RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 C5orf30Q96GV9 206 aa8.86□□□□□ -0.99
NEK1-206ENST00000510533 IGHV3OR16-8A0A075B7F1 116 aa8.86□□□□□ -0.99
NEK1-206ENST00000510533 HIST1H2BKO60814 126 aa8.86□□□□□ -0.99
NEK1-206ENST00000510533 HIST1H2BJP06899 126 aa8.86□□□□□ -0.99
NEK1-206ENST00000510533 HIST1H2BOP23527 126 aa8.86□□□□□ -0.99
NEK1-206ENST00000510533 HIST1H2BBP33778 126 aa8.86□□□□□ -0.99
NEK1-206ENST00000510533 HIST1H2BDP58876 126 aa8.86□□□□□ -0.99
NEK1-206ENST00000510533 HIST1H2BCP62807 126 aa8.86□□□□□ -0.99
NEK1-206ENST00000510533 HIST2H2BEQ16778 126 aa8.86□□□□□ -0.99
NEK1-206ENST00000510533 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.86□□□□□ -0.99
NEK1-206ENST00000510533 ZNF497Q6ZNH5 498 aa8.86□□□□□ -0.99
NEK1-206ENST00000510533 HIST1H2BHQ93079 126 aa8.86□□□□□ -0.99
NEK1-206ENST00000510533 DUX3Q96PT4 197 aa8.86□□□□□ -0.99
NEK1-206ENST00000510533 HIST1H2BNQ99877 126 aa8.86□□□□□ -0.99
NEK1-206ENST00000510533 HIST1H2BMQ99879 126 aa8.86□□□□□ -0.99
NEK1-206ENST00000510533 TYMSP04818 313 aa8.86□□□□□ -0.99
NEK1-206ENST00000510533 RNASE4P34096 147 aaKnown RBP8.86□□□□□ -0.99
NEK1-206ENST00000510533 MRPL14Q6P1L8 145 aaKnown RBP8.86□□□□□ -0.99
NEK1-206ENST00000510533 SSBP4Q9BWG4 385 aaPredicted RBP8.86□□□□□ -0.99
NEK1-206ENST00000510533 COL11A2P13942 1736 aaPredicted RBP8.86□□□□□ -0.99
NEK1-206ENST00000510533 CACNA1IQ9P0X4 2223 aa8.86□□□□□ -0.99
NEK1-206ENST00000510533 H3BUT2 72 aa8.86□□□□□ -0.99
NEK1-206ENST00000510533 TMEM50AO95807 157 aa8.86□□□□□ -0.99
NEK1-206ENST00000510533 CD55P08174 381 aa8.86□□□□□ -0.99
NEK1-206ENST00000510533 PAQR4Q8N4S7 273 aaPredicted RBP8.86□□□□□ -0.99
NEK1-206ENST00000510533 OTOFQ9HC10 1997 aa8.86□□□□□ -0.99
NEK1-206ENST00000510533 DICER1Q9UPY3 1922 aaKnown RBP8.86□□□□□ -0.99
NEK1-206ENST00000510533 C17orf100A8MU93 164 aa8.86□□□□□ -0.99
NEK1-206ENST00000510533 FABP5P3A8MUU1 101 aa8.86□□□□□ -0.99
NEK1-206ENST00000510533 CA1P00915 261 aaPredicted RBP8.86□□□□□ -0.99
NEK1-206ENST00000510533 EPDR1Q9UM22 224 aa8.86□□□□□ -0.99
NEK1-206ENST00000510533 A0A1W2PRE2 83 aa8.85□□□□□ -0.99
NEK1-206ENST00000510533 UBE2CO00762 179 aa8.85□□□□□ -0.99
NEK1-206ENST00000510533 RAMP3O60896 148 aa8.85□□□□□ -0.99
NEK1-206ENST00000510533 IGLV3-19P01714 112 aa8.85□□□□□ -0.99
NEK1-206ENST00000510533 MORN2Q502X0 79 aa8.85□□□□□ -0.99
NEK1-206ENST00000510533 NUP37Q8NFH4 326 aa8.85□□□□□ -0.99
NEK1-206ENST00000510533 WFDC1Q9HC57 220 aa8.85□□□□□ -0.99
NEK1-206ENST00000510533 CLDN16Q9Y5I7 305 aa8.85□□□□□ -0.99
NEK1-206ENST00000510533 ANKRD36A6QL64 1941 aa8.85□□□□□ -0.99
NEK1-206ENST00000510533 TDRD6O60522 2096 aaKnown RBP8.85□□□□□ -0.99
NEK1-206ENST00000510533 PGPEP1LA6NFU8 196 aa8.85□□□□□ -0.99
NEK1-206ENST00000510533 ZNF883P0CG24 379 aa8.85□□□□□ -0.99
NEK1-206ENST00000510533 PVRIGQ6DKI7 326 aa8.85□□□□□ -0.99
NEK1-206ENST00000510533 FAM71F2Q6NXP2 309 aa8.85□□□□□ -0.99
NEK1-206ENST00000510533 ASCL2Q99929 193 aa8.85□□□□□ -0.99
NEK1-206ENST00000510533 VCX2Q9H322 139 aa8.85□□□□□ -0.99
NEK1-206ENST00000510533 NEUROG3Q9Y4Z2 214 aa8.85□□□□□ -0.99
NEK1-206ENST00000510533 TRAV9-2A0A087WT02 112 aa8.85□□□□□ -0.99
NEK1-206ENST00000510533 NAPSAO96009 420 aa8.85□□□□□ -0.99
NEK1-206ENST00000510533 PF4P02776 101 aa8.85□□□□□ -0.99
NEK1-206ENST00000510533 CCL3L1P16619 93 aa8.85□□□□□ -0.99
NEK1-206ENST00000510533 FAM57AQ8TBR7 257 aa8.85□□□□□ -0.99
NEK1-206ENST00000510533 GFI1Q99684 422 aa8.85□□□□□ -0.99
NEK1-206ENST00000510533 IGLV3-12A0A075B6K2 115 aa8.85□□□□□ -0.99
NEK1-206ENST00000510533 NBR2O15453 112 aa8.85□□□□□ -0.99
NEK1-206ENST00000510533 LHX2P50458 406 aa8.85□□□□□ -0.99
NEK1-206ENST00000510533 OR10J3Q5JRS4 329 aa8.85□□□□□ -0.99
NEK1-206ENST00000510533 DERL1Q9BUN8 251 aa8.85□□□□□ -0.99
NEK1-206ENST00000510533 A0A0A6YYD4 124 aa8.84□□□□□ -0.99
NEK1-206ENST00000510533 TGFAP01135 160 aa8.84□□□□□ -0.99
NEK1-206ENST00000510533 UMODP07911 640 aa8.84□□□□□ -0.99
NEK1-206ENST00000510533 LINC00614P0C842 121 aa8.84□□□□□ -0.99
NEK1-206ENST00000510533 ZIC4Q8N9L1 334 aa8.84□□□□□ -0.99
NEK1-206ENST00000510533 ITLN2Q8WWU7 325 aaPredicted RBP8.84□□□□□ -0.99
NEK1-206ENST00000510533 TCRBV4S1A1TA0A5B7 111 aa8.84□□□□□ -0.99
NEK1-206ENST00000510533 HBDP02042 147 aa8.84□□□□□ -0.99
NEK1-206ENST00000510533 HEPN1Q6WQI6 88 aa8.84□□□□□ -0.99
NEK1-206ENST00000510533 C9orf106Q8NAJ2 232 aa8.84□□□□□ -0.99
NEK1-206ENST00000510533 OR4X2Q8NGF9 303 aa8.84□□□□□ -0.99
NEK1-206ENST00000510533 OCC1Q8TAD7 63 aa8.84□□□□□ -0.99
NEK1-206ENST00000510533 MBD3L1Q8WWY6 194 aa8.84□□□□□ -0.99
NEK1-206ENST00000510533 DMRTA2Q96SC8 542 aa8.84□□□□□ -0.99
NEK1-206ENST00000510533 SLC50A1Q9BRV3 221 aa8.84□□□□□ -0.99
NEK1-206ENST00000510533 GNB1LQ9BYB4 327 aa8.84□□□□□ -0.99
NEK1-206ENST00000510533 SCN2AQ99250 2005 aa8.84□□□□□ -0.99
NEK1-206ENST00000510533 IGLV3-32A0A0A0MS00 114 aa8.84□□□□□ -0.99
NEK1-206ENST00000510533 PYYP10082 97 aa8.84□□□□□ -0.99
NEK1-206ENST00000510533 VWCEQ96DN2 955 aa8.84□□□□□ -0.99
NEK1-206ENST00000510533 SPOCK3Q9BQ16 436 aa8.84□□□□□ -0.99
NEK1-206ENST00000510533 ZNF319Q9P2F9 582 aa8.84□□□□□ -0.99
NEK1-206ENST00000510533 IGKV1D-8A0A087WSZ0 117 aa8.83□□□□□ -1
NEK1-206ENST00000510533 CNTFRP26992 372 aa8.83□□□□□ -1
NEK1-206ENST00000510533 SAMD13Q5VXD3 122 aa8.83□□□□□ -1
NEK1-206ENST00000510533 RNF125Q96EQ8 232 aa8.83□□□□□ -1
NEK1-206ENST00000510533 DPH3Q96FX2 82 aa8.83□□□□□ -1
NEK1-206ENST00000510533 ZNF257Q9Y2Q1 563 aa8.83□□□□□ -1
NEK1-206ENST00000510533 EFNB3Q15768 340 aa8.83□□□□□ -1
NEK1-206ENST00000510533 DEPPQ9NTK1 212 aa8.83□□□□□ -1
NEK1-206ENST00000510533 TOMM7Q9P0U1 55 aa8.83□□□□□ -1
NEK1-206ENST00000510533 WDR83OSQ9Y284 106 aa8.83□□□□□ -1
NEK1-206ENST00000510533 FAM90A9PA6NNJ1 464 aa8.83□□□□□ -1
NEK1-206ENST00000510533 PRCDQ00LT1 54 aa8.83□□□□□ -1
NEK1-206ENST00000510533 TEX38Q6PEX7 206 aa8.83□□□□□ -1
NEK1-206ENST00000510533 BEND2Q8NDZ0 799 aa8.83□□□□□ -1
NEK1-206ENST00000510533 OR5AN1Q8NGI8 311 aa8.83□□□□□ -1
NEK1-206ENST00000510533 NHP2Q9NX24 153 aaKnown RBP8.83□□□□□ -1
NEK1-206ENST00000510533 RBBP6Q7Z6E9 1792 aaKnown RBP8.83□□□□□ -1
NEK1-206ENST00000510533 OR9G9P0C7N8 305 aa8.83□□□□□ -1
NEK1-206ENST00000510533 CACNG7P62955 275 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms