RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 SMCR5Q8TEV8 140 aa2.28□□□□□ -2.04
MBD4-209ENST00000511009 MRPS24Q96EL2 167 aaKnown RBP2.28□□□□□ -2.04
MBD4-209ENST00000511009 TTTY13Q9BZ97 58 aa2.28□□□□□ -2.04
MBD4-209ENST00000511009 ULBP3Q9BZM4 244 aa2.28□□□□□ -2.04
MBD4-209ENST00000511009 PSORS1C2Q9UIG4 136 aa2.28□□□□□ -2.04
MBD4-209ENST00000511009 TJP1Q07157 1748 aa2.28□□□□□ -2.05
MBD4-209ENST00000511009 ZNF831Q5JPB2 1677 aa2.28□□□□□ -2.05
MBD4-209ENST00000511009 SLX4Q8IY92 1834 aa2.27□□□□□ -2.05
MBD4-209ENST00000511009 A8MUN3 132 aa2.27□□□□□ -2.05
MBD4-209ENST00000511009 C2orf74A8MZ97 194 aa2.27□□□□□ -2.05
MBD4-209ENST00000511009 C3orf84H3BNL1 204 aa2.27□□□□□ -2.05
MBD4-209ENST00000511009 CD24P25063 80 aa2.27□□□□□ -2.05
MBD4-209ENST00000511009 OR4D2P58180 307 aa2.27□□□□□ -2.05
MBD4-209ENST00000511009 RANP62826 216 aaKnown RBP2.27□□□□□ -2.05
MBD4-209ENST00000511009 CCL7P80098 99 aa2.27□□□□□ -2.05
MBD4-209ENST00000511009 FOXF1Q12946 379 aa2.27□□□□□ -2.05
MBD4-209ENST00000511009 GRK1Q15835 563 aa2.27□□□□□ -2.05
MBD4-209ENST00000511009 ACOT6Q3I5F7 207 aaPredicted RBP2.27□□□□□ -2.05
MBD4-209ENST00000511009 ALKAL1Q6UXT8 129 aa2.27□□□□□ -2.05
MBD4-209ENST00000511009 Q6ZS52 159 aa2.27□□□□□ -2.05
MBD4-209ENST00000511009 LHFPL1Q86WI0 220 aa2.27□□□□□ -2.05
MBD4-209ENST00000511009 C20orf196Q8IYI0 205 aa2.27□□□□□ -2.05
MBD4-209ENST00000511009 LRRC25Q8N386 305 aaPredicted RBP2.27□□□□□ -2.05
MBD4-209ENST00000511009 ZNF675Q8TD23 568 aa2.27□□□□□ -2.05
MBD4-209ENST00000511009 PAQR5Q9NXK6 330 aaPredicted RBP2.27□□□□□ -2.05
MBD4-209ENST00000511009 CCL26Q9Y258 94 aa2.27□□□□□ -2.05
MBD4-209ENST00000511009 KIAA1551Q9HCM1 1747 aa2.27□□□□□ -2.05
MBD4-209ENST00000511009 SCN7AQ01118 1682 aa2.27□□□□□ -2.05
MBD4-209ENST00000511009 DICER1Q9UPY3 1922 aaKnown RBP2.27□□□□□ -2.05
MBD4-209ENST00000511009 SBF1O95248 1867 aa2.26□□□□□ -2.05
MBD4-209ENST00000511009 RIC1Q4ADV7 1423 aa2.26□□□□□ -2.05
MBD4-209ENST00000511009 AFDNP55196 1824 aaKnown RBP2.26□□□□□ -2.05
MBD4-209ENST00000511009 SCN11AQ9UI33 1791 aa2.26□□□□□ -2.05
MBD4-209ENST00000511009 ATG2BQ96BY7 2078 aa2.26□□□□□ -2.05
MBD4-209ENST00000511009 KNCNA6PVL3 124 aa2.26□□□□□ -2.05
MBD4-209ENST00000511009 FNDC10F2Z333 226 aa2.26□□□□□ -2.05
MBD4-209ENST00000511009 I3L521 148 aa2.26□□□□□ -2.05
MBD4-209ENST00000511009 J3QRE1 110 aa2.26□□□□□ -2.05
MBD4-209ENST00000511009 BHLHE40O14503 412 aa2.26□□□□□ -2.05
MBD4-209ENST00000511009 IFNA6P05013 189 aa2.26□□□□□ -2.05
MBD4-209ENST00000511009 SRP19P09132 144 aaKnown RBP2.26□□□□□ -2.05
MBD4-209ENST00000511009 CTXN2P0C2S0 81 aa2.26□□□□□ -2.05
MBD4-209ENST00000511009 ZNF728P0DKX0 622 aa2.26□□□□□ -2.05
MBD4-209ENST00000511009 S100A7P31151 101 aa2.26□□□□□ -2.05
MBD4-209ENST00000511009 CSN1S1P47710 185 aa2.26□□□□□ -2.05
MBD4-209ENST00000511009 HINT1P49773 126 aaPredicted RBP2.26□□□□□ -2.05
MBD4-209ENST00000511009 BASP1P80723 227 aaKnown RBP2.26□□□□□ -2.05
MBD4-209ENST00000511009 MEF2BQ02080 365 aaPredicted RBP2.26□□□□□ -2.05
MBD4-209ENST00000511009 AGTRAPQ6RW13 159 aa2.26□□□□□ -2.05
MBD4-209ENST00000511009 ZNF767PQ75MW2 155 aa2.26□□□□□ -2.05
MBD4-209ENST00000511009 SSX8Q7RTT4 187 aa2.26□□□□□ -2.05
MBD4-209ENST00000511009 ACOT12Q8WYK0 555 aa2.26□□□□□ -2.05
MBD4-209ENST00000511009 PPP1R2P1Q96PQ5 205 aa2.26□□□□□ -2.05
MBD4-209ENST00000511009 PSTPIP2Q9H939 334 aa2.26□□□□□ -2.05
MBD4-209ENST00000511009 CMTM6Q9NX76 183 aa2.26□□□□□ -2.05
MBD4-209ENST00000511009 PKIGQ9Y2B9 76 aa2.26□□□□□ -2.05
MBD4-209ENST00000511009 FAM215AQ9Y5M1 114 aa2.26□□□□□ -2.05
MBD4-209ENST00000511009 FER1L6Q2WGJ9 1857 aa2.26□□□□□ -2.05
MBD4-209ENST00000511009 CCDC88AQ3V6T2 1871 aa2.26□□□□□ -2.05
MBD4-209ENST00000511009 DLEC1Q9Y238 1755 aa2.26□□□□□ -2.05
MBD4-209ENST00000511009 NRXN2Q9P2S2 1712 aa2.25□□□□□ -2.05
MBD4-209ENST00000511009 DSCAMO60469 2012 aa2.25□□□□□ -2.05
MBD4-209ENST00000511009 CASP8AP2Q9UKL3 1982 aa2.25□□□□□ -2.05
MBD4-209ENST00000511009 TRGV5A0A0B4J1U4 118 aa2.25□□□□□ -2.05
MBD4-209ENST00000511009 SMIM9A6NGZ8 99 aa2.25□□□□□ -2.05
MBD4-209ENST00000511009 CREBL2O60519 120 aaPredicted RBP2.25□□□□□ -2.05
MBD4-209ENST00000511009 BPGMP07738 259 aa2.25□□□□□ -2.05
MBD4-209ENST00000511009 CA5AP35218 305 aa2.25□□□□□ -2.05
MBD4-209ENST00000511009 CCR2P41597 374 aa2.25□□□□□ -2.05
MBD4-209ENST00000511009 EDDM3AQ14507 147 aa2.25□□□□□ -2.05
MBD4-209ENST00000511009 MIAQ16674 131 aa2.25□□□□□ -2.05
MBD4-209ENST00000511009 SLC35E3Q7Z769 313 aa2.25□□□□□ -2.05
MBD4-209ENST00000511009 XAGE1AQ9HD64 81 aa2.25□□□□□ -2.05
MBD4-209ENST00000511009 NDUFB11Q9NX14 153 aa2.25□□□□□ -2.05
MBD4-209ENST00000511009 ANKRD31Q8N7Z5 1873 aa2.24□□□□□ -2.05
MBD4-209ENST00000511009 RTL9Q8NET4 1388 aa2.24□□□□□ -2.05
MBD4-209ENST00000511009 MED23Q9ULK4 1368 aa2.24□□□□□ -2.05
MBD4-209ENST00000511009 PQLC2LA1A4F0 135 aa2.24□□□□□ -2.05
MBD4-209ENST00000511009 KLRC4O43908 158 aa2.24□□□□□ -2.05
MBD4-209ENST00000511009 ZNF189O75820 626 aaPredicted RBP2.24□□□□□ -2.05
MBD4-209ENST00000511009 HIST1H1TP22492 207 aaPredicted RBP2.24□□□□□ -2.05
MBD4-209ENST00000511009 GUK1Q16774 197 aa2.24□□□□□ -2.05
MBD4-209ENST00000511009 ZNF181Q2M3W8 571 aa2.24□□□□□ -2.05
MBD4-209ENST00000511009 PABPC1L2AQ5JQF8 200 aa2.24□□□□□ -2.05
MBD4-209ENST00000511009 ANKRD29Q8N6D5 301 aa2.24□□□□□ -2.05
MBD4-209ENST00000511009 ZNF283Q8N7M2 679 aa2.24□□□□□ -2.05
MBD4-209ENST00000511009 OR5J2Q8NH18 312 aa2.24□□□□□ -2.05
MBD4-209ENST00000511009 KLK6Q92876 244 aa2.24□□□□□ -2.05
MBD4-209ENST00000511009 CMSS1Q9BQ75 279 aaKnown RBP2.24□□□□□ -2.05
MBD4-209ENST00000511009 ZNF471Q9BX82 626 aaPredicted RBP2.24□□□□□ -2.05
MBD4-209ENST00000511009 TRIM4Q9C037 500 aa2.24□□□□□ -2.05
MBD4-209ENST00000511009 COMMD5Q9GZQ3 224 aa2.24□□□□□ -2.05
MBD4-209ENST00000511009 PRTFDC1Q9NRG1 225 aa2.24□□□□□ -2.05
MBD4-209ENST00000511009 GLTPQ9NZD2 209 aa2.24□□□□□ -2.05
MBD4-209ENST00000511009 RSL24D1Q9UHA3 163 aaKnown RBP2.24□□□□□ -2.05
MBD4-209ENST00000511009 ZNF337Q9Y3M9 751 aa2.24□□□□□ -2.05
MBD4-209ENST00000511009 PAPPA2Q9BXP8 1791 aa2.23□□□□□ -2.05
MBD4-209ENST00000511009 TRPM7Q96QT4 1865 aa2.23□□□□□ -2.05
MBD4-209ENST00000511009 COL4A5P29400 1685 aa2.23□□□□□ -2.05
MBD4-209ENST00000511009 ADAMTS7Q9UKP4 1686 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms