RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 C15orf32Q32M92 178 aa7.58□□□□□ -1.2
TOPBP1-209ENST00000513818 AARDQ4LEZ3 155 aa7.58□□□□□ -1.2
TOPBP1-209ENST00000513818 SLC25A24Q6NUK1 477 aa7.58□□□□□ -1.2
TOPBP1-209ENST00000513818 C4orf3Q8WVX3 66 aa7.58□□□□□ -1.2
TOPBP1-209ENST00000513818 PINX1Q96BK5 328 aaKnown RBP7.58□□□□□ -1.2
TOPBP1-209ENST00000513818 MISP3Q96FF7 219 aa7.58□□□□□ -1.2
TOPBP1-209ENST00000513818 RAX2Q96IS3 184 aa7.58□□□□□ -1.2
TOPBP1-209ENST00000513818 UBE2E2Q96LR5 201 aa7.58□□□□□ -1.2
TOPBP1-209ENST00000513818 SRSF8Q9BRL6 282 aaKnown RBP7.58□□□□□ -1.2
TOPBP1-209ENST00000513818 ENY2Q9NPA8 101 aa7.58□□□□□ -1.2
TOPBP1-209ENST00000513818 ZC4H2Q9NQZ6 224 aa7.58□□□□□ -1.2
TOPBP1-209ENST00000513818 TRBV9A0A0B4J1U6 114 aa7.57□□□□□ -1.2
TOPBP1-209ENST00000513818 I3L521 148 aa7.57□□□□□ -1.2
TOPBP1-209ENST00000513818 GOSR2O14653 212 aa7.57□□□□□ -1.2
TOPBP1-209ENST00000513818 SIX6O95475 246 aa7.57□□□□□ -1.2
TOPBP1-209ENST00000513818 DHFRP00374 187 aa7.57□□□□□ -1.2
TOPBP1-209ENST00000513818 IFNA21P01568 189 aa7.57□□□□□ -1.2
TOPBP1-209ENST00000513818 RNASE2P10153 161 aaKnown RBP7.57□□□□□ -1.2
TOPBP1-209ENST00000513818 SLURP1P55000 103 aa7.57□□□□□ -1.2
TOPBP1-209ENST00000513818 ERHP84090 104 aaKnown RBP7.57□□□□□ -1.2
TOPBP1-209ENST00000513818 TATDN3Q17R31 274 aa7.57□□□□□ -1.2
TOPBP1-209ENST00000513818 RGS21Q2M5E4 152 aa7.57□□□□□ -1.2
TOPBP1-209ENST00000513818 IAH1Q2TAA2 248 aaPredicted RBP7.57□□□□□ -1.2
TOPBP1-209ENST00000513818 TOR2AQ5JU69 321 aa7.57□□□□□ -1.2
TOPBP1-209ENST00000513818 HSD17B13Q7Z5P4 300 aaPredicted RBP7.57□□□□□ -1.2
TOPBP1-209ENST00000513818 ZBTB8BQ8NAP8 495 aaPredicted RBP7.57□□□□□ -1.2
TOPBP1-209ENST00000513818 OR11H1Q8NG94 326 aa7.57□□□□□ -1.2
TOPBP1-209ENST00000513818 OR52E5Q8NH55 327 aa7.57□□□□□ -1.2
TOPBP1-209ENST00000513818 DTD1Q8TEA8 209 aa7.57□□□□□ -1.2
TOPBP1-209ENST00000513818 GPN1Q9HCN4 374 aaPredicted RBP7.57□□□□□ -1.2
TOPBP1-209ENST00000513818 HEYLQ9NQ87 328 aaPredicted RBP7.57□□□□□ -1.2
TOPBP1-209ENST00000513818 GSKIPQ9P0R6 139 aa7.57□□□□□ -1.2
TOPBP1-209ENST00000513818 HSPB7Q9UBY9 170 aa7.57□□□□□ -1.2
TOPBP1-209ENST00000513818 ALG5Q9Y673 324 aa7.57□□□□□ -1.2
TOPBP1-209ENST00000513818 C5orf51A6NDU8 294 aa7.56□□□□□ -1.2
TOPBP1-209ENST00000513818 FAM223BA6NKX1 122 aa7.56□□□□□ -1.2
TOPBP1-209ENST00000513818 PPP5D1E7EU14 171 aa7.56□□□□□ -1.2
TOPBP1-209ENST00000513818 H3BP45 60 aa7.56□□□□□ -1.2
TOPBP1-209ENST00000513818 K7EIM0 57 aa7.56□□□□□ -1.2
TOPBP1-209ENST00000513818 CCL24O00175 119 aa7.56□□□□□ -1.2
TOPBP1-209ENST00000513818 WRBO00258 174 aa7.56□□□□□ -1.2
TOPBP1-209ENST00000513818 SSSCA1O60232 199 aa7.56□□□□□ -1.2
TOPBP1-209ENST00000513818 PRAF2O60831 178 aa7.56□□□□□ -1.2
TOPBP1-209ENST00000513818 POLR2GP62487 172 aaKnown RBP eCLIP7.56□□□□□ -1.2
TOPBP1-209ENST00000513818 ATP5G2Q06055 141 aa7.56□□□□□ -1.2
TOPBP1-209ENST00000513818 FAM223AQ8IWN6 122 aa7.56□□□□□ -1.2
TOPBP1-209ENST00000513818 ZNF114Q8NC26 417 aa7.56□□□□□ -1.2
TOPBP1-209ENST00000513818 NECAP1Q8NC96 275 aa7.56□□□□□ -1.2
TOPBP1-209ENST00000513818 SLC24A4Q8NFF2 622 aa7.56□□□□□ -1.2
TOPBP1-209ENST00000513818 OR4F17Q8NGA8 305 aa7.56□□□□□ -1.2
TOPBP1-209ENST00000513818 OR4D5Q8NGN0 318 aa7.56□□□□□ -1.2
TOPBP1-209ENST00000513818 OR1N2Q8NGR9 330 aa7.56□□□□□ -1.2
TOPBP1-209ENST00000513818 TMEM170AQ8WVE7 144 aa7.56□□□□□ -1.2
TOPBP1-209ENST00000513818 OR4F4Q96R69 305 aa7.56□□□□□ -1.2
TOPBP1-209ENST00000513818 WNK1Q9H4A3 2382 aa7.56□□□□□ -1.2
TOPBP1-209ENST00000513818 PIGBOS1A0A0B4J2F0 54 aa7.55□□□□□ -1.2
TOPBP1-209ENST00000513818 A0A0G2JLM5 398 aa7.55□□□□□ -1.2
TOPBP1-209ENST00000513818 C7orf66A4D0T2 115 aa7.55□□□□□ -1.2
TOPBP1-209ENST00000513818 SNRPGP15A8MWD9 76 aa7.55□□□□□ -1.2
TOPBP1-209ENST00000513818 SSNA1O43805 119 aa7.55□□□□□ -1.2
TOPBP1-209ENST00000513818 BRI3O95415 125 aa7.55□□□□□ -1.2
TOPBP1-209ENST00000513818 MT-CO2P00403 227 aa7.55□□□□□ -1.2
TOPBP1-209ENST00000513818 SLC25A6P12236 298 aa7.55□□□□□ -1.2
TOPBP1-209ENST00000513818 HIST1H1BP16401 226 aaKnown RBP7.55□□□□□ -1.2
TOPBP1-209ENST00000513818 GPR183P32249 361 aa7.55□□□□□ -1.2
TOPBP1-209ENST00000513818 SNCAP37840 140 aa7.55□□□□□ -1.2
TOPBP1-209ENST00000513818 NKX2-1P43699 371 aaPredicted RBP7.55□□□□□ -1.2
TOPBP1-209ENST00000513818 PDLIM3Q53GG5 364 aaPredicted RBP7.55□□□□□ -1.2
TOPBP1-209ENST00000513818 PRR31Q5SQ13 230 aa7.55□□□□□ -1.2
TOPBP1-209ENST00000513818 ZNF343Q6P1L6 599 aa7.55□□□□□ -1.2
TOPBP1-209ENST00000513818 CLEC19AQ6UXS0 136 aa7.55□□□□□ -1.2
TOPBP1-209ENST00000513818 LINC00482Q8N8I6 264 aa7.55□□□□□ -1.2
TOPBP1-209ENST00000513818 UBAC2Q8NBM4 344 aa7.55□□□□□ -1.2
TOPBP1-209ENST00000513818 OR1P1Q8NH06 330 aa7.55□□□□□ -1.2
TOPBP1-209ENST00000513818 USMG5Q96IX5 58 aa7.55□□□□□ -1.2
TOPBP1-209ENST00000513818 MRPL36Q9P0J6 103 aaKnown RBP7.55□□□□□ -1.2
TOPBP1-209ENST00000513818 PAIP2BQ9ULR5 123 aaKnown RBP7.55□□□□□ -1.2
TOPBP1-209ENST00000513818 IGHV3-35A0A0C4DH35 117 aa7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 INS-IGF2F8WCM5 200 aa7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 LINC01619G3V211 115 aa7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 I3L2K1 104 aa7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 BMPR1BO00238 502 aa7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 SYNGR2O43760 224 aa7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 IFNA10P01566 189 aa7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 NPY1RP25929 384 aa7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 HOXD3P31249 432 aaPredicted RBP7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 MYCNOSP40205 109 aa7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 HTR2BP41595 481 aa7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 RUNX1Q01196 453 aa7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 ID3Q02535 119 aa7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 ZNF616Q08AN1 781 aa7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 FHL3Q13643 280 aa7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 PMS2P11Q13670 270 aa7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 OXA1LQ15070 435 aa7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 MLANAQ16655 118 aa7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 BSXQ3C1V8 233 aa7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 ZNF502Q8TBZ5 544 aa7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 SCARB1Q8WTV0 552 aa7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 DPF1Q92782 380 aa7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 EEF1AKMT3Q96AZ1 226 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms