RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 CTDSPLO15194 276 aa17.17■□□□□ 0.34
SNF8-209ENST00000510558 NUPL2O15504 423 aaKnown RBP17.17■□□□□ 0.34
SNF8-209ENST00000510558 ST8SIA3O43173 380 aa17.17■□□□□ 0.34
SNF8-209ENST00000510558 UCP1P25874 307 aa17.17■□□□□ 0.34
SNF8-209ENST00000510558 FCGR2BP31994 310 aaPredicted RBP17.17■□□□□ 0.34
SNF8-209ENST00000510558 IL18Q14116 193 aa17.17■□□□□ 0.34
SNF8-209ENST00000510558 ZFAND6Q6FIF0 208 aa17.17■□□□□ 0.34
SNF8-209ENST00000510558 SLC35G3Q8N808 338 aa17.17■□□□□ 0.34
SNF8-209ENST00000510558 PINX1Q96BK5 328 aaKnown RBP17.17■□□□□ 0.34
SNF8-209ENST00000510558 ZNF414Q96IQ9 312 aa17.17■□□□□ 0.34
SNF8-209ENST00000510558 TXN2Q99757 166 aa17.17■□□□□ 0.34
SNF8-209ENST00000510558 FAM110AQ9BQ89 295 aa17.17■□□□□ 0.34
SNF8-209ENST00000510558 ZNF207O43670 478 aaKnown RBP17.16■□□□□ 0.34
SNF8-209ENST00000510558 IGHV3-48P01763 117 aa17.16■□□□□ 0.34
SNF8-209ENST00000510558 RELQ04864 619 aaPredicted RBP17.16■□□□□ 0.34
SNF8-209ENST00000510558 SPAG8Q99932 426 aaPredicted RBP17.16■□□□□ 0.34
SNF8-209ENST00000510558 RABL2AQ9UBK7 228 aaPredicted RBP17.16■□□□□ 0.34
SNF8-209ENST00000510558 RABL2BQ9UNT1 228 aa17.16■□□□□ 0.34
SNF8-209ENST00000510558 C14orf166Q9Y224 244 aaKnown RBP17.16■□□□□ 0.34
SNF8-209ENST00000510558 C15orf62A8K5M9 175 aa17.15■□□□□ 0.34
SNF8-209ENST00000510558 DISC1C4P0D8 188 aa17.15■□□□□ 0.34
SNF8-209ENST00000510558 TSPAN4O14817 238 aa17.15■□□□□ 0.34
SNF8-209ENST00000510558 B3GALNT1O75752 331 aa17.15■□□□□ 0.34
SNF8-209ENST00000510558 IFNA17P01571 189 aa17.15■□□□□ 0.34
SNF8-209ENST00000510558 AKAIN1P0CW23 69 aa17.15■□□□□ 0.34
SNF8-209ENST00000510558 OR4C16Q8NGL9 310 aa17.15■□□□□ 0.34
SNF8-209ENST00000510558 RRNAD1Q96FB5 475 aaKnown RBP17.15■□□□□ 0.34
SNF8-209ENST00000510558 PDCD10Q9BUL8 212 aa17.15■□□□□ 0.34
SNF8-209ENST00000510558 C6orf62Q9GZU0 229 aaPredicted RBP17.15■□□□□ 0.34
SNF8-209ENST00000510558 A0A0G2JRQ6 117 aa17.14■□□□□ 0.33
SNF8-209ENST00000510558 INS-IGF2F8WCM5 200 aa17.14■□□□□ 0.33
SNF8-209ENST00000510558 NOL3O60936 208 aaKnown RBP17.14■□□□□ 0.33
SNF8-209ENST00000510558 SNCAP37840 140 aa17.14■□□□□ 0.33
SNF8-209ENST00000510558 RPL5P46777 297 aaKnown RBP17.14■□□□□ 0.33
SNF8-209ENST00000510558 LAMTOR1Q6IAA8 161 aa17.14■□□□□ 0.33
SNF8-209ENST00000510558 RNASE11Q8TAA1 199 aaKnown RBP17.14■□□□□ 0.33
SNF8-209ENST00000510558 RTBDNQ9BSG5 229 aaPredicted RBP17.14■□□□□ 0.33
SNF8-209ENST00000510558 GGTLC1Q9BX51 225 aa17.14■□□□□ 0.33
SNF8-209ENST00000510558 NXF2Q9GZY0 626 aaKnown RBP17.14■□□□□ 0.33
SNF8-209ENST00000510558 GNG7O60262 68 aa17.13■□□□□ 0.33
SNF8-209ENST00000510558 OR5AC1P0C628 307 aa17.13■□□□□ 0.33
SNF8-209ENST00000510558 SURF2Q15527 256 aaPredicted RBP17.13■□□□□ 0.33
SNF8-209ENST00000510558 TMEM222Q9H0R3 208 aa17.13■□□□□ 0.33
SNF8-209ENST00000510558 NAA60Q9H7X0 242 aa17.13■□□□□ 0.33
SNF8-209ENST00000510558 SMPXQ9UHP9 88 aa17.13■□□□□ 0.33
SNF8-209ENST00000510558 LOC102724200A0A096LPH7 203 aaPredicted RBP17.12■□□□□ 0.33
SNF8-209ENST00000510558 TEX13DA0A0J9YY54 714 aaPredicted RBP17.12■□□□□ 0.33
SNF8-209ENST00000510558 H3BMQ9 156 aa17.12■□□□□ 0.33
SNF8-209ENST00000510558 YIF1AO95070 293 aa17.12■□□□□ 0.33
SNF8-209ENST00000510558 ETV6P41212 452 aa17.12■□□□□ 0.33
SNF8-209ENST00000510558 HOXA1P49639 335 aaPredicted RBP17.12■□□□□ 0.33
SNF8-209ENST00000510558 GLYATL2Q8WU03 294 aa17.12■□□□□ 0.33
SNF8-209ENST00000510558 SLIRPQ9GZT3 109 aaKnown RBP17.12■□□□□ 0.33
SNF8-209ENST00000510558 UBQLN2Q9UHD9 624 aa17.12■□□□□ 0.33
SNF8-209ENST00000510558 DYNC2H1Q8NCM8 4307 aaKnown RBP17.12■□□□□ 0.33
SNF8-209ENST00000510558 GSTZ1O43708 216 aaPredicted RBP17.11■□□□□ 0.33
SNF8-209ENST00000510558 CDS2O95674 445 aa17.11■□□□□ 0.33
SNF8-209ENST00000510558 RNASE2P10153 161 aaKnown RBP17.11■□□□□ 0.33
SNF8-209ENST00000510558 FAM219AQ8IW50 185 aa17.11■□□□□ 0.33
SNF8-209ENST00000510558 LHFPL5Q8TAF8 219 aa17.11■□□□□ 0.33
SNF8-209ENST00000510558 OR10C1Q96KK4 312 aa17.11■□□□□ 0.33
SNF8-209ENST00000510558 PRRT1Q99946 306 aa17.11■□□□□ 0.33
SNF8-209ENST00000510558 ENY2Q9NPA8 101 aa17.11■□□□□ 0.33
SNF8-209ENST00000510558 GPR132Q9UNW8 380 aa17.11■□□□□ 0.33
SNF8-209ENST00000510558 IGHV7-4-1A0A0J9YVY3 117 aa17.1■□□□□ 0.33
SNF8-209ENST00000510558 ANKRD20A5PA0PJZ0 165 aa17.1■□□□□ 0.33
SNF8-209ENST00000510558 NPBWR1P48145 328 aa17.1■□□□□ 0.33
SNF8-209ENST00000510558 SUB1P53999 127 aaKnown RBP eCLIP17.1■□□□□ 0.33
SNF8-209ENST00000510558 PVRIGQ6DKI7 326 aa17.1■□□□□ 0.33
SNF8-209ENST00000510558 Q6ZRM9 215 aa17.1■□□□□ 0.33
SNF8-209ENST00000510558 TMEM116Q8NCL8 245 aa17.1■□□□□ 0.33
SNF8-209ENST00000510558 DUSP18Q8NEJ0 188 aa17.1■□□□□ 0.33
SNF8-209ENST00000510558 OR51S1Q8NGJ8 323 aa17.1■□□□□ 0.33
SNF8-209ENST00000510558 RBPMSQ93062 196 aaKnown RBP17.1■□□□□ 0.33
SNF8-209ENST00000510558 RHPN1-AS1Q9BWJ2 59 aa17.1■□□□□ 0.33
SNF8-209ENST00000510558 RSL24D1Q9UHA3 163 aaKnown RBP17.1■□□□□ 0.33
SNF8-209ENST00000510558 IGHV3-49A0A0A0MS15 119 aa17.09■□□□□ 0.33
SNF8-209ENST00000510558 OR4C46A6NHA9 309 aa17.09■□□□□ 0.33
SNF8-209ENST00000510558 CRYM-AS1A6NIL9 109 aa17.09■□□□□ 0.33
SNF8-209ENST00000510558 CORTO00230 105 aa17.09■□□□□ 0.33
SNF8-209ENST00000510558 CHEK1O14757 476 aa17.09■□□□□ 0.33
SNF8-209ENST00000510558 DHODHQ02127 395 aa17.09■□□□□ 0.33
SNF8-209ENST00000510558 ODF3L2Q3SX64 289 aa17.09■□□□□ 0.33
SNF8-209ENST00000510558 SELENOHQ8IZQ5 122 aaKnown RBP17.09■□□□□ 0.33
SNF8-209ENST00000510558 RNF2Q99496 336 aa17.09■□□□□ 0.33
SNF8-209ENST00000510558 TNFSF8P32971 234 aa17.08■□□□□ 0.32
SNF8-209ENST00000510558 AARDQ4LEZ3 155 aa17.08■□□□□ 0.32
SNF8-209ENST00000510558 MCFD2Q8NI22 146 aa17.08■□□□□ 0.32
SNF8-209ENST00000510558 SOSTQ9BQB4 213 aa17.08■□□□□ 0.32
SNF8-209ENST00000510558 TRAV14DV4A0A0A6YYC5 116 aa17.07■□□□□ 0.32
SNF8-209ENST00000510558 SPCS3P61009 180 aa17.07■□□□□ 0.32
SNF8-209ENST00000510558 TMEM268Q5VZI3 342 aa17.07■□□□□ 0.32
SNF8-209ENST00000510558 TOMM20LQ6UXN7 152 aa17.07■□□□□ 0.32
SNF8-209ENST00000510558 GINS3Q9BRX5 216 aa17.07■□□□□ 0.32
SNF8-209ENST00000510558 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.07■□□□□ 0.32
SNF8-209ENST00000510558 CACNG5Q9UF02 275 aa17.07■□□□□ 0.32
SNF8-209ENST00000510558 CSMD3Q7Z407 3707 aa17.07■□□□□ 0.32
SNF8-209ENST00000510558 STARD9Q9P2P6 4700 aa17.06■□□□□ 0.32
SNF8-209ENST00000510558 TENM2Q9NT68 2774 aa17.06■□□□□ 0.32
SNF8-209ENST00000510558 FABP12A6NFH5 140 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms