RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 TEX13DA0A0J9YY54 714 aaPredicted RBP13.94□□□□□ -0.18
LSM6-206ENST00000510331 FABP12A6NFH5 140 aa13.94□□□□□ -0.18
LSM6-206ENST00000510331 ATG12O94817 140 aa13.94□□□□□ -0.18
LSM6-206ENST00000510331 MT-CO2P00403 227 aa13.94□□□□□ -0.18
LSM6-206ENST00000510331 C8orf88P0DMB2 117 aa13.94□□□□□ -0.18
LSM6-206ENST00000510331 HAGHQ16775 308 aa13.94□□□□□ -0.18
LSM6-206ENST00000510331 DEFB125Q8N687 156 aa13.94□□□□□ -0.18
LSM6-206ENST00000510331 PINX1Q96BK5 328 aaKnown RBP13.94□□□□□ -0.18
LSM6-206ENST00000510331 ATP6V0BQ99437 205 aa13.94□□□□□ -0.18
LSM6-206ENST00000510331 DAZ1Q9NQZ3 744 aaKnown RBP13.94□□□□□ -0.18
LSM6-206ENST00000510331 V9GYH0 126 aa13.94□□□□□ -0.18
LSM6-206ENST00000510331 CRYM-AS1A6NIL9 109 aa13.93□□□□□ -0.18
LSM6-206ENST00000510331 NDUFA4O00483 81 aa13.93□□□□□ -0.18
LSM6-206ENST00000510331 ZNF207O43670 478 aaKnown RBP13.93□□□□□ -0.18
LSM6-206ENST00000510331 B3GALNT1O75752 331 aa13.93□□□□□ -0.18
LSM6-206ENST00000510331 IFNA17P01571 189 aa13.93□□□□□ -0.18
LSM6-206ENST00000510331 HOXA1P49639 335 aaPredicted RBP13.93□□□□□ -0.18
LSM6-206ENST00000510331 ELLP55199 621 aaPredicted RBP13.93□□□□□ -0.18
LSM6-206ENST00000510331 GLYATL2Q8WU03 294 aa13.93□□□□□ -0.18
LSM6-206ENST00000510331 TRIM63Q969Q1 353 aa13.93□□□□□ -0.18
LSM6-206ENST00000510331 MARC2Q969Z3 335 aa13.93□□□□□ -0.18
LSM6-206ENST00000510331 TMEM230Q96A57 120 aa13.93□□□□□ -0.18
LSM6-206ENST00000510331 RRNAD1Q96FB5 475 aaKnown RBP13.93□□□□□ -0.18
LSM6-206ENST00000510331 PDCD10Q9BUL8 212 aa13.93□□□□□ -0.18
LSM6-206ENST00000510331 C20orf24Q9BUV8 137 aa13.93□□□□□ -0.18
LSM6-206ENST00000510331 SRD5A3Q9H8P0 318 aa13.93□□□□□ -0.18
LSM6-206ENST00000510331 MCUBQ9NWR8 336 aa13.93□□□□□ -0.18
LSM6-206ENST00000510331 PRR13Q9NZ81 148 aa13.93□□□□□ -0.18
LSM6-206ENST00000510331 GPR132Q9UNW8 380 aa13.93□□□□□ -0.18
LSM6-206ENST00000510331 CDS2O95674 445 aa13.92□□□□□ -0.18
LSM6-206ENST00000510331 CTSGP08311 255 aa13.92□□□□□ -0.18
LSM6-206ENST00000510331 ERHP84090 104 aaKnown RBP13.92□□□□□ -0.18
LSM6-206ENST00000510331 Q6ZRM9 215 aa13.92□□□□□ -0.18
LSM6-206ENST00000510331 RBPMSQ93062 196 aaKnown RBP13.92□□□□□ -0.18
LSM6-206ENST00000510331 RETNQ9HD89 108 aa13.92□□□□□ -0.18
LSM6-206ENST00000510331 MRPL27Q9P0M9 148 aaKnown RBP13.92□□□□□ -0.18
LSM6-206ENST00000510331 OR11H12B2RN74 326 aa13.91□□□□□ -0.18
LSM6-206ENST00000510331 ETV6P41212 452 aa13.91□□□□□ -0.18
LSM6-206ENST00000510331 ZNF79Q15937 498 aa13.91□□□□□ -0.18
LSM6-206ENST00000510331 TMEM268Q5VZI3 342 aa13.91□□□□□ -0.18
LSM6-206ENST00000510331 SELENOHQ8IZQ5 122 aaKnown RBP13.91□□□□□ -0.18
LSM6-206ENST00000510331 SPATA25Q9BR10 227 aa13.91□□□□□ -0.18
LSM6-206ENST00000510331 RBMY1BA6NDE4 496 aaKnown RBP13.9□□□□□ -0.18
LSM6-206ENST00000510331 RBMY1EA6NEQ0 496 aaKnown RBP13.9□□□□□ -0.18
LSM6-206ENST00000510331 INS-IGF2F8WCM5 200 aa13.9□□□□□ -0.18
LSM6-206ENST00000510331 RBMY1DP0C7P1 496 aaKnown RBP13.9□□□□□ -0.18
LSM6-206ENST00000510331 RNASE2P10153 161 aaKnown RBP13.9□□□□□ -0.18
LSM6-206ENST00000510331 FCGR2BP31994 310 aaPredicted RBP13.9□□□□□ -0.18
LSM6-206ENST00000510331 MFAP4P55083 255 aa13.9□□□□□ -0.18
LSM6-206ENST00000510331 KLF9Q13886 244 aaPredicted RBP13.9□□□□□ -0.18
LSM6-206ENST00000510331 PYDC2Q56P42 97 aa13.9□□□□□ -0.18
LSM6-206ENST00000510331 LINC00322Q6ZN03 302 aaPredicted RBP13.9□□□□□ -0.18
LSM6-206ENST00000510331 SLC16A13Q7RTY0 426 aa13.9□□□□□ -0.18
LSM6-206ENST00000510331 FAM219AQ8IW50 185 aa13.9□□□□□ -0.18
LSM6-206ENST00000510331 OR52B4Q8NGK2 314 aa13.9□□□□□ -0.18
LSM6-206ENST00000510331 CACNG5Q9UF02 275 aa13.9□□□□□ -0.18
LSM6-206ENST00000510331 SCP2D1Q9UJQ7 156 aa13.9□□□□□ -0.18
LSM6-206ENST00000510331 NUPL2O15504 423 aaKnown RBP13.89□□□□□ -0.19
LSM6-206ENST00000510331 SNCAP37840 140 aa13.89□□□□□ -0.19
LSM6-206ENST00000510331 DHODHQ02127 395 aa13.89□□□□□ -0.19
LSM6-206ENST00000510331 AARDQ4LEZ3 155 aa13.89□□□□□ -0.19
LSM6-206ENST00000510331 RBPMS2Q6ZRY4 209 aaKnown RBP13.89□□□□□ -0.19
LSM6-206ENST00000510331 ENY2Q9NPA8 101 aa13.89□□□□□ -0.19
LSM6-206ENST00000510331 GAR1Q9NY12 217 aaKnown RBP13.89□□□□□ -0.19
LSM6-206ENST00000510331 STARD9Q9P2P6 4700 aa13.89□□□□□ -0.19
LSM6-206ENST00000510331 TRAV25A0A0B4J276 109 aa13.88□□□□□ -0.19
LSM6-206ENST00000510331 GNG7O60262 68 aa13.88□□□□□ -0.19
LSM6-206ENST00000510331 NXPH3O95157 252 aa13.88□□□□□ -0.19
LSM6-206ENST00000510331 RELQ04864 619 aaPredicted RBP13.88□□□□□ -0.19
LSM6-206ENST00000510331 PVRIGQ6DKI7 326 aa13.88□□□□□ -0.19
LSM6-206ENST00000510331 MUC7Q8TAX7 377 aa13.88□□□□□ -0.19
LSM6-206ENST00000510331 GPR146Q96CH1 333 aa13.88□□□□□ -0.19
LSM6-206ENST00000510331 TXN2Q99757 166 aa13.88□□□□□ -0.19
LSM6-206ENST00000510331 FAM110AQ9BQ89 295 aa13.88□□□□□ -0.19
LSM6-206ENST00000510331 IGHV3-49A0A0A0MS15 119 aa13.87□□□□□ -0.19
LSM6-206ENST00000510331 C15orf62A8K5M9 175 aa13.87□□□□□ -0.19
LSM6-206ENST00000510331 YIF1AO95070 293 aa13.87□□□□□ -0.19
LSM6-206ENST00000510331 AKR1C4P17516 323 aa13.87□□□□□ -0.19
LSM6-206ENST00000510331 SUPT4H1P63272 117 aaKnown RBP13.87□□□□□ -0.19
LSM6-206ENST00000510331 TMEM187Q14656 261 aa13.87□□□□□ -0.19
LSM6-206ENST00000510331 BSXQ3C1V8 233 aa13.87□□□□□ -0.19
LSM6-206ENST00000510331 CCDC190Q86UF4 302 aa13.87□□□□□ -0.19
LSM6-206ENST00000510331 CITED4Q96RK1 184 aa13.87□□□□□ -0.19
LSM6-206ENST00000510331 SPAG8Q99932 426 aaPredicted RBP13.87□□□□□ -0.19
LSM6-206ENST00000510331 FNDC4Q9H6D8 234 aaPredicted RBP13.87□□□□□ -0.19
LSM6-206ENST00000510331 MRPL36Q9P0J6 103 aaKnown RBP13.87□□□□□ -0.19
LSM6-206ENST00000510331 TMEM56-RWDD3S4R434 201 aa13.87□□□□□ -0.19
LSM6-206ENST00000510331 K7EMT4 169 aa13.86□□□□□ -0.19
LSM6-206ENST00000510331 S100A5P33763 92 aa13.86□□□□□ -0.19
LSM6-206ENST00000510331 SPCS3P61009 180 aa13.86□□□□□ -0.19
LSM6-206ENST00000510331 TOMM5Q8N4H5 51 aa13.86□□□□□ -0.19
LSM6-206ENST00000510331 GALNT14Q96FL9 552 aa13.86□□□□□ -0.19
LSM6-206ENST00000510331 OR10C1Q96KK4 312 aa13.86□□□□□ -0.19
LSM6-206ENST00000510331 HIPK2Q9H2X6 1198 aa13.86□□□□□ -0.19
LSM6-206ENST00000510331 EDA2RQ9HAV5 297 aa13.86□□□□□ -0.19
LSM6-206ENST00000510331 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.86□□□□□ -0.19
LSM6-206ENST00000510331 IGHV7-4-1A0A0J9YVY3 117 aa13.85□□□□□ -0.19
LSM6-206ENST00000510331 C3orf84H3BNL1 204 aa13.85□□□□□ -0.19
LSM6-206ENST00000510331 CORTO00230 105 aa13.85□□□□□ -0.19
LSM6-206ENST00000510331 TSPAN4O14817 238 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms