RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 C11orf87Q6NUJ2 197 aa10.61□□□□□ -0.71
DDX41-212ENST00000511040 UNQ9165/PRO28630Q6UXU0 137 aa10.61□□□□□ -0.71
DDX41-212ENST00000511040 LGI3Q8N145 548 aa10.61□□□□□ -0.71
DDX41-212ENST00000511040 ZNF114Q8NC26 417 aa10.61□□□□□ -0.71
DDX41-212ENST00000511040 DYNLRB2Q8TF09 96 aa10.61□□□□□ -0.71
DDX41-212ENST00000511040 DEDD2Q8WXF8 326 aa10.61□□□□□ -0.71
DDX41-212ENST00000511040 IL22RA2Q969J5 263 aa10.61□□□□□ -0.71
DDX41-212ENST00000511040 SLC25A21Q9BQT8 299 aaPredicted RBP10.61□□□□□ -0.71
DDX41-212ENST00000511040 CHRDL1Q9BU40 450 aa10.61□□□□□ -0.71
DDX41-212ENST00000511040 LSM4Q9Y4Z0 139 aaKnown RBP10.61□□□□□ -0.71
DDX41-212ENST00000511040 F8W735 103 aaPredicted RBP10.6□□□□□ -0.71
DDX41-212ENST00000511040 LGALS9O00182 355 aa10.6□□□□□ -0.71
DDX41-212ENST00000511040 SULT1A3P0DMM9 295 aa10.6□□□□□ -0.71
DDX41-212ENST00000511040 SULT1A4P0DMN0 295 aa10.6□□□□□ -0.71
DDX41-212ENST00000511040 RNASE2P10153 161 aaKnown RBP10.6□□□□□ -0.71
DDX41-212ENST00000511040 ANXA3P12429 323 aa10.6□□□□□ -0.71
DDX41-212ENST00000511040 SPCS3P61009 180 aa10.6□□□□□ -0.71
DDX41-212ENST00000511040 PPP1R1AQ13522 171 aa10.6□□□□□ -0.71
DDX41-212ENST00000511040 ANKRD55Q3KP44 614 aa10.6□□□□□ -0.71
DDX41-212ENST00000511040 TM4SF20Q53R12 229 aa10.6□□□□□ -0.71
DDX41-212ENST00000511040 CENPSQ8N2Z9 138 aa10.6□□□□□ -0.71
DDX41-212ENST00000511040 FLVCR2Q9UPI3 526 aa10.6□□□□□ -0.71
DDX41-212ENST00000511040 IGHV3OR16-8A0A075B7F1 116 aa10.59□□□□□ -0.71
DDX41-212ENST00000511040 A0A0B4J2A0 478 aa10.59□□□□□ -0.71
DDX41-212ENST00000511040 TMEM213A2RRL7 107 aa10.59□□□□□ -0.71
DDX41-212ENST00000511040 NAP1L6A6NFF2 107 aa10.59□□□□□ -0.71
DDX41-212ENST00000511040 CEBPZOSA8MTT3 80 aa10.59□□□□□ -0.71
DDX41-212ENST00000511040 ADMP35318 185 aa10.59□□□□□ -0.71
DDX41-212ENST00000511040 SRPXP78539 464 aa10.59□□□□□ -0.71
DDX41-212ENST00000511040 CD69Q07108 199 aa10.59□□□□□ -0.71
DDX41-212ENST00000511040 RBMS2Q15434 407 aaKnown RBP10.59□□□□□ -0.71
DDX41-212ENST00000511040 CD300EQ496F6 205 aaPredicted RBP10.59□□□□□ -0.71
DDX41-212ENST00000511040 AARDQ4LEZ3 155 aa10.59□□□□□ -0.71
DDX41-212ENST00000511040 TMEM128Q5BJH2 165 aa10.59□□□□□ -0.71
DDX41-212ENST00000511040 NMSQ5H8A3 153 aa10.59□□□□□ -0.71
DDX41-212ENST00000511040 BSCL2Q96G97 398 aaPredicted RBP10.59□□□□□ -0.71
DDX41-212ENST00000511040 SIGLEC8Q9NYZ4 499 aa10.59□□□□□ -0.71
DDX41-212ENST00000511040 SHPKQ9UHJ6 478 aa10.59□□□□□ -0.71
DDX41-212ENST00000511040 INS-IGF2F8WCM5 200 aa10.58□□□□□ -0.72
DDX41-212ENST00000511040 ZNF207O43670 478 aaKnown RBP10.58□□□□□ -0.72
DDX41-212ENST00000511040 NDUFB6O95139 128 aa10.58□□□□□ -0.72
DDX41-212ENST00000511040 SFT2D2O95562 160 aa10.58□□□□□ -0.72
DDX41-212ENST00000511040 CBLN1P23435 193 aa10.58□□□□□ -0.72
DDX41-212ENST00000511040 BTCP35070 178 aa10.58□□□□□ -0.72
DDX41-212ENST00000511040 MFAP4P55083 255 aa10.58□□□□□ -0.72
DDX41-212ENST00000511040 DCTN2Q13561 401 aaKnown RBP10.58□□□□□ -0.72
DDX41-212ENST00000511040 SMCO1Q147U7 214 aa10.58□□□□□ -0.72
DDX41-212ENST00000511040 DEFB114Q30KQ6 69 aa10.58□□□□□ -0.72
DDX41-212ENST00000511040 OR52E5Q8NH55 327 aa10.58□□□□□ -0.72
DDX41-212ENST00000511040 ASCL2Q99929 193 aa10.58□□□□□ -0.72
DDX41-212ENST00000511040 C20orf24Q9BUV8 137 aa10.58□□□□□ -0.72
DDX41-212ENST00000511040 ZNF436Q9C0F3 470 aaPredicted RBP10.58□□□□□ -0.72
DDX41-212ENST00000511040 HEYLQ9NQ87 328 aaPredicted RBP10.58□□□□□ -0.72
DDX41-212ENST00000511040 CENPXA8MT69 81 aa10.57□□□□□ -0.72
DDX41-212ENST00000511040 A8MWP6 167 aa10.57□□□□□ -0.72
DDX41-212ENST00000511040 PLA2G10O15496 165 aa10.57□□□□□ -0.72
DDX41-212ENST00000511040 CTSGP08311 255 aa10.57□□□□□ -0.72
DDX41-212ENST00000511040 SUB1P53999 127 aaKnown RBP eCLIP10.57□□□□□ -0.72
DDX41-212ENST00000511040 MLANAQ16655 118 aa10.57□□□□□ -0.72
DDX41-212ENST00000511040 LCN12Q6JVE5 192 aa10.57□□□□□ -0.72
DDX41-212ENST00000511040 SPSB3Q6PJ21 355 aa10.57□□□□□ -0.72
DDX41-212ENST00000511040 UXS1Q8NBZ7 420 aa10.57□□□□□ -0.72
DDX41-212ENST00000511040 B9D2Q9BPU9 175 aa10.57□□□□□ -0.72
DDX41-212ENST00000511040 MLXQ9UH92 298 aa10.57□□□□□ -0.72
DDX41-212ENST00000511040 SMAD5-AS1Q9Y6J3 95 aa10.57□□□□□ -0.72
DDX41-212ENST00000511040 NUPL2O15504 423 aaKnown RBP10.56□□□□□ -0.72
DDX41-212ENST00000511040 ANXA7P20073 488 aaKnown RBP10.56□□□□□ -0.72
DDX41-212ENST00000511040 GUCA2BQ16661 112 aa10.56□□□□□ -0.72
DDX41-212ENST00000511040 PVRIGQ6DKI7 326 aa10.56□□□□□ -0.72
DDX41-212ENST00000511040 Q8N1Y9 231 aa10.56□□□□□ -0.72
DDX41-212ENST00000511040 OR1S1Q8NH92 325 aa10.56□□□□□ -0.72
DDX41-212ENST00000511040 TMEM190Q8WZ59 177 aa10.56□□□□□ -0.72
DDX41-212ENST00000511040 ZNF414Q96IQ9 312 aa10.56□□□□□ -0.72
DDX41-212ENST00000511040 RBKSQ9H477 322 aa10.56□□□□□ -0.72
DDX41-212ENST00000511040 PALMDQ9NP74 551 aa10.56□□□□□ -0.72
DDX41-212ENST00000511040 MRPL36Q9P0J6 103 aaKnown RBP10.56□□□□□ -0.72
DDX41-212ENST00000511040 UFC1Q9Y3C8 167 aa10.56□□□□□ -0.72
DDX41-212ENST00000511040 A0A1B0GU03 582 aa10.55□□□□□ -0.72
DDX41-212ENST00000511040 C9orf170A2RU37 121 aa10.55□□□□□ -0.72
DDX41-212ENST00000511040 GNG7O60262 68 aa10.55□□□□□ -0.72
DDX41-212ENST00000511040 HOXB5P09067 269 aa10.55□□□□□ -0.72
DDX41-212ENST00000511040 OPRK1P41145 380 aa10.55□□□□□ -0.72
DDX41-212ENST00000511040 HTR2BP41595 481 aa10.55□□□□□ -0.72
DDX41-212ENST00000511040 TNFRSF9Q07011 255 aa10.55□□□□□ -0.72
DDX41-212ENST00000511040 BSXQ3C1V8 233 aa10.55□□□□□ -0.72
DDX41-212ENST00000511040 BTNL8Q6UX41 500 aa10.55□□□□□ -0.72
DDX41-212ENST00000511040 LRTM2Q8N967 370 aa10.55□□□□□ -0.72
DDX41-212ENST00000511040 DUSP18Q8NEJ0 188 aa10.55□□□□□ -0.72
DDX41-212ENST00000511040 SLC24A4Q8NFF2 622 aa10.55□□□□□ -0.72
DDX41-212ENST00000511040 WDR89Q96FK6 387 aaPredicted RBP10.55□□□□□ -0.72
DDX41-212ENST00000511040 ATP6V0BQ99437 205 aa10.55□□□□□ -0.72
DDX41-212ENST00000511040 TXN2Q99757 166 aa10.55□□□□□ -0.72
DDX41-212ENST00000511040 C7orf50Q9BRJ6 194 aaKnown RBP10.55□□□□□ -0.72
DDX41-212ENST00000511040 FNDC4Q9H6D8 234 aaPredicted RBP10.55□□□□□ -0.72
DDX41-212ENST00000511040 GAR1Q9NY12 217 aaKnown RBP10.55□□□□□ -0.72
DDX41-212ENST00000511040 TECRQ9NZ01 308 aaKnown RBP10.55□□□□□ -0.72
DDX41-212ENST00000511040 DUXBA0A1W2PPF3 345 aa10.54□□□□□ -0.72
DDX41-212ENST00000511040 ZNF785A8K8V0 405 aa10.54□□□□□ -0.72
DDX41-212ENST00000511040 CORTO00230 105 aa10.54□□□□□ -0.72
DDX41-212ENST00000511040 NDUFA4O00483 81 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms