RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 ZBTB8BQ8NAP8 495 aaPredicted RBP16.22■□□□□ 0.19
NEIL3-202ENST00000513321 OR4D5Q8NGN0 318 aa16.22■□□□□ 0.19
NEIL3-202ENST00000513321 EEF1AKMT3Q96AZ1 226 aa16.22■□□□□ 0.19
NEIL3-202ENST00000513321 CXorf58Q96LI9 332 aa16.22■□□□□ 0.19
NEIL3-202ENST00000513321 RANGRFQ9HD47 186 aaPredicted RBP16.22■□□□□ 0.19
NEIL3-202ENST00000513321 PEF1Q9UBV8 284 aaKnown RBP16.22■□□□□ 0.19
NEIL3-202ENST00000513321 TRRAPQ9Y4A5 3859 aa16.21■□□□□ 0.19
NEIL3-202ENST00000513321 IGHV3-21A0A0B4J1V1 117 aa16.21■□□□□ 0.19
NEIL3-202ENST00000513321 MED6O75586 246 aa16.21■□□□□ 0.19
NEIL3-202ENST00000513321 FHL3Q13643 280 aa16.21■□□□□ 0.19
NEIL3-202ENST00000513321 TATDN3Q17R31 274 aa16.21■□□□□ 0.19
NEIL3-202ENST00000513321 VN1R17PQ8TDU5 208 aa16.21■□□□□ 0.19
NEIL3-202ENST00000513321 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.2■□□□□ 0.18
NEIL3-202ENST00000513321 LINC01619G3V211 115 aa16.2■□□□□ 0.18
NEIL3-202ENST00000513321 SYNGR2O43760 224 aa16.2■□□□□ 0.18
NEIL3-202ENST00000513321 TRBV12-3P01733 135 aa16.2■□□□□ 0.18
NEIL3-202ENST00000513321 NKX2-1P43699 371 aaPredicted RBP16.2■□□□□ 0.18
NEIL3-202ENST00000513321 PVRIGQ6DKI7 326 aa16.2■□□□□ 0.18
NEIL3-202ENST00000513321 TRBV7-1A0A0A6YYK4 115 aa16.19■□□□□ 0.18
NEIL3-202ENST00000513321 K7EIM0 57 aa16.19■□□□□ 0.18
NEIL3-202ENST00000513321 IAPPP10997 89 aa16.19■□□□□ 0.18
NEIL3-202ENST00000513321 LINC00482Q8N8I6 264 aa16.19■□□□□ 0.18
NEIL3-202ENST00000513321 SLC24A4Q8NFF2 622 aa16.19■□□□□ 0.18
NEIL3-202ENST00000513321 SCARB1Q8WTV0 552 aa16.19■□□□□ 0.18
NEIL3-202ENST00000513321 PINX1Q96BK5 328 aaKnown RBP16.19■□□□□ 0.18
NEIL3-202ENST00000513321 CCDC140Q96MF4 163 aa16.19■□□□□ 0.18
NEIL3-202ENST00000513321 U3KQ87 197 aa16.19■□□□□ 0.18
NEIL3-202ENST00000513321 C7orf66A4D0T2 115 aa16.19■□□□□ 0.18
NEIL3-202ENST00000513321 I3L2K1 104 aa16.19■□□□□ 0.18
NEIL3-202ENST00000513321 SSNA1O43805 119 aa16.19■□□□□ 0.18
NEIL3-202ENST00000513321 IFNA10P01566 189 aa16.19■□□□□ 0.18
NEIL3-202ENST00000513321 OR8U8P0C7N1 319 aa16.19■□□□□ 0.18
NEIL3-202ENST00000513321 POLR2GP62487 172 aaKnown RBP eCLIP16.19■□□□□ 0.18
NEIL3-202ENST00000513321 C2orf83Q53S99 150 aa16.19■□□□□ 0.18
NEIL3-202ENST00000513321 FAM209BQ5JX69 171 aa16.19■□□□□ 0.18
NEIL3-202ENST00000513321 CLEC19AQ6UXS0 136 aa16.19■□□□□ 0.18
NEIL3-202ENST00000513321 GSG1LQ6UXU4 331 aa16.19■□□□□ 0.18
NEIL3-202ENST00000513321 ZNF502Q8TBZ5 544 aa16.19■□□□□ 0.18
NEIL3-202ENST00000513321 C2orf50Q96LR7 162 aa16.19■□□□□ 0.18
NEIL3-202ENST00000513321 PKD1L1Q8TDX9 2849 aa16.18■□□□□ 0.18
NEIL3-202ENST00000513321 WRBO00258 174 aa16.18■□□□□ 0.18
NEIL3-202ENST00000513321 SCGB1D2O95969 90 aa16.18■□□□□ 0.18
NEIL3-202ENST00000513321 MT-CO2P00403 227 aa16.18■□□□□ 0.18
NEIL3-202ENST00000513321 NPY1RP25929 384 aa16.18■□□□□ 0.18
NEIL3-202ENST00000513321 OXA1LQ15070 435 aa16.18■□□□□ 0.18
NEIL3-202ENST00000513321 WFDC9Q8NEX5 89 aa16.18■□□□□ 0.18
NEIL3-202ENST00000513321 TMEM170AQ8WVE7 144 aa16.18■□□□□ 0.18
NEIL3-202ENST00000513321 CIB3Q96Q77 187 aaPredicted RBP16.18■□□□□ 0.18
NEIL3-202ENST00000513321 ALG5Q9Y673 324 aa16.18■□□□□ 0.18
NEIL3-202ENST00000513321 CORTO00230 105 aa16.17■□□□□ 0.18
NEIL3-202ENST00000513321 GOSR2O14653 212 aa16.17■□□□□ 0.18
NEIL3-202ENST00000513321 CLEC3BP05452 202 aa16.17■□□□□ 0.18
NEIL3-202ENST00000513321 CD33P20138 364 aa16.17■□□□□ 0.18
NEIL3-202ENST00000513321 SLURP1P55000 103 aa16.17■□□□□ 0.18
NEIL3-202ENST00000513321 NOXA1Q86UR1 476 aa16.17■□□□□ 0.18
NEIL3-202ENST00000513321 C21orf62Q9NYP8 219 aa16.17■□□□□ 0.18
NEIL3-202ENST00000513321 PPP5D1E7EU14 171 aa16.16■□□□□ 0.18
NEIL3-202ENST00000513321 BMPR1BO00238 502 aa16.16■□□□□ 0.18
NEIL3-202ENST00000513321 SIX6O95475 246 aa16.16■□□□□ 0.18
NEIL3-202ENST00000513321 IGHV3-48P01763 117 aa16.16■□□□□ 0.18
NEIL3-202ENST00000513321 MBPP02686 304 aaPredicted RBP16.16■□□□□ 0.18
NEIL3-202ENST00000513321 ZP3P21754 424 aa16.16■□□□□ 0.18
NEIL3-202ENST00000513321 HOXD3P31249 432 aaPredicted RBP16.16■□□□□ 0.18
NEIL3-202ENST00000513321 ATP5IP56385 69 aaPredicted RBP16.15■□□□□ 0.18
NEIL3-202ENST00000513321 MLANAQ16655 118 aa16.15■□□□□ 0.18
NEIL3-202ENST00000513321 DCUN1D4Q92564 292 aa16.15■□□□□ 0.18
NEIL3-202ENST00000513321 DLX4Q92988 240 aaPredicted RBP16.15■□□□□ 0.18
NEIL3-202ENST00000513321 SSSCA1O60232 199 aa16.14■□□□□ 0.18
NEIL3-202ENST00000513321 LY86O95711 162 aa16.14■□□□□ 0.18
NEIL3-202ENST00000513321 GPR183P32249 361 aa16.14■□□□□ 0.18
NEIL3-202ENST00000513321 ARL3P36405 182 aa16.14■□□□□ 0.18
NEIL3-202ENST00000513321 OPRK1P41145 380 aa16.14■□□□□ 0.18
NEIL3-202ENST00000513321 MFAP4P55083 255 aa16.14■□□□□ 0.18
NEIL3-202ENST00000513321 UBAC2Q8NBM4 344 aa16.14■□□□□ 0.18
NEIL3-202ENST00000513321 RNASEH2CQ8TDP1 164 aaKnown RBP16.14■□□□□ 0.18
NEIL3-202ENST00000513321 FNDC4Q9H6D8 234 aaPredicted RBP16.14■□□□□ 0.18
NEIL3-202ENST00000513321 GGCTO75223 188 aaKnown RBP16.14■□□□□ 0.17
NEIL3-202ENST00000513321 IL15RAQ13261 267 aa16.14■□□□□ 0.17
NEIL3-202ENST00000513321 RPEL1Q2QD12 228 aa16.14■□□□□ 0.17
NEIL3-202ENST00000513321 Q56UQ5 140 aa16.14■□□□□ 0.17
NEIL3-202ENST00000513321 ZC4H2Q9NQZ6 224 aa16.14■□□□□ 0.17
NEIL3-202ENST00000513321 OR2T8A6NH00 312 aa16.13■□□□□ 0.17
NEIL3-202ENST00000513321 C15orf62A8K5M9 175 aa16.13■□□□□ 0.17
NEIL3-202ENST00000513321 F8W735 103 aaPredicted RBP16.13■□□□□ 0.17
NEIL3-202ENST00000513321 OR2C1O95371 312 aa16.13■□□□□ 0.17
NEIL3-202ENST00000513321 IFNA4P05014 189 aa16.13■□□□□ 0.17
NEIL3-202ENST00000513321 RPP30P78346 268 aaKnown RBP16.13■□□□□ 0.17
NEIL3-202ENST00000513321 KLF5Q13887 457 aaPredicted RBP16.13■□□□□ 0.17
NEIL3-202ENST00000513321 SPANXN5Q5MJ07 72 aa16.13■□□□□ 0.17
NEIL3-202ENST00000513321 ACSM6Q6P461 480 aa16.13■□□□□ 0.17
NEIL3-202ENST00000513321 SMIM8Q96KF7 97 aa16.13■□□□□ 0.17
NEIL3-202ENST00000513321 ATP6V0BQ99437 205 aa16.13■□□□□ 0.17
NEIL3-202ENST00000513321 TXN2Q99757 166 aa16.13■□□□□ 0.17
NEIL3-202ENST00000513321 PSENENQ9NZ42 101 aa16.13■□□□□ 0.17
NEIL3-202ENST00000513321 PAIP2BQ9ULR5 123 aaKnown RBP16.13■□□□□ 0.17
NEIL3-202ENST00000513321 RCL1Q9Y2P8 373 aaKnown RBP16.13■□□□□ 0.17
NEIL3-202ENST00000513321 TMEM50AO95807 157 aa16.12■□□□□ 0.17
NEIL3-202ENST00000513321 PAX9P55771 341 aa16.12■□□□□ 0.17
NEIL3-202ENST00000513321 RAB11AP62491 216 aa16.12■□□□□ 0.17
NEIL3-202ENST00000513321 OR4C12Q96R67 309 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms