RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 PAX2Q02962 417 aa10.53□□□□□ -0.72
DEPDC1B-206ENST00000512452 BTN1A1Q13410 526 aa10.53□□□□□ -0.72
DEPDC1B-206ENST00000512452 ARSJQ5FYB0 599 aaPredicted RBP10.53□□□□□ -0.72
DEPDC1B-206ENST00000512452 PVRIGQ6DKI7 326 aa10.53□□□□□ -0.72
DEPDC1B-206ENST00000512452 HCP5Q6MZN7 132 aa10.53□□□□□ -0.72
DEPDC1B-206ENST00000512452 ATRAIDQ6UW56 229 aa10.53□□□□□ -0.72
DEPDC1B-206ENST00000512452 ZNF114Q8NC26 417 aa10.53□□□□□ -0.72
DEPDC1B-206ENST00000512452 MGST2Q99735 147 aa10.53□□□□□ -0.72
DEPDC1B-206ENST00000512452 MANBALQ9NQG1 85 aa10.53□□□□□ -0.72
DEPDC1B-206ENST00000512452 SIGLEC9Q9Y336 463 aa10.53□□□□□ -0.72
DEPDC1B-206ENST00000512452 ACTL6BO94805 426 aa10.52□□□□□ -0.73
DEPDC1B-206ENST00000512452 IGKV1D-33P01593 117 aa10.52□□□□□ -0.73
DEPDC1B-206ENST00000512452 IGKV1-33P01594 117 aa10.52□□□□□ -0.73
DEPDC1B-206ENST00000512452 MYOD1P15172 320 aa10.52□□□□□ -0.73
DEPDC1B-206ENST00000512452 RPL27AP46776 148 aaKnown RBP10.52□□□□□ -0.73
DEPDC1B-206ENST00000512452 CDC34P49427 236 aaPredicted RBP10.52□□□□□ -0.73
DEPDC1B-206ENST00000512452 LMO4P61968 165 aa10.52□□□□□ -0.73
DEPDC1B-206ENST00000512452 CD69Q07108 199 aa10.52□□□□□ -0.73
DEPDC1B-206ENST00000512452 MRGPRG-AS1Q2M3A8 158 aa10.52□□□□□ -0.73
DEPDC1B-206ENST00000512452 SOHLH1Q5JUK2 328 aa10.52□□□□□ -0.73
DEPDC1B-206ENST00000512452 LCN15Q6UWW0 184 aa10.52□□□□□ -0.73
DEPDC1B-206ENST00000512452 CLRN3Q8NCR9 226 aa10.52□□□□□ -0.73
DEPDC1B-206ENST00000512452 RARRES2Q99969 163 aa10.52□□□□□ -0.73
DEPDC1B-206ENST00000512452 SIRPDQ9H106 197 aa10.52□□□□□ -0.73
DEPDC1B-206ENST00000512452 VAX2Q9UIW0 290 aa10.52□□□□□ -0.73
DEPDC1B-206ENST00000512452 TBL2Q9Y4P3 447 aaKnown RBP10.52□□□□□ -0.73
DEPDC1B-206ENST00000512452 PXMP4Q9Y6I8 212 aa10.52□□□□□ -0.73
DEPDC1B-206ENST00000512452 A0A1B0GV50 99 aa10.51□□□□□ -0.73
DEPDC1B-206ENST00000512452 DNASE2O00115 360 aaPredicted RBP10.51□□□□□ -0.73
DEPDC1B-206ENST00000512452 NDUFS7O75251 213 aa10.51□□□□□ -0.73
DEPDC1B-206ENST00000512452 IGHV4-39P01824 125 aa10.51□□□□□ -0.73
DEPDC1B-206ENST00000512452 PSMB3P49720 205 aa10.51□□□□□ -0.73
DEPDC1B-206ENST00000512452 HAGHQ16775 308 aa10.51□□□□□ -0.73
DEPDC1B-206ENST00000512452 ETFRF1Q6IPR1 90 aa10.51□□□□□ -0.73
DEPDC1B-206ENST00000512452 FAM122CQ6P4D5 195 aa10.51□□□□□ -0.73
DEPDC1B-206ENST00000512452 PPP1R27Q86WC6 154 aa10.51□□□□□ -0.73
DEPDC1B-206ENST00000512452 NPBQ8NG41 125 aa10.51□□□□□ -0.73
DEPDC1B-206ENST00000512452 RAB24Q969Q5 203 aa10.51□□□□□ -0.73
DEPDC1B-206ENST00000512452 SLC35E1Q96K37 410 aa10.51□□□□□ -0.73
DEPDC1B-206ENST00000512452 CCL19Q99731 98 aa10.51□□□□□ -0.73
DEPDC1B-206ENST00000512452 GNG13Q9P2W3 67 aa10.51□□□□□ -0.73
DEPDC1B-206ENST00000512452 IGHV3-72A0A0B4J1Y9 119 aa10.5□□□□□ -0.73
DEPDC1B-206ENST00000512452 A0A1W2PPV4 95 aa10.5□□□□□ -0.73
DEPDC1B-206ENST00000512452 CGB1A6NKQ9 187 aa10.5□□□□□ -0.73
DEPDC1B-206ENST00000512452 CORTO00230 105 aa10.5□□□□□ -0.73
DEPDC1B-206ENST00000512452 TIMM23O14925 209 aa10.5□□□□□ -0.73
DEPDC1B-206ENST00000512452 VENTXO95231 258 aa10.5□□□□□ -0.73
DEPDC1B-206ENST00000512452 ZFP36P26651 326 aaKnown RBP10.5□□□□□ -0.73
DEPDC1B-206ENST00000512452 PRR20EP86478 221 aa10.5□□□□□ -0.73
DEPDC1B-206ENST00000512452 PRR20CP86479 221 aa10.5□□□□□ -0.73
DEPDC1B-206ENST00000512452 PRR20DP86480 221 aa10.5□□□□□ -0.73
DEPDC1B-206ENST00000512452 PRR20BP86481 221 aa10.5□□□□□ -0.73
DEPDC1B-206ENST00000512452 PRR20AP86496 221 aa10.5□□□□□ -0.73
DEPDC1B-206ENST00000512452 WT1-ASQ06250 92 aa10.5□□□□□ -0.73
DEPDC1B-206ENST00000512452 RHEBQ15382 184 aa10.5□□□□□ -0.73
DEPDC1B-206ENST00000512452 Q5PR19 223 aa10.5□□□□□ -0.73
DEPDC1B-206ENST00000512452 SSX7Q7RTT5 188 aa10.5□□□□□ -0.73
DEPDC1B-206ENST00000512452 VMO1Q7Z5L0 202 aa10.5□□□□□ -0.73
DEPDC1B-206ENST00000512452 CFHR4Q92496 578 aa10.5□□□□□ -0.73
DEPDC1B-206ENST00000512452 C1orf159Q96HA4 380 aa10.5□□□□□ -0.73
DEPDC1B-206ENST00000512452 Q96MF0 132 aa10.5□□□□□ -0.73
DEPDC1B-206ENST00000512452 TXNDC17Q9BRA2 123 aa10.5□□□□□ -0.73
DEPDC1B-206ENST00000512452 PIMREGQ9BSJ6 248 aa10.5□□□□□ -0.73
DEPDC1B-206ENST00000512452 BPESC1Q9GZL8 116 aa10.5□□□□□ -0.73
DEPDC1B-206ENST00000512452 SLC25A22Q9H936 323 aa10.5□□□□□ -0.73
DEPDC1B-206ENST00000512452 SIRT7Q9NRC8 400 aa10.5□□□□□ -0.73
DEPDC1B-206ENST00000512452 BEX4Q9NWD9 120 aaPredicted RBP10.5□□□□□ -0.73
DEPDC1B-206ENST00000512452 METTL1Q9UBP6 276 aaKnown RBP10.5□□□□□ -0.73
DEPDC1B-206ENST00000512452 IGLC7A0M8Q6 106 aa10.49□□□□□ -0.73
DEPDC1B-206ENST00000512452 YIF1AO95070 293 aa10.49□□□□□ -0.73
DEPDC1B-206ENST00000512452 NDUFA3O95167 84 aa10.49□□□□□ -0.73
DEPDC1B-206ENST00000512452 MOSP00540 346 aa10.49□□□□□ -0.73
DEPDC1B-206ENST00000512452 OPN1MWP04001 364 aa10.49□□□□□ -0.73
DEPDC1B-206ENST00000512452 OPN1MW2P0DN77 364 aa10.49□□□□□ -0.73
DEPDC1B-206ENST00000512452 OPN1MW3P0DN78 364 aa10.49□□□□□ -0.73
DEPDC1B-206ENST00000512452 PAX1P15863 534 aa10.49□□□□□ -0.73
DEPDC1B-206ENST00000512452 PAX6P26367 422 aa10.49□□□□□ -0.73
DEPDC1B-206ENST00000512452 NPBWR1P48145 328 aa10.49□□□□□ -0.73
DEPDC1B-206ENST00000512452 UBE2E1P51965 193 aa10.49□□□□□ -0.73
DEPDC1B-206ENST00000512452 LGALS4P56470 323 aa10.49□□□□□ -0.73
DEPDC1B-206ENST00000512452 B2MP61769 119 aa10.49□□□□□ -0.73
DEPDC1B-206ENST00000512452 SLC16A13Q7RTY0 426 aa10.49□□□□□ -0.73
DEPDC1B-206ENST00000512452 SLC35E3Q7Z769 313 aa10.49□□□□□ -0.73
DEPDC1B-206ENST00000512452 OR10W1Q8NGF6 305 aa10.49□□□□□ -0.73
DEPDC1B-206ENST00000512452 NANPQ8TBE9 248 aa10.49□□□□□ -0.73
DEPDC1B-206ENST00000512452 RXFP4Q8TDU9 374 aa10.49□□□□□ -0.73
DEPDC1B-206ENST00000512452 RITA1Q96K30 269 aa10.49□□□□□ -0.73
DEPDC1B-206ENST00000512452 LPAR2Q9HBW0 351 aa10.49□□□□□ -0.73
DEPDC1B-206ENST00000512452 SLC45A2Q9UMX9 530 aa10.49□□□□□ -0.73
DEPDC1B-206ENST00000512452 NBEAL2Q6ZNJ1 2754 aa10.48□□□□□ -0.73
DEPDC1B-206ENST00000512452 TMEM250H0YL14 139 aa10.48□□□□□ -0.73
DEPDC1B-206ENST00000512452 NBR2O15453 112 aa10.48□□□□□ -0.73
DEPDC1B-206ENST00000512452 MT-CO2P00403 227 aa10.48□□□□□ -0.73
DEPDC1B-206ENST00000512452 SNRNP70P08621 437 aaKnown RBP10.48□□□□□ -0.73
DEPDC1B-206ENST00000512452 OR13C7P0DN81 318 aa10.48□□□□□ -0.73
DEPDC1B-206ENST00000512452 DLX1P56177 255 aa10.48□□□□□ -0.73
DEPDC1B-206ENST00000512452 DSCR9P59020 149 aa10.48□□□□□ -0.73
DEPDC1B-206ENST00000512452 RHOBP62745 196 aa10.48□□□□□ -0.73
DEPDC1B-206ENST00000512452 EBI3Q14213 229 aa10.48□□□□□ -0.73
DEPDC1B-206ENST00000512452 GAMTQ14353 236 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms