RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 SORL1Q92673 2214 aa8.36□□□□□ -1.07
UBE2D3-232ENST00000514755 IGHV3-35A0A0C4DH35 117 aa8.36□□□□□ -1.07
UBE2D3-232ENST00000514755 K7EIM0 57 aa8.36□□□□□ -1.07
UBE2D3-232ENST00000514755 GGCTO75223 188 aaKnown RBP8.36□□□□□ -1.07
UBE2D3-232ENST00000514755 CLEC3BP05452 202 aa8.36□□□□□ -1.07
UBE2D3-232ENST00000514755 GP9P14770 177 aa8.36□□□□□ -1.07
UBE2D3-232ENST00000514755 AKR1C4P17516 323 aa8.36□□□□□ -1.07
UBE2D3-232ENST00000514755 GPR183P32249 361 aa8.36□□□□□ -1.07
UBE2D3-232ENST00000514755 TMEM187Q14656 261 aa8.36□□□□□ -1.07
UBE2D3-232ENST00000514755 SPANXN2Q5MJ10 180 aa8.36□□□□□ -1.07
UBE2D3-232ENST00000514755 TMEM268Q5VZI3 342 aa8.36□□□□□ -1.07
UBE2D3-232ENST00000514755 HSD17B13Q7Z5P4 300 aaPredicted RBP8.36□□□□□ -1.07
UBE2D3-232ENST00000514755 SCARB1Q8WTV0 552 aa8.36□□□□□ -1.07
UBE2D3-232ENST00000514755 GPR146Q96CH1 333 aa8.36□□□□□ -1.07
UBE2D3-232ENST00000514755 ZNF414Q96IQ9 312 aa8.36□□□□□ -1.07
UBE2D3-232ENST00000514755 CXorf58Q96LI9 332 aa8.36□□□□□ -1.07
UBE2D3-232ENST00000514755 ELOVL1Q9BW60 279 aa8.36□□□□□ -1.07
UBE2D3-232ENST00000514755 KRTAP4-8Q9BYQ9 185 aa8.36□□□□□ -1.07
UBE2D3-232ENST00000514755 NDUFA13Q9P0J0 144 aa8.36□□□□□ -1.07
UBE2D3-232ENST00000514755 SELENOKQ9Y6D0 94 aa8.36□□□□□ -1.07
UBE2D3-232ENST00000514755 TGP01266 2768 aa8.35□□□□□ -1.07
UBE2D3-232ENST00000514755 TRBV7-1A0A0A6YYK4 115 aa8.35□□□□□ -1.07
UBE2D3-232ENST00000514755 IZUMO1RA6ND01 250 aa8.35□□□□□ -1.07
UBE2D3-232ENST00000514755 B3GALNT1O75752 331 aa8.35□□□□□ -1.07
UBE2D3-232ENST00000514755 IGHV3-48P01763 117 aa8.35□□□□□ -1.07
UBE2D3-232ENST00000514755 DHODHQ02127 395 aa8.35□□□□□ -1.07
UBE2D3-232ENST00000514755 TATDN3Q17R31 274 aa8.35□□□□□ -1.07
UBE2D3-232ENST00000514755 ZNF57Q68EA5 555 aaPredicted RBP8.35□□□□□ -1.07
UBE2D3-232ENST00000514755 C11orf87Q6NUJ2 197 aa8.35□□□□□ -1.07
UBE2D3-232ENST00000514755 UNQ9165/PRO28630Q6UXU0 137 aa8.35□□□□□ -1.07
UBE2D3-232ENST00000514755 SGPP2Q8IWX5 399 aa8.35□□□□□ -1.07
UBE2D3-232ENST00000514755 SLC35G3Q8N808 338 aa8.35□□□□□ -1.07
UBE2D3-232ENST00000514755 CACNG8Q8WXS5 425 aa8.35□□□□□ -1.07
UBE2D3-232ENST00000514755 RBPMSQ93062 196 aaKnown RBP8.35□□□□□ -1.07
UBE2D3-232ENST00000514755 RRNAD1Q96FB5 475 aaKnown RBP8.35□□□□□ -1.07
UBE2D3-232ENST00000514755 GALNT14Q96FL9 552 aa8.35□□□□□ -1.07
UBE2D3-232ENST00000514755 PLEKHA3Q9HB20 300 aa8.35□□□□□ -1.07
UBE2D3-232ENST00000514755 THYN1Q9P016 225 aa8.35□□□□□ -1.07
UBE2D3-232ENST00000514755 ZMAT5Q9UDW3 170 aaKnown RBP8.35□□□□□ -1.07
UBE2D3-232ENST00000514755 TMEM56-RWDD3S4R434 201 aa8.35□□□□□ -1.07
UBE2D3-232ENST00000514755 LINC00854A0A1B0GVQ3 168 aa8.34□□□□□ -1.07
UBE2D3-232ENST00000514755 OR2T8A6NH00 312 aa8.34□□□□□ -1.07
UBE2D3-232ENST00000514755 I3L2K1 104 aa8.34□□□□□ -1.07
UBE2D3-232ENST00000514755 TGOLN2O43493 480 aa8.34□□□□□ -1.07
UBE2D3-232ENST00000514755 NXPH3O95157 252 aa8.34□□□□□ -1.07
UBE2D3-232ENST00000514755 IFNA17P01571 189 aa8.34□□□□□ -1.07
UBE2D3-232ENST00000514755 FAUP35544 74 aaKnown RBP8.34□□□□□ -1.07
UBE2D3-232ENST00000514755 CCR6P51684 374 aa8.34□□□□□ -1.07
UBE2D3-232ENST00000514755 AP3S2P59780 193 aa8.34□□□□□ -1.07
UBE2D3-232ENST00000514755 FAM209BQ5JX69 171 aa8.34□□□□□ -1.07
UBE2D3-232ENST00000514755 TMED4Q7Z7H5 227 aa8.34□□□□□ -1.07
UBE2D3-232ENST00000514755 GPHB5Q86YW7 130 aa8.34□□□□□ -1.07
UBE2D3-232ENST00000514755 ZNF114Q8NC26 417 aa8.34□□□□□ -1.07
UBE2D3-232ENST00000514755 OR1P1Q8NH06 330 aa8.34□□□□□ -1.07
UBE2D3-232ENST00000514755 RNASE11Q8TAA1 199 aaKnown RBP8.34□□□□□ -1.07
UBE2D3-232ENST00000514755 VN1R17PQ8TDU5 208 aa8.34□□□□□ -1.07
UBE2D3-232ENST00000514755 SCGB3A2Q96PL1 93 aa8.34□□□□□ -1.07
UBE2D3-232ENST00000514755 CHRDL1Q9BU40 450 aa8.34□□□□□ -1.07
UBE2D3-232ENST00000514755 C21orf62Q9NYP8 219 aa8.34□□□□□ -1.07
UBE2D3-232ENST00000514755 SIGLEC8Q9NYZ4 499 aa8.34□□□□□ -1.07
UBE2D3-232ENST00000514755 CACNG5Q9UF02 275 aa8.34□□□□□ -1.07
UBE2D3-232ENST00000514755 HUWE1Q7Z6Z7 4374 aaKnown RBP8.34□□□□□ -1.07
UBE2D3-232ENST00000514755 TMEM213A2RRL7 107 aa8.33□□□□□ -1.08
UBE2D3-232ENST00000514755 C2orf70A6NJV1 201 aa8.33□□□□□ -1.08
UBE2D3-232ENST00000514755 LGALS9O00182 355 aa8.33□□□□□ -1.08
UBE2D3-232ENST00000514755 ATG12O94817 140 aa8.33□□□□□ -1.08
UBE2D3-232ENST00000514755 MT-CO2P00403 227 aa8.33□□□□□ -1.08
UBE2D3-232ENST00000514755 ERHP84090 104 aaKnown RBP8.33□□□□□ -1.08
UBE2D3-232ENST00000514755 CD300EQ496F6 205 aaPredicted RBP8.33□□□□□ -1.08
UBE2D3-232ENST00000514755 AARDQ4LEZ3 155 aa8.33□□□□□ -1.08
UBE2D3-232ENST00000514755 PLET1Q6UQ28 207 aa8.33□□□□□ -1.08
UBE2D3-232ENST00000514755 LYZL2Q7Z4W2 148 aa8.33□□□□□ -1.08
UBE2D3-232ENST00000514755 FAM219AQ8IW50 185 aa8.33□□□□□ -1.08
UBE2D3-232ENST00000514755 UBAC2Q8NBM4 344 aa8.33□□□□□ -1.08
UBE2D3-232ENST00000514755 PINX1Q96BK5 328 aaKnown RBP8.33□□□□□ -1.08
UBE2D3-232ENST00000514755 PEMTQ9UBM1 199 aa8.33□□□□□ -1.08
UBE2D3-232ENST00000514755 KCNIP3Q9Y2W7 256 aa8.33□□□□□ -1.08
UBE2D3-232ENST00000514755 IGHV3OR16-8A0A075B7F1 116 aa8.32□□□□□ -1.08
UBE2D3-232ENST00000514755 ZNF320A2RRD8 509 aa8.32□□□□□ -1.08
UBE2D3-232ENST00000514755 INS-IGF2F8WCM5 200 aa8.32□□□□□ -1.08
UBE2D3-232ENST00000514755 RNASE2P10153 161 aaKnown RBP8.32□□□□□ -1.08
UBE2D3-232ENST00000514755 IL7P13232 177 aa8.32□□□□□ -1.08
UBE2D3-232ENST00000514755 FOLR2P14207 255 aa8.32□□□□□ -1.08
UBE2D3-232ENST00000514755 BTCP35070 178 aa8.32□□□□□ -1.08
UBE2D3-232ENST00000514755 HOXA1P49639 335 aaPredicted RBP8.32□□□□□ -1.08
UBE2D3-232ENST00000514755 ANKRD55Q3KP44 614 aa8.32□□□□□ -1.08
UBE2D3-232ENST00000514755 Q56UQ5 140 aa8.32□□□□□ -1.08
UBE2D3-232ENST00000514755 NMSQ5H8A3 153 aa8.32□□□□□ -1.08
UBE2D3-232ENST00000514755 TRIQKQ629K1 86 aa8.32□□□□□ -1.08
UBE2D3-232ENST00000514755 PVRIGQ6DKI7 326 aa8.32□□□□□ -1.08
UBE2D3-232ENST00000514755 OR1L6Q8NGR2 347 aa8.32□□□□□ -1.08
UBE2D3-232ENST00000514755 IL22RA2Q969J5 263 aa8.32□□□□□ -1.08
UBE2D3-232ENST00000514755 C16orf92Q96LL3 132 aa8.32□□□□□ -1.08
UBE2D3-232ENST00000514755 B9D2Q9BPU9 175 aa8.32□□□□□ -1.08
UBE2D3-232ENST00000514755 PDCD10Q9BUL8 212 aa8.32□□□□□ -1.08
UBE2D3-232ENST00000514755 ZNF436Q9C0F3 470 aaPredicted RBP8.32□□□□□ -1.08
UBE2D3-232ENST00000514755 MRPL36Q9P0J6 103 aaKnown RBP8.32□□□□□ -1.08
UBE2D3-232ENST00000514755 FLVCR2Q9UPI3 526 aa8.32□□□□□ -1.08
UBE2D3-232ENST00000514755 A8MWP6 167 aa8.31□□□□□ -1.08
UBE2D3-232ENST00000514755 CYB5BO43169 146 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms