RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 OR2C3Q8N628 320 aa11.32□□□□□ -0.6
HMGCL-208ENST00000509389 OR11H1Q8NG94 326 aa11.32□□□□□ -0.6
HMGCL-208ENST00000509389 OR5B3Q8NH48 314 aa11.32□□□□□ -0.6
HMGCL-208ENST00000509389 OR4A16Q8NH70 328 aa11.32□□□□□ -0.6
HMGCL-208ENST00000509389 MYOZ3Q8TDC0 251 aa11.32□□□□□ -0.6
HMGCL-208ENST00000509389 MAGT1Q9H0U3 335 aa11.32□□□□□ -0.6
HMGCL-208ENST00000509389 RBKSQ9H477 322 aa11.32□□□□□ -0.6
HMGCL-208ENST00000509389 BCL2L11O43521 198 aa11.31□□□□□ -0.6
HMGCL-208ENST00000509389 CNTFRP26992 372 aa11.31□□□□□ -0.6
HMGCL-208ENST00000509389 PPIFP30405 207 aaKnown RBP11.31□□□□□ -0.6
HMGCL-208ENST00000509389 HSPE1P61604 102 aaKnown RBP11.31□□□□□ -0.6
HMGCL-208ENST00000509389 PRCDQ00LT1 54 aa11.31□□□□□ -0.6
HMGCL-208ENST00000509389 KIAA0141Q14154 515 aaPredicted RBP11.31□□□□□ -0.6
HMGCL-208ENST00000509389 TMEM14EPQ6UXP3 125 aa11.31□□□□□ -0.6
HMGCL-208ENST00000509389 INO80EQ8NBZ0 244 aaPredicted RBP11.31□□□□□ -0.6
HMGCL-208ENST00000509389 CIB3Q96Q77 187 aaPredicted RBP11.31□□□□□ -0.6
HMGCL-208ENST00000509389 KLK15Q9H2R5 256 aa11.31□□□□□ -0.6
HMGCL-208ENST00000509389 ZNF430Q9H8G1 570 aaPredicted RBP11.31□□□□□ -0.6
HMGCL-208ENST00000509389 GNB4Q9HAV0 340 aa11.31□□□□□ -0.6
HMGCL-208ENST00000509389 TPSG1Q9NRR2 321 aa11.31□□□□□ -0.6
HMGCL-208ENST00000509389 SORL1Q92673 2214 aa11.31□□□□□ -0.6
HMGCL-208ENST00000509389 IGSF23A1L1A6 192 aa11.3□□□□□ -0.6
HMGCL-208ENST00000509389 CGB1A6NKQ9 187 aa11.3□□□□□ -0.6
HMGCL-208ENST00000509389 G3V318 75 aa11.3□□□□□ -0.6
HMGCL-208ENST00000509389 WRBO00258 174 aa11.3□□□□□ -0.6
HMGCL-208ENST00000509389 RRHO14718 337 aa11.3□□□□□ -0.6
HMGCL-208ENST00000509389 ATP6V0E1O15342 81 aa11.3□□□□□ -0.6
HMGCL-208ENST00000509389 SLC25A17O43808 307 aa11.3□□□□□ -0.6
HMGCL-208ENST00000509389 NXPH3O95157 252 aa11.3□□□□□ -0.6
HMGCL-208ENST00000509389 C4BPBP20851 252 aa11.3□□□□□ -0.6
HMGCL-208ENST00000509389 RPL12P30050 165 aaKnown RBP11.3□□□□□ -0.6
HMGCL-208ENST00000509389 RPL8P62917 257 aaKnown RBP11.3□□□□□ -0.6
HMGCL-208ENST00000509389 IFITM2Q01629 132 aa11.3□□□□□ -0.6
HMGCL-208ENST00000509389 EWSR1Q01844 656 aaKnown RBP eCLIP11.3□□□□□ -0.6
HMGCL-208ENST00000509389 BAXQ07812 192 aa11.3□□□□□ -0.6
HMGCL-208ENST00000509389 OPCMLQ14982 345 aa11.3□□□□□ -0.6
HMGCL-208ENST00000509389 PRSS8Q16651 343 aa11.3□□□□□ -0.6
HMGCL-208ENST00000509389 BSXQ3C1V8 233 aa11.3□□□□□ -0.6
HMGCL-208ENST00000509389 ASPHD1Q5U4P2 390 aa11.3□□□□□ -0.6
HMGCL-208ENST00000509389 TMEM252Q8N6L7 170 aa11.3□□□□□ -0.6
HMGCL-208ENST00000509389 ZNF491Q8N8L2 437 aa11.3□□□□□ -0.6
HMGCL-208ENST00000509389 DTD1Q8TEA8 209 aa11.3□□□□□ -0.6
HMGCL-208ENST00000509389 UBE2E2Q96LR5 201 aa11.3□□□□□ -0.6
HMGCL-208ENST00000509389 NDUFA4L2Q9NRX3 87 aa11.3□□□□□ -0.6
HMGCL-208ENST00000509389 FKBP11Q9NYL4 201 aa11.3□□□□□ -0.6
HMGCL-208ENST00000509389 U3KQK5 164 aa11.3□□□□□ -0.6
HMGCL-208ENST00000509389 STAB2Q8WWQ8 2551 aa11.29□□□□□ -0.6
HMGCL-208ENST00000509389 IGHV7-81A0A0B4J1V7 117 aa11.29□□□□□ -0.6
HMGCL-208ENST00000509389 I3L521 148 aa11.29□□□□□ -0.6
HMGCL-208ENST00000509389 RGS13O14921 159 aa11.29□□□□□ -0.6
HMGCL-208ENST00000509389 NBR2O15453 112 aa11.29□□□□□ -0.6
HMGCL-208ENST00000509389 IGLV1-40P01703 118 aa11.29□□□□□ -0.6
HMGCL-208ENST00000509389 HLA-DRB1P01911 266 aa11.29□□□□□ -0.6
HMGCL-208ENST00000509389 MAS1LP35410 378 aa11.29□□□□□ -0.6
HMGCL-208ENST00000509389 MMD2Q8IY49 270 aa11.29□□□□□ -0.6
HMGCL-208ENST00000509389 OR1N2Q8NGR9 330 aa11.29□□□□□ -0.6
HMGCL-208ENST00000509389 STOML3Q8TAV4 291 aa11.29□□□□□ -0.6
HMGCL-208ENST00000509389 ARL6Q9H0F7 186 aa11.29□□□□□ -0.6
HMGCL-208ENST00000509389 PARP11Q9NR21 331 aa11.29□□□□□ -0.6
HMGCL-208ENST00000509389 CYTL1Q9NRR1 136 aa11.29□□□□□ -0.6
HMGCL-208ENST00000509389 OR51B2Q9Y5P1 312 aa11.29□□□□□ -0.6
HMGCL-208ENST00000509389 TRAV41A0A0B4J266 112 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 TEX50A0A1B0GTY4 177 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 A0A1B0GW64 132 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 PMS2P5A8MQ11 134 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 OR8U8P0C7N1 319 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 VAMP2P63027 116 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 RUNX1Q01196 453 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 C5orf64Q2M2E5 130 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 PPP1R27Q86WC6 154 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 OR5B12Q96R08 314 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 ASCL2Q99929 193 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 SLA2Q9H6Q3 261 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 ZNF256Q9Y2P7 627 aaPredicted RBP11.28□□□□□ -0.6
HMGCL-208ENST00000509389 FAM24AA6NFZ4 105 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 C15orf62A8K5M9 175 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 TAAR5O14804 337 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 SCAF4O95104 1147 aaKnown RBP11.28□□□□□ -0.6
HMGCL-208ENST00000509389 IAPPP10997 89 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 MYOD1P15172 320 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 NUP62P37198 522 aaPredicted RBP11.28□□□□□ -0.6
HMGCL-208ENST00000509389 RAB9AP51151 201 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 GNB1P62873 340 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 ZNF616Q08AN1 781 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 PVRIGQ6DKI7 326 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 SLC51BQ86UW2 128 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 HAPLN4Q86UW8 402 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 OR1L8Q8NGR8 309 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 OR4C12Q96R67 309 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 ARPC5LQ9BPX5 153 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 SLC25A31Q9H0C2 315 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 METTL1Q9UBP6 276 aaKnown RBP11.28□□□□□ -0.6
HMGCL-208ENST00000509389 FBXL17Q9UF56 701 aa11.28□□□□□ -0.6
HMGCL-208ENST00000509389 PRSS46E5RG02 174 aa11.27□□□□□ -0.61
HMGCL-208ENST00000509389 E7EUB6 86 aa11.27□□□□□ -0.61
HMGCL-208ENST00000509389 RBMXL2O75526 392 aaKnown RBP11.27□□□□□ -0.61
HMGCL-208ENST00000509389 IFNA17P01571 189 aa11.27□□□□□ -0.61
HMGCL-208ENST00000509389 SULT1A1P50225 295 aa11.27□□□□□ -0.61
HMGCL-208ENST00000509389 INSL3P51460 131 aa11.27□□□□□ -0.61
HMGCL-208ENST00000509389 CAV2P51636 162 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms