RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 TXN2Q99757 166 aa14.06□□□□□ -0.16
UBE3D-207ENST00000509102 C20orf24Q9BUV8 137 aa14.06□□□□□ -0.16
UBE3D-207ENST00000509102 SLIRPQ9GZT3 109 aaKnown RBP14.06□□□□□ -0.16
UBE3D-207ENST00000509102 CEPT1Q9Y6K0 416 aa14.06□□□□□ -0.16
UBE3D-207ENST00000509102 GSTZ1O43708 216 aaPredicted RBP14.05□□□□□ -0.16
UBE3D-207ENST00000509102 SCAF4O95104 1147 aaKnown RBP14.05□□□□□ -0.16
UBE3D-207ENST00000509102 CD7P09564 240 aa14.05□□□□□ -0.16
UBE3D-207ENST00000509102 C8orf88P0DMB2 117 aa14.05□□□□□ -0.16
UBE3D-207ENST00000509102 HOXA1P49639 335 aaPredicted RBP14.05□□□□□ -0.16
UBE3D-207ENST00000509102 DHODHQ02127 395 aa14.05□□□□□ -0.16
UBE3D-207ENST00000509102 HAGHQ16775 308 aa14.05□□□□□ -0.16
UBE3D-207ENST00000509102 LAMTOR1Q6IAA8 161 aa14.05□□□□□ -0.16
UBE3D-207ENST00000509102 FAM219AQ8IW50 185 aa14.05□□□□□ -0.16
UBE3D-207ENST00000509102 PINX1Q96BK5 328 aaKnown RBP14.05□□□□□ -0.16
UBE3D-207ENST00000509102 TMEM222Q9H0R3 208 aa14.05□□□□□ -0.16
UBE3D-207ENST00000509102 NAA60Q9H7X0 242 aa14.05□□□□□ -0.16
UBE3D-207ENST00000509102 CORTO00230 105 aa14.04□□□□□ -0.16
UBE3D-207ENST00000509102 ST8SIA3O43173 380 aa14.04□□□□□ -0.16
UBE3D-207ENST00000509102 GNG7O60262 68 aa14.04□□□□□ -0.16
UBE3D-207ENST00000509102 IZUMO4Q1ZYL8 232 aa14.04□□□□□ -0.16
UBE3D-207ENST00000509102 DEFB125Q8N687 156 aa14.04□□□□□ -0.16
UBE3D-207ENST00000509102 MUC7Q8TAX7 377 aa14.04□□□□□ -0.16
UBE3D-207ENST00000509102 CHRDL1Q9BU40 450 aa14.04□□□□□ -0.16
UBE3D-207ENST00000509102 C5orf66Q9H5L9 145 aa14.04□□□□□ -0.16
UBE3D-207ENST00000509102 SRD5A3Q9H8P0 318 aa14.04□□□□□ -0.16
UBE3D-207ENST00000509102 MCUBQ9NWR8 336 aa14.04□□□□□ -0.16
UBE3D-207ENST00000509102 A0A0B4J293 547 aa14.03□□□□□ -0.16
UBE3D-207ENST00000509102 ANKRD20A5PA0PJZ0 165 aa14.03□□□□□ -0.16
UBE3D-207ENST00000509102 C15orf62A8K5M9 175 aa14.03□□□□□ -0.16
UBE3D-207ENST00000509102 K7EMT4 169 aa14.03□□□□□ -0.16
UBE3D-207ENST00000509102 MT-CO2P00403 227 aa14.03□□□□□ -0.16
UBE3D-207ENST00000509102 OR5AC1P0C628 307 aa14.03□□□□□ -0.16
UBE3D-207ENST00000509102 FCGR2BP31994 310 aaPredicted RBP14.03□□□□□ -0.16
UBE3D-207ENST00000509102 TNFSF8P32971 234 aa14.03□□□□□ -0.16
UBE3D-207ENST00000509102 S100A5P33763 92 aa14.03□□□□□ -0.16
UBE3D-207ENST00000509102 FAUP35544 74 aaKnown RBP14.03□□□□□ -0.16
UBE3D-207ENST00000509102 NPBWR1P48145 328 aa14.03□□□□□ -0.16
UBE3D-207ENST00000509102 SPINK9Q5DT21 86 aa14.03□□□□□ -0.16
UBE3D-207ENST00000509102 OR51S1Q8NGJ8 323 aa14.03□□□□□ -0.16
UBE3D-207ENST00000509102 RBPMSQ93062 196 aaKnown RBP14.03□□□□□ -0.16
UBE3D-207ENST00000509102 KCNIP3Q9Y2W7 256 aa14.03□□□□□ -0.16
UBE3D-207ENST00000509102 SELENOKQ9Y6D0 94 aa14.03□□□□□ -0.16
UBE3D-207ENST00000509102 INS-IGF2F8WCM5 200 aa14.02□□□□□ -0.17
UBE3D-207ENST00000509102 I3L2K1 104 aa14.02□□□□□ -0.17
UBE3D-207ENST00000509102 SCGB2A1O75556 95 aa14.02□□□□□ -0.17
UBE3D-207ENST00000509102 YIF1AO95070 293 aa14.02□□□□□ -0.17
UBE3D-207ENST00000509102 CDS2O95674 445 aa14.02□□□□□ -0.17
UBE3D-207ENST00000509102 CTSGP08311 255 aa14.02□□□□□ -0.17
UBE3D-207ENST00000509102 P0C879 139 aa14.02□□□□□ -0.17
UBE3D-207ENST00000509102 AP3S2P59780 193 aa14.02□□□□□ -0.17
UBE3D-207ENST00000509102 DUSP18Q8NEJ0 188 aa14.02□□□□□ -0.17
UBE3D-207ENST00000509102 CITED4Q96RK1 184 aa14.02□□□□□ -0.17
UBE3D-207ENST00000509102 SPAG8Q99932 426 aaPredicted RBP14.02□□□□□ -0.17
UBE3D-207ENST00000509102 RTBDNQ9BSG5 229 aaPredicted RBP14.02□□□□□ -0.17
UBE3D-207ENST00000509102 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.02□□□□□ -0.17
UBE3D-207ENST00000509102 CACFD1Q9UGQ2 172 aa14.02□□□□□ -0.17
UBE3D-207ENST00000509102 GPR132Q9UNW8 380 aa14.02□□□□□ -0.17
UBE3D-207ENST00000509102 CRYM-AS1A6NIL9 109 aa14.01□□□□□ -0.17
UBE3D-207ENST00000509102 F8W735 103 aaPredicted RBP14.01□□□□□ -0.17
UBE3D-207ENST00000509102 ADMP35318 185 aa14.01□□□□□ -0.17
UBE3D-207ENST00000509102 ETV6P41212 452 aa14.01□□□□□ -0.17
UBE3D-207ENST00000509102 NXF2Q9GZY0 626 aaKnown RBP14.01□□□□□ -0.17
UBE3D-207ENST00000509102 PIGBOS1A0A0B4J2F0 54 aa14□□□□□ -0.17
UBE3D-207ENST00000509102 BMI1P35226 326 aa14□□□□□ -0.17
UBE3D-207ENST00000509102 SPCS3P61009 180 aa14□□□□□ -0.17
UBE3D-207ENST00000509102 PYDC2Q56P42 97 aa14□□□□□ -0.17
UBE3D-207ENST00000509102 TMEM268Q5VZI3 342 aa14□□□□□ -0.17
UBE3D-207ENST00000509102 GLYATL2Q8WU03 294 aa14□□□□□ -0.17
UBE3D-207ENST00000509102 GINS3Q9BRX5 216 aa14□□□□□ -0.17
UBE3D-207ENST00000509102 TSPAN4O14817 238 aa13.99□□□□□ -0.17
UBE3D-207ENST00000509102 ANXA3P12429 323 aa13.99□□□□□ -0.17
UBE3D-207ENST00000509102 LYL1P12980 280 aa13.99□□□□□ -0.17
UBE3D-207ENST00000509102 OR52E5Q8NH55 327 aa13.99□□□□□ -0.17
UBE3D-207ENST00000509102 WFDC10AQ9H1F0 79 aa13.99□□□□□ -0.17
UBE3D-207ENST00000509102 HUWE1Q7Z6Z7 4374 aaKnown RBP13.98□□□□□ -0.17
UBE3D-207ENST00000509102 IGHV3OR16-8A0A075B7F1 116 aa13.98□□□□□ -0.17
UBE3D-207ENST00000509102 OR4C46A6NHA9 309 aa13.98□□□□□ -0.17
UBE3D-207ENST00000509102 ZNF207O43670 478 aaKnown RBP13.98□□□□□ -0.17
UBE3D-207ENST00000509102 IGHV3-48P01763 117 aa13.98□□□□□ -0.17
UBE3D-207ENST00000509102 OPRK1P41145 380 aa13.98□□□□□ -0.17
UBE3D-207ENST00000509102 LINC00322Q6ZN03 302 aaPredicted RBP13.98□□□□□ -0.17
UBE3D-207ENST00000509102 SELENOHQ8IZQ5 122 aaKnown RBP13.98□□□□□ -0.17
UBE3D-207ENST00000509102 IL22RA2Q969J5 263 aa13.98□□□□□ -0.17
UBE3D-207ENST00000509102 SOSTQ9BQB4 213 aa13.98□□□□□ -0.17
UBE3D-207ENST00000509102 HEYLQ9NQ87 328 aaPredicted RBP13.98□□□□□ -0.17
UBE3D-207ENST00000509102 TRAV14DV4A0A0A6YYC5 116 aa13.97□□□□□ -0.17
UBE3D-207ENST00000509102 A0A0G2JRQ6 117 aa13.97□□□□□ -0.17
UBE3D-207ENST00000509102 RPS10-NUDT3A0A1W2PQS6 291 aa13.97□□□□□ -0.17
UBE3D-207ENST00000509102 HTR2BP41595 481 aa13.97□□□□□ -0.17
UBE3D-207ENST00000509102 SRPXP78539 464 aa13.97□□□□□ -0.17
UBE3D-207ENST00000509102 TOMM5Q8N4H5 51 aa13.97□□□□□ -0.17
UBE3D-207ENST00000509102 TMEM116Q8NCL8 245 aa13.97□□□□□ -0.17
UBE3D-207ENST00000509102 GALNT14Q96FL9 552 aa13.97□□□□□ -0.17
UBE3D-207ENST00000509102 GGTLC1Q9BX51 225 aa13.97□□□□□ -0.17
UBE3D-207ENST00000509102 CACNG5Q9UF02 275 aa13.97□□□□□ -0.17
UBE3D-207ENST00000509102 SMPXQ9UHP9 88 aa13.97□□□□□ -0.17
UBE3D-207ENST00000509102 TMEM56-RWDD3S4R434 201 aa13.97□□□□□ -0.17
UBE3D-207ENST00000509102 LOC102724200A0A096LPH7 203 aaPredicted RBP13.96□□□□□ -0.17
UBE3D-207ENST00000509102 IGHV7-4-1A0A0J9YVY3 117 aa13.96□□□□□ -0.17
UBE3D-207ENST00000509102 RBMY1BA6NDE4 496 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms