa12.14□□□□□ -0.47
TNFRSF25-220ENST00000515145 CHEK1O14757 476 aa12.13□□□□□ -0.47
TNFRSF25-220ENST00000515145 IGHV3-48P01763 117 aa12.13□□□□□ -0.47
TNFRSF25-220ENST00000515145 CD74P04233 296 aa12.13□□□□□ -0.47
TNFRSF25-220ENST00000515145 AKR1C2P52895 323 aa12.13□□□□□ -0.47
TNFRSF25-220ENST00000515145 ERHP84090 104 aaKnown RBP12.13□□□□□ -0.47
TNFRSF25-220ENST00000515145 DEFB135Q30KP9 77 aa12.13□□□□□ -0.47
TNFRSF25-220ENST00000515145 Q6ZWC4 215 aa12.13□□□□□ -0.47
TNFRSF25-220ENST00000515145 WFDC3Q8IUB2 231 aa12.13□□□□□ -0.47
TNFRSF25-220ENST00000515145 TMEM116Q8NCL8 245 aa12.13□□□□□ -0.47
TNFRSF25-220ENST00000515145 PINX1Q96BK5 328 aaKnown RBP12.13□□□□□ -0.47
TNFRSF25-220ENST00000515145 RHPN1-AS1Q9BWJ2 59 aa12.13□□□□□ -0.47
TNFRSF25-220ENST00000515145 MIXL1Q9H2W2 232 aa12.13□□□□□ -0.47
TNFRSF25-220ENST00000515145 PTTG2Q9NZH5 202 aa12.13□□□□□ -0.47
TNFRSF25-220ENST00000515145 TP53TG1Q9Y2A0 90 aa12.13□□□□□ -0.47
TNFRSF25-220ENST00000515145 IGHV3-49A0A0A0MS15 119 aa12.12□□□□□ -0.47
TNFRSF25-220ENST00000515145 A0A0B4J293 547 aa12.12□□□□□ -0.47
TNFRSF25-220ENST00000515145 KIR2DL5BA0A0G2JN68 375 aa12.12□□□□□ -0.47
TNFRSF25-220ENST00000515145 KIR2DL5BA0A0G2JPC4 375 aa12.12□□□□□ -0.47
TNFRSF25-220ENST00000515145 INS-IGF2F8WCM5 200 aa12.12□□□□□ -0.47
TNFRSF25-220ENST00000515145 YIF1AO95070 293 aa12.12□□□□□ -0.47
TNFRSF25-220ENST00000515145 KIR2DL5AQ8N109 375 aa12.12□□□□□ -0.47
TNFRSF25-220ENST00000515145 SLC35G3Q8N808 338 aa12.12□□□□□ -0.47
TNFRSF25-220ENST00000515145 KIR2DL5BQ8NHK3 375 aa12.12□□□□□ -0.47
TNFRSF25-220ENST00000515145 A0A0G2JRQ6 117 aa12.11□□□□□ -0.47
TNFRSF25-220ENST00000515145 C3orf85A0A1B0GTC6 90 aa12.11□□□□□ -0.47
TNFRSF25-220ENST00000515145 UBE2CO00762 179 aa12.11□□□□□ -0.47
TNFRSF25-220ENST00000515145 ST8SIA3O43173 380 aa12.11□□□□□ -0.47
TNFRSF25-220ENST00000515145 SPRY2O43597 315 aa12.11□□□□□ -0.47
TNFRSF25-220ENST00000515145 GNG7O60262 68 aa12.11□□□□□ -0.47
TNFRSF25-220ENST00000515145 TAS2R19P59542 299 aa12.11□□□□□ -0.47
TNFRSF25-220ENST00000515145 PVRIGQ6DKI7 326 aa12.11□□□□□ -0.47
TNFRSF25-220ENST00000515145 CCDC71LQ8N9Z2 235 aa12.11□□□□□ -0.47
TNFRSF25-220ENST00000515145 TMEM229BQ8NBD8 167 aa12.11□□□□□ -0.47
TNFRSF25-220ENST00000515145 OR13C8Q8NGS7 320 aa12.11□□□□□ -0.47
TNFRSF25-220ENST00000515145 TERB2Q8NHR7 220 aa12.11□□□□□ -0.47
TNFRSF25-220ENST00000515145 C15orf40Q8WUR7 153 aa12.11□□□□□ -0.47
TNFRSF25-220ENST00000515145 COPZ2Q9P299 210 aa12.11□□□□□ -0.47
TNFRSF25-220ENST00000515145 IGHV3OR16-13A0A075B7E8 117 aa12.1□□□□□ -0.47
TNFRSF25-220ENST00000515145 IGHV3-74A0A0B4J1X5 117 aa12.1□□□□□ -0.47
TNFRSF25-220ENST00000515145 A0A0J9YWU9 116 aa12.1□□□□□ -0.47
TNFRSF25-220ENST00000515145 ATG12O94817 140 aa12.1□□□□□ -0.47
TNFRSF25-220ENST00000515145 RAB3DO95716 219 aa12.1□□□□□ -0.47
TNFRSF25-220ENST00000515145 RNASE2P10153 161 aaKnown RBP12.1□□□□□ -0.47
TNFRSF25-220ENST00000515145 RPL35AP18077 110 aaKnown RBP12.1□□□□□ -0.47
TNFRSF25-220ENST00000515145 UCP1P25874 307 aa12.1□□□□□ -0.47
TNFRSF25-220ENST00000515145 BMI1P35226 326 aa12.1□□□□□ -0.47
TNFRSF25-220ENST00000515145 EWSR1Q01844 656 aaKnown RBP eCLIP12.1□□□□□ -0.47
TNFRSF25-220ENST00000515145 TNFRSF9Q07011 255 aa12.1□□□□□ -0.47
TNFRSF25-220ENST00000515145 TRIM16LQ309B1 348 aa12.1□□□□□ -0.47
TNFRSF25-220ENST00000515145 SP6Q3SY56 376 aa12.1□□□□□ -0.47
TNFRSF25-220ENST00000515145 FAM90A2PQ658T7 463 aa12.1□□□□□ -0.47
TNFRSF25-220ENST00000515145 LYG2Q86SG7 212 aa12.1□□□□□ -0.47
TNFRSF25-220ENST00000515145 ZFAND1Q8TCF1 268 aa12.1□□□□□ -0.47
TNFRSF25-220ENST00000515145 GALNT14Q96FL9 552 aa12.1□□□□□ -0.47
TNFRSF25-220ENST00000515145 TRAV14DV4A0A0A6YYC5 116 aa12.09□□□□□ -0.47
TNFRSF25-220ENST00000515145 GABARAPH6UMI1 98 aa12.09□□□□□ -0.47
TNFRSF25-220ENST00000515145 IFNA17P01571 189 aa12.09□□□□□ -0.47
TNFRSF25-220ENST00000515145 SNCAP37840 140 aa12.09□□□□□ -0.47
TNFRSF25-220ENST00000515145 NPBWR1P48145 328 aa12.09□□□□□ -0.47
TNFRSF25-220ENST00000515145 TFPI2P48307 235 aa12.09□□□□□ -0.47
TNFRSF25-220ENST00000515145 SCGB2B2Q4G0G5 96 aa12.09□□□□□ -0.47
TNFRSF25-220ENST00000515145 STEAP1BQ6NZ63 245 aa12.09□□□□□ -0.47
TNFRSF25-220ENST00000515145 TOMM20LQ6UXN7 152 aa12.09□□□□□ -0.47
TNFRSF25-220ENST00000515145 APRG1Q8IVJ8 170 aa12.09□□□□□ -0.47
TNFRSF25-220ENST00000515145 STPG3Q8N7X2 389 aa12.09□□□□□ -0.47
TNFRSF25-220ENST00000515145 DUSP18Q8NEJ0 188 aa12.09□□□□□ -0.47
TNFRSF25-220ENST00000515145 MARCH1Q8TCQ1 289 aa12.09□□□□□ -0.47
TNFRSF25-220ENST00000515145 RNF183Q96D59 192 aa12.09□□□□□ -0.47
TNFRSF25-220ENST00000515145 GINS3Q9BRX5 216 aa12.09□□□□□ -0.47
TNFRSF25-220ENST00000515145 ZFAND3Q9H8U3 227 aa12.09□□□□□ -0.47
TNFRSF25-220ENST00000515145 MAP6D1Q9H9H5 199 aa12.09□□□□□ -0.47
TNFRSF25-220ENST00000515145 IGKV3-7A0A075B6H7 116 aa12.08□□□□□ -0.48
TNFRSF25-220ENST00000515145 CTDSP2O14595 271 aa12.08□□□□□ -0.48
TNFRSF25-220ENST00000515145 ETV6P41212 452 aa12.08□□□□□ -0.48
TNFRSF25-220ENST00000515145 HOXA1P49639 335 aaPredicted RBP12.08□□□□□ -0.48
TNFRSF25-220ENST00000515145 SSBP1Q04837 148 aaKnown RBP12.08□□□□□ -0.48
TNFRSF25-220ENST00000515145 ZNF124Q15973 351 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms