RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 AADACL3Q5VUY0 350 aa2.66□□□□□ -1.98
UBE2D3-226ENST00000508635 PRR27Q6MZM9 219 aa2.66□□□□□ -1.98
UBE2D3-226ENST00000508635 ZNF562Q6V9R5 426 aa2.66□□□□□ -1.98
UBE2D3-226ENST00000508635 ZNF645Q8N7E2 425 aa2.66□□□□□ -1.98
UBE2D3-226ENST00000508635 ZNF491Q8N8L2 437 aa2.66□□□□□ -1.98
UBE2D3-226ENST00000508635 TMEM229BQ8NBD8 167 aa2.66□□□□□ -1.98
UBE2D3-226ENST00000508635 DRAXINQ8NBI3 349 aaPredicted RBP2.66□□□□□ -1.98
UBE2D3-226ENST00000508635 OR11H1Q8NG94 326 aa2.66□□□□□ -1.98
UBE2D3-226ENST00000508635 OR1N2Q8NGR9 330 aa2.66□□□□□ -1.98
UBE2D3-226ENST00000508635 OR6F1Q8NGZ6 308 aa2.66□□□□□ -1.98
UBE2D3-226ENST00000508635 MOB3AQ96BX8 217 aa2.66□□□□□ -1.98
UBE2D3-226ENST00000508635 ADTRPQ96IZ2 230 aa2.66□□□□□ -1.98
UBE2D3-226ENST00000508635 HSD17B10Q99714 261 aaKnown RBP2.66□□□□□ -1.98
UBE2D3-226ENST00000508635 B9D2Q9BPU9 175 aa2.66□□□□□ -1.98
UBE2D3-226ENST00000508635 GINS4Q9BRT9 223 aa2.66□□□□□ -1.98
UBE2D3-226ENST00000508635 FBXL15Q9H469 300 aa2.66□□□□□ -1.98
UBE2D3-226ENST00000508635 GNB4Q9HAV0 340 aa2.66□□□□□ -1.98
UBE2D3-226ENST00000508635 PARP11Q9NR21 331 aa2.66□□□□□ -1.98
UBE2D3-226ENST00000508635 METTL1Q9UBP6 276 aaKnown RBP2.66□□□□□ -1.98
UBE2D3-226ENST00000508635 KLK11Q9UBX7 282 aa2.66□□□□□ -1.98
UBE2D3-226ENST00000508635 ZMAT5Q9UDW3 170 aaKnown RBP2.66□□□□□ -1.98
UBE2D3-226ENST00000508635 RSL24D1Q9UHA3 163 aaKnown RBP2.66□□□□□ -1.98
UBE2D3-226ENST00000508635 VSIG4Q9Y279 399 aa2.66□□□□□ -1.98
UBE2D3-226ENST00000508635 WDR83OSQ9Y284 106 aa2.66□□□□□ -1.98
UBE2D3-226ENST00000508635 WASHC3Q9Y3C0 194 aa2.66□□□□□ -1.98
UBE2D3-226ENST00000508635 FBXO7Q9Y3I1 522 aa2.66□□□□□ -1.98
UBE2D3-226ENST00000508635 NUBP2Q9Y5Y2 271 aa2.66□□□□□ -1.98
UBE2D3-226ENST00000508635 COL7A1Q02388 2944 aa2.65□□□□□ -1.98
UBE2D3-226ENST00000508635 FABP12A6NFH5 140 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 MSGN1A6NI15 193 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 SEC14L6B5MCN3 397 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 M0R1X1 148 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 ARPC1BO15143 372 aaKnown RBP2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 RBFOX2O43251 390 aaKnown RBP eCLIP2.65□□□□□ -1.991e-7■□□□□ 10
UBE2D3-226ENST00000508635 PGLYRP1O75594 196 aaPredicted RBP2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 CA2P00918 260 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 PPYP01298 95 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 IGLV2-23P01705 113 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 PMP2P02689 132 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 LGALS1P09382 135 aaKnown RBP2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 OR8U8P0C7N1 319 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 ZNF735P0CB33 412 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 HLA-DMAP28067 261 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 RCVRNP35243 200 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 HRH1P35367 487 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 MRPS10P82664 201 aaKnown RBP2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 TMEM267Q0VDI3 215 aaPredicted RBP2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 POU2AF1Q16633 256 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 ECSCRQ19T08 205 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 KLK9Q2XQG4 91 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 AKIRIN2Q53H80 203 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 C9orf66Q5T8R8 295 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 PYHIN1Q6K0P9 492 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 LPCAT3Q6P1A2 487 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 UNQ5815/PRO19632Q6UWF5 114 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 LINC00299Q6ZSB3 139 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 PPP1R27Q86WC6 154 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 LHFPL1Q86WI0 220 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 PDPNQ86YL7 162 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 SNX29P2Q8IUI4 249 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 LAX1Q8IWV1 398 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 TCTEX1D1Q8N7M0 179 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 LFNGQ8NES3 379 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 OR6Q1Q8NGQ2 317 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 TERB2Q8NHR7 220 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 MCFD2Q8NI22 146 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 CD300LFQ8TDQ1 290 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 CASTOR1Q8WTX7 329 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 DCUN1D4Q92564 292 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 DLX4Q92988 240 aaPredicted RBP2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 MRGPRFQ96AM1 343 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 FLYWCH2Q96CP2 140 aaKnown RBP2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 ZNF486Q96H40 463 aaPredicted RBP2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 DIRAS2Q96HU8 199 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 LINC00479Q96M42 142 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 OR5B12Q96R08 314 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 CLCC1Q96S66 551 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 TSNAXQ99598 290 aaKnown RBP2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 OPRPNQ99935 248 aaPredicted RBP2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 FAM103A1Q9BTL3 118 aaKnown RBP2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 SLC5A7Q9GZV3 580 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 ALX4Q9H161 411 aaPredicted RBP2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 OR2D2Q9H210 308 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 CCL28Q9NRJ3 127 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 FAM212BQ9NTI7 297 aaPredicted RBP2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 EXTL2Q9UBQ6 330 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 KLK9Q9UKQ9 250 aa2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 FOXA2Q9Y261 457 aaPredicted RBP2.65□□□□□ -1.99
UBE2D3-226ENST00000508635 RYR3Q15413 4870 aa2.64□□□□□ -1.99
UBE2D3-226ENST00000508635 ANKRD20A5PA0PJZ0 165 aa2.64□□□□□ -1.99
UBE2D3-226ENST00000508635 MEIS3P1A6NDR6 274 aa2.64□□□□□ -1.99
UBE2D3-226ENST00000508635 FAM25AB3EWG3 89 aa2.64□□□□□ -1.99
UBE2D3-226ENST00000508635 FAM25CB3EWG5 89 aa2.64□□□□□ -1.99
UBE2D3-226ENST00000508635 FAM25GB3EWG6 89 aa2.64□□□□□ -1.99
UBE2D3-226ENST00000508635 LINC01619G3V211 115 aa2.64□□□□□ -1.99
UBE2D3-226ENST00000508635 J3QRK9 145 aa2.64□□□□□ -1.99
UBE2D3-226ENST00000508635 UBE2CO00762 179 aa2.64□□□□□ -1.99
UBE2D3-226ENST00000508635 OVOL1O14753 267 aa2.64□□□□□ -1.99
UBE2D3-226ENST00000508635 RGS5O15539 181 aa2.64□□□□□ -1.99
UBE2D3-226ENST00000508635 NOL3O60936 208 aaKnown RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms