RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 CITED2Q99967 270 aaPredicted RBP5.9□□□□□ -1.46
HMGXB3-204ENST00000513318 NMES1Q9C002 83 aa5.9□□□□□ -1.46
HMGXB3-204ENST00000513318 MED28Q9H204 178 aa5.9□□□□□ -1.46
HMGXB3-204ENST00000513318 KLK15Q9H2R5 256 aa5.9□□□□□ -1.46
HMGXB3-204ENST00000513318 RBKSQ9H477 322 aa5.9□□□□□ -1.46
HMGXB3-204ENST00000513318 GSKIPQ9P0R6 139 aa5.9□□□□□ -1.46
HMGXB3-204ENST00000513318 MGAT4CQ9UBM8 478 aa5.9□□□□□ -1.46
HMGXB3-204ENST00000513318 NUDT19A8MXV4 375 aa5.89□□□□□ -1.47
HMGXB3-204ENST00000513318 CORTO00230 105 aa5.89□□□□□ -1.47
HMGXB3-204ENST00000513318 OR2J3O76001 311 aa5.89□□□□□ -1.47
HMGXB3-204ENST00000513318 PRH1P02810 166 aa5.89□□□□□ -1.47
HMGXB3-204ENST00000513318 RNASE2P10153 161 aaKnown RBP5.89□□□□□ -1.47
HMGXB3-204ENST00000513318 IAPPP10997 89 aa5.89□□□□□ -1.47
HMGXB3-204ENST00000513318 NPY1RP25929 384 aa5.89□□□□□ -1.47
HMGXB3-204ENST00000513318 HTR2BP41595 481 aa5.89□□□□□ -1.47
HMGXB3-204ENST00000513318 ATP5IP56385 69 aaPredicted RBP5.89□□□□□ -1.47
HMGXB3-204ENST00000513318 RRAS2P62070 204 aaPredicted RBP5.89□□□□□ -1.47
HMGXB3-204ENST00000513318 POLR2GP62487 172 aaKnown RBP eCLIP5.89□□□□□ -1.47
HMGXB3-204ENST00000513318 RHOGP84095 191 aa5.89□□□□□ -1.47
HMGXB3-204ENST00000513318 DEFA5Q01523 94 aa5.89□□□□□ -1.47
HMGXB3-204ENST00000513318 KIAA0141Q14154 515 aaPredicted RBP5.89□□□□□ -1.47
HMGXB3-204ENST00000513318 C15orf32Q32M92 178 aa5.89□□□□□ -1.47
HMGXB3-204ENST00000513318 BSXQ3C1V8 233 aa5.89□□□□□ -1.47
HMGXB3-204ENST00000513318 C2orf83Q53S99 150 aa5.89□□□□□ -1.47
HMGXB3-204ENST00000513318 FAM209BQ5JX69 171 aa5.89□□□□□ -1.47
HMGXB3-204ENST00000513318 SLC25A24Q6NUK1 477 aa5.89□□□□□ -1.47
HMGXB3-204ENST00000513318 C19orf35Q6ZS72 473 aa5.89□□□□□ -1.47
HMGXB3-204ENST00000513318 NOXA1Q86UR1 476 aa5.89□□□□□ -1.47
HMGXB3-204ENST00000513318 KLHL30-AS1Q8NEE0 82 aa5.89□□□□□ -1.47
HMGXB3-204ENST00000513318 C4orf3Q8WVX3 66 aa5.89□□□□□ -1.47
HMGXB3-204ENST00000513318 CXorf58Q96LI9 332 aa5.89□□□□□ -1.47
HMGXB3-204ENST00000513318 RAB40CQ96S21 281 aa5.89□□□□□ -1.47
HMGXB3-204ENST00000513318 RCL1Q9Y2P8 373 aaKnown RBP5.89□□□□□ -1.47
HMGXB3-204ENST00000513318 U3KQ87 197 aa5.89□□□□□ -1.47
HMGXB3-204ENST00000513318 K7EPK0 472 aa5.88□□□□□ -1.47
HMGXB3-204ENST00000513318 SSSCA1O60232 199 aa5.88□□□□□ -1.47
HMGXB3-204ENST00000513318 SIX6O95475 246 aa5.88□□□□□ -1.47
HMGXB3-204ENST00000513318 IFNA10P01566 189 aa5.88□□□□□ -1.47
HMGXB3-204ENST00000513318 MBPP02686 304 aaPredicted RBP5.88□□□□□ -1.47
HMGXB3-204ENST00000513318 LGALS1P09382 135 aaKnown RBP5.88□□□□□ -1.47
HMGXB3-204ENST00000513318 PET100P0DJ07 73 aa5.88□□□□□ -1.47
HMGXB3-204ENST00000513318 PVALBP20472 110 aaPredicted RBP5.88□□□□□ -1.47
HMGXB3-204ENST00000513318 MFAP2P55001 183 aa5.88□□□□□ -1.47
HMGXB3-204ENST00000513318 H2BFSP57053 126 aa5.88□□□□□ -1.47
HMGXB3-204ENST00000513318 TAS2R30P59541 319 aa5.88□□□□□ -1.47
HMGXB3-204ENST00000513318 RPP30P78346 268 aaKnown RBP5.88□□□□□ -1.47
HMGXB3-204ENST00000513318 RUNX1Q01196 453 aa5.88□□□□□ -1.47
HMGXB3-204ENST00000513318 ATP5G2Q06055 141 aa5.88□□□□□ -1.47
HMGXB3-204ENST00000513318 IL15RAQ13261 267 aa5.88□□□□□ -1.47
HMGXB3-204ENST00000513318 RAB32Q13637 225 aa5.88□□□□□ -1.47
HMGXB3-204ENST00000513318 EXOSC2Q13868 293 aaKnown RBP5.88□□□□□ -1.47
HMGXB3-204ENST00000513318 PVRIGQ6DKI7 326 aa5.88□□□□□ -1.47
HMGXB3-204ENST00000513318 VN1R17PQ8TDU5 208 aa5.88□□□□□ -1.47
HMGXB3-204ENST00000513318 ASB13Q8WXK3 278 aa5.88□□□□□ -1.47
HMGXB3-204ENST00000513318 MAGT1Q9H0U3 335 aa5.88□□□□□ -1.47
HMGXB3-204ENST00000513318 GNB4Q9HAV0 340 aa5.88□□□□□ -1.47
HMGXB3-204ENST00000513318 FBXL7Q9UJT9 491 aa5.88□□□□□ -1.47
HMGXB3-204ENST00000513318 LSM5Q9Y4Y9 91 aaKnown RBP5.88□□□□□ -1.47
HMGXB3-204ENST00000513318 DMRT1Q9Y5R6 373 aa5.88□□□□□ -1.47
HMGXB3-204ENST00000513318 TRBV7-1A0A0A6YYK4 115 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 RPS10-NUDT3A0A1W2PQS6 291 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 A0A1W2PRX2 142 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 MFSD2BA6NFX1 497 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 C15orf62A8K5M9 175 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 I3L521 148 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 K7EIM0 57 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 L7N2F9 121 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 M0QZ24 198 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 TSC22D2O75157 780 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 NDUFB8O95169 186 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 IGHV3-11P01762 117 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 CXCL3P19876 107 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 OPRK1P41145 380 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 S100A10P60903 97 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 RAB11AP62491 216 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 VAMP2P63027 116 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 FCN2Q15485 313 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 NSUN5P1Q3KNT7 163 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 HIST2H2BDQ6DRA6 164 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 C11orf87Q6NUJ2 197 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 ZNF343Q6P1L6 599 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 Q6ZNX1 250 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 OR4F17Q8NGA8 305 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 OR11H7Q8NGC8 314 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 RNASEH2CQ8TDP1 164 aaKnown RBP5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 PPP1R1CQ8WVI7 109 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 EEF1AKMT3Q96AZ1 226 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 PINX1Q96BK5 328 aaKnown RBP5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 MISP3Q96FF7 219 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 SMIM8Q96KF7 97 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 OR4F4Q96R69 305 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 ATP6V0BQ99437 205 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 PSENENQ9NZ42 101 aa5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 STRAPQ9Y3F4 350 aaKnown RBP5.87□□□□□ -1.47
HMGXB3-204ENST00000513318 H3BP45 60 aa5.86□□□□□ -1.47
HMGXB3-204ENST00000513318 I3L2K1 104 aa5.86□□□□□ -1.47
HMGXB3-204ENST00000513318 DEDDO75618 318 aa5.86□□□□□ -1.47
HMGXB3-204ENST00000513318 SCAF4O95104 1147 aaKnown RBP5.86□□□□□ -1.47
HMGXB3-204ENST00000513318 MT-CO2P00403 227 aa5.86□□□□□ -1.47
HMGXB3-204ENST00000513318 RLN2P04090 185 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms