RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 IGHV3-64DA0A0J9YX35 117 aa7.11□□□□□ -1.27
HTT-208ENST00000510626 UPK2O00526 184 aa7.11□□□□□ -1.27
HTT-208ENST00000510626 PCSK4Q6UW60 755 aa7.11□□□□□ -1.27
HTT-208ENST00000510626 NEGR1Q7Z3B1 354 aa7.11□□□□□ -1.27
HTT-208ENST00000510626 WNT10AQ9GZT5 417 aa7.11□□□□□ -1.27
HTT-208ENST00000510626 HIVEP3Q5T1R4 2406 aa7.11□□□□□ -1.27
HTT-208ENST00000510626 TRAV14DV4A0A0A6YYC5 116 aa7.11□□□□□ -1.27
HTT-208ENST00000510626 MEGF9Q9H1U4 602 aa7.11□□□□□ -1.27
HTT-208ENST00000510626 IL6RP08887 468 aaPredicted RBP7.11□□□□□ -1.27
HTT-208ENST00000510626 PRSS41Q7RTY9 318 aa7.11□□□□□ -1.27
HTT-208ENST00000510626 RNF126Q9BV68 326 aa7.11□□□□□ -1.27
HTT-208ENST00000510626 LGALS1P09382 135 aaKnown RBP7.11□□□□□ -1.27
HTT-208ENST00000510626 ZNF585BQ52M93 769 aa7.11□□□□□ -1.27
HTT-208ENST00000510626 A0A0G2JLM5 398 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 DMRTC1Q5HYR2 192 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 SMIM20Q8N5G0 67 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 RAX2Q96IS3 184 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 IGKV1D-16P01601 117 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 TIMP3P35625 211 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 GOLT1AQ6ZVE7 132 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 LINC00305Q7Z4B0 112 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 VEGFBP49765 207 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 ZNF525Q8N782 197 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 LINC00114Q6XXX2 140 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 ZNF441Q8N8Z8 693 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 SBF1O95248 1867 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 NPPCP23582 126 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 RPL23P62829 140 aaKnown RBP7.1□□□□□ -1.27
HTT-208ENST00000510626 DDB2Q92466 427 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 IFI27L2Q9H2X8 130 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 TRAV8-6A0A0B4J262 113 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 LY6G6FQ5SQ64 297 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 TEX38Q6PEX7 206 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 ATRAIDQ6UW56 229 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 ZNF479Q96JC4 524 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 GZMBP10144 247 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 SLC50A1Q9BRV3 221 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 LRRC37AA6NMS7 1700 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 PRR33A8MZF0 331 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 PAX2Q02962 417 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 FER1L6-AS1Q8NA97 138 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 AKIRIN1Q9H9L7 192 aaPredicted RBP7.1□□□□□ -1.27
HTT-208ENST00000510626 MDKP21741 143 aaPredicted RBP7.1□□□□□ -1.27
HTT-208ENST00000510626 COX7A1P24310 79 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 FZR1Q9UM11 496 aa7.1□□□□□ -1.27
HTT-208ENST00000510626 SHISA8B8ZZ34 492 aa7.09□□□□□ -1.27
HTT-208ENST00000510626 SLX1AQ9BQ83 275 aa7.09□□□□□ -1.27
HTT-208ENST00000510626 ID4P47928 161 aa7.09□□□□□ -1.27
HTT-208ENST00000510626 ECSCRQ19T08 205 aa7.09□□□□□ -1.27
HTT-208ENST00000510626 IGKV1-8A0A0C4DH67 115 aa7.09□□□□□ -1.27
HTT-208ENST00000510626 J3QRE1 110 aa7.09□□□□□ -1.27
HTT-208ENST00000510626 ZG16O60844 167 aa7.09□□□□□ -1.27
HTT-208ENST00000510626 FAM214BQ7L5A3 538 aa7.09□□□□□ -1.27
HTT-208ENST00000510626 FOXC2Q99958 501 aa7.09□□□□□ -1.27
HTT-208ENST00000510626 PPIAL4EA0A075B759 164 aa7.09□□□□□ -1.27
HTT-208ENST00000510626 PPIAL4DF5H284 164 aa7.09□□□□□ -1.27
HTT-208ENST00000510626 SMIM10L1P0DMW3 83 aa7.09□□□□□ -1.27
HTT-208ENST00000510626 PPIAL4FP0DN26 164 aa7.09□□□□□ -1.27
HTT-208ENST00000510626 SUMO2P61956 95 aaKnown RBP7.09□□□□□ -1.27
HTT-208ENST00000510626 EEF1AKMT3Q96AZ1 226 aa7.09□□□□□ -1.27
HTT-208ENST00000510626 SMIM10Q96HG1 83 aa7.09□□□□□ -1.27
HTT-208ENST00000510626 PPIAL4AQ9Y536 164 aa7.09□□□□□ -1.27
HTT-208ENST00000510626 GPX1P07203 203 aa7.09□□□□□ -1.27
HTT-208ENST00000510626 MEIG1Q5JSS6 88 aa7.09□□□□□ -1.27
HTT-208ENST00000510626 IGKCP01834 107 aa7.09□□□□□ -1.27
HTT-208ENST00000510626 NUP37Q8NFH4 326 aa7.09□□□□□ -1.27
HTT-208ENST00000510626 CT55Q8WUE5 264 aa7.09□□□□□ -1.27
HTT-208ENST00000510626 FAM89BQ8N5H3 189 aa7.09□□□□□ -1.27
HTT-208ENST00000510626 MESP1Q9BRJ9 268 aa7.09□□□□□ -1.27
HTT-208ENST00000510626 BRCA1P38398 1863 aaKnown RBP7.09□□□□□ -1.27
HTT-208ENST00000510626 ADAMTSL1Q8N6G6 1762 aa7.09□□□□□ -1.27
HTT-208ENST00000510626 CEACAM4O75871 244 aa7.09□□□□□ -1.27
HTT-208ENST00000510626 ALKBH6Q3KRA9 238 aa7.09□□□□□ -1.27
HTT-208ENST00000510626 ATP6V0BQ99437 205 aa7.09□□□□□ -1.27
HTT-208ENST00000510626 MRPS18CQ9Y3D5 142 aaKnown RBP7.09□□□□□ -1.27
HTT-208ENST00000510626 SRD5A1P18405 259 aa7.09□□□□□ -1.28
HTT-208ENST00000510626 TMEM170BQ5T4T1 132 aa7.09□□□□□ -1.28
HTT-208ENST00000510626 NPFFO15130 113 aa7.09□□□□□ -1.28
HTT-208ENST00000510626 IFITM1P13164 125 aa7.09□□□□□ -1.28
HTT-208ENST00000510626 FXYD3Q14802 87 aa7.09□□□□□ -1.28
HTT-208ENST00000510626 KLF17Q5JT82 389 aaPredicted RBP7.09□□□□□ -1.28
HTT-208ENST00000510626 FAM57AQ8TBR7 257 aa7.09□□□□□ -1.28
HTT-208ENST00000510626 PLEKHB2Q96CS7 222 aa7.09□□□□□ -1.28
HTT-208ENST00000510626 CCL3P10147 92 aa7.08□□□□□ -1.28
HTT-208ENST00000510626 IGHV4-34P06331 123 aa7.08□□□□□ -1.28
HTT-208ENST00000510626 IGHV1-24A0A0C4DH33 117 aa7.08□□□□□ -1.28
HTT-208ENST00000510626 LAGE3Q14657 143 aa7.08□□□□□ -1.28
HTT-208ENST00000510626 C3AR1Q16581 482 aa7.08□□□□□ -1.28
HTT-208ENST00000510626 KIR3DL3Q8N743 410 aa7.08□□□□□ -1.28
HTT-208ENST00000510626 PILRBQ9UKJ0 227 aa7.08□□□□□ -1.28
HTT-208ENST00000510626 VWA8A3KMH1 1905 aa7.08□□□□□ -1.28
HTT-208ENST00000510626 NKX2-8O15522 239 aa7.08□□□□□ -1.28
HTT-208ENST00000510626 TDGF1P3P51864 188 aa7.08□□□□□ -1.28
HTT-208ENST00000510626 CST9LQ9H4G1 147 aa7.08□□□□□ -1.28
HTT-208ENST00000510626 A0A0G2JMZ2 1700 aa7.08□□□□□ -1.28
HTT-208ENST00000510626 LRRC37A2A6NM11 1700 aa7.08□□□□□ -1.28
HTT-208ENST00000510626 UBR3Q6ZT12 1888 aa7.08□□□□□ -1.28
HTT-208ENST00000510626 GCSAMLQ5JQS6 135 aa7.08□□□□□ -1.28
HTT-208ENST00000510626 UCN2Q96RP3 112 aa7.08□□□□□ -1.28
HTT-208ENST00000510626 IGKV1D-42A0A075B6H8 117 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms