RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 GUCA2BQ16661 112 aa18.23■□□□□ 0.51
SRPK1-210ENST00000508473 GTSCR1Q86UQ5 136 aa18.23■□□□□ 0.51
SRPK1-210ENST00000508473 GPR146Q96CH1 333 aa18.23■□□□□ 0.51
SRPK1-210ENST00000508473 ZNF436Q9C0F3 470 aaPredicted RBP18.23■□□□□ 0.51
SRPK1-210ENST00000508473 PALMDQ9NP74 551 aa18.23■□□□□ 0.51
SRPK1-210ENST00000508473 TECRQ9NZ01 308 aaKnown RBP18.23■□□□□ 0.51
SRPK1-210ENST00000508473 ZNF785A8K8V0 405 aa18.22■□□□□ 0.51
SRPK1-210ENST00000508473 SNCAP37840 140 aa18.22■□□□□ 0.51
SRPK1-210ENST00000508473 SPANXN2Q5MJ10 180 aa18.22■□□□□ 0.51
SRPK1-210ENST00000508473 FAM219AQ8IW50 185 aa18.22■□□□□ 0.51
SRPK1-210ENST00000508473 ENY2Q9NPA8 101 aa18.22■□□□□ 0.51
SRPK1-210ENST00000508473 MLXQ9UH92 298 aa18.22■□□□□ 0.51
SRPK1-210ENST00000508473 KCNIP3Q9Y2W7 256 aa18.22■□□□□ 0.51
SRPK1-210ENST00000508473 ADMP35318 185 aa18.21■□□□□ 0.51
SRPK1-210ENST00000508473 TMEM187Q14656 261 aa18.21■□□□□ 0.51
SRPK1-210ENST00000508473 SPSB3Q6PJ21 355 aa18.21■□□□□ 0.51
SRPK1-210ENST00000508473 WDR89Q96FK6 387 aaPredicted RBP18.21■□□□□ 0.51
SRPK1-210ENST00000508473 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.21■□□□□ 0.51
SRPK1-210ENST00000508473 CACNG5Q9UF02 275 aa18.21■□□□□ 0.51
SRPK1-210ENST00000508473 UFC1Q9Y3C8 167 aa18.21■□□□□ 0.51
SRPK1-210ENST00000508473 TMEM56-RWDD3S4R434 201 aa18.21■□□□□ 0.51
SRPK1-210ENST00000508473 U3KQK5 164 aa18.21■□□□□ 0.51
SRPK1-210ENST00000508473 IGHV3OR16-8A0A075B7F1 116 aa18.2■□□□□ 0.5
SRPK1-210ENST00000508473 MFAP4P55083 255 aa18.2■□□□□ 0.5
SRPK1-210ENST00000508473 ZNF57Q68EA5 555 aaPredicted RBP18.2■□□□□ 0.5
SRPK1-210ENST00000508473 BTNL8Q6UX41 500 aa18.2■□□□□ 0.5
SRPK1-210ENST00000508473 TMED4Q7Z7H5 227 aa18.2■□□□□ 0.5
SRPK1-210ENST00000508473 TMEM190Q8WZ59 177 aa18.2■□□□□ 0.5
SRPK1-210ENST00000508473 GALNT14Q96FL9 552 aa18.2■□□□□ 0.5
SRPK1-210ENST00000508473 ATP6V0BQ99437 205 aa18.2■□□□□ 0.5
SRPK1-210ENST00000508473 C20orf24Q9BUV8 137 aa18.2■□□□□ 0.5
SRPK1-210ENST00000508473 SRRQ9GZT4 340 aa18.2■□□□□ 0.5
SRPK1-210ENST00000508473 INS-IGF2F8WCM5 200 aa18.19■□□□□ 0.5
SRPK1-210ENST00000508473 CTSGP08311 255 aa18.19■□□□□ 0.5
SRPK1-210ENST00000508473 RNASE2P10153 161 aaKnown RBP18.19■□□□□ 0.5
SRPK1-210ENST00000508473 CD81P60033 236 aa18.19■□□□□ 0.5
SRPK1-210ENST00000508473 SUPT4H1P63272 117 aaKnown RBP18.19■□□□□ 0.5
SRPK1-210ENST00000508473 TMEM61Q8N0U2 210 aa18.19■□□□□ 0.5
SRPK1-210ENST00000508473 C19orf73Q9NVV2 129 aa18.19■□□□□ 0.5
SRPK1-210ENST00000508473 NDUFA4O00483 81 aa18.18■□□□□ 0.5
SRPK1-210ENST00000508473 NXPH3O95157 252 aa18.18■□□□□ 0.5
SRPK1-210ENST00000508473 CD7P09564 240 aa18.18■□□□□ 0.5
SRPK1-210ENST00000508473 SPCS3P61009 180 aa18.18■□□□□ 0.5
SRPK1-210ENST00000508473 COL7A1Q02388 2944 aa18.17■□□□□ 0.5
SRPK1-210ENST00000508473 NUPL2O15504 423 aaKnown RBP18.17■□□□□ 0.5
SRPK1-210ENST00000508473 ZNF207O43670 478 aaKnown RBP18.17■□□□□ 0.5
SRPK1-210ENST00000508473 SCAF4O95104 1147 aaKnown RBP18.17■□□□□ 0.5
SRPK1-210ENST00000508473 C8orf88P0DMB2 117 aa18.17■□□□□ 0.5
SRPK1-210ENST00000508473 SUB1P53999 127 aaKnown RBP eCLIP18.17■□□□□ 0.5
SRPK1-210ENST00000508473 ELLP55199 621 aaPredicted RBP18.17■□□□□ 0.5
SRPK1-210ENST00000508473 IL22RA2Q969J5 263 aa18.17■□□□□ 0.5
SRPK1-210ENST00000508473 MARC2Q969Z3 335 aa18.17■□□□□ 0.5
SRPK1-210ENST00000508473 NEURL2Q9BR09 285 aa18.17■□□□□ 0.5
SRPK1-210ENST00000508473 TUBA4BQ9H853 241 aa18.17■□□□□ 0.5
SRPK1-210ENST00000508473 GAR1Q9NY12 217 aaKnown RBP18.17■□□□□ 0.5
SRPK1-210ENST00000508473 MRPL27Q9P0M9 148 aaKnown RBP18.17■□□□□ 0.5
SRPK1-210ENST00000508473 A8MZ25 164 aa18.16■□□□□ 0.5
SRPK1-210ENST00000508473 AARDQ4LEZ3 155 aa18.16■□□□□ 0.5
SRPK1-210ENST00000508473 LYZL2Q7Z4W2 148 aa18.16■□□□□ 0.5
SRPK1-210ENST00000508473 OR52E5Q8NH55 327 aa18.16■□□□□ 0.5
SRPK1-210ENST00000508473 TXN2Q99757 166 aa18.16■□□□□ 0.5
SRPK1-210ENST00000508473 CEBPZOSA8MTT3 80 aa18.15■□□□□ 0.5
SRPK1-210ENST00000508473 GNG7O60262 68 aa18.15■□□□□ 0.5
SRPK1-210ENST00000508473 YIF1AO95070 293 aa18.15■□□□□ 0.5
SRPK1-210ENST00000508473 ANXA3P12429 323 aa18.15■□□□□ 0.5
SRPK1-210ENST00000508473 FCGR2BP31994 310 aaPredicted RBP18.15■□□□□ 0.5
SRPK1-210ENST00000508473 INPP1P49441 399 aa18.15■□□□□ 0.5
SRPK1-210ENST00000508473 BAK1Q16611 211 aa18.15■□□□□ 0.5
SRPK1-210ENST00000508473 ZNF414Q96IQ9 312 aa18.15■□□□□ 0.5
SRPK1-210ENST00000508473 DAZ1Q9NQZ3 744 aaKnown RBP18.15■□□□□ 0.5
SRPK1-210ENST00000508473 HUWE1Q7Z6Z7 4374 aaKnown RBP18.15■□□□□ 0.5
SRPK1-210ENST00000508473 SULT1A3P0DMM9 295 aa18.14■□□□□ 0.49
SRPK1-210ENST00000508473 SULT1A4P0DMN0 295 aa18.14■□□□□ 0.49
SRPK1-210ENST00000508473 RELQ04864 619 aaPredicted RBP18.14■□□□□ 0.49
SRPK1-210ENST00000508473 TRIQKQ629K1 86 aa18.14■□□□□ 0.49
SRPK1-210ENST00000508473 PVRIGQ6DKI7 326 aa18.14■□□□□ 0.49
SRPK1-210ENST00000508473 LGI3Q8N145 548 aa18.14■□□□□ 0.49
SRPK1-210ENST00000508473 DUSP18Q8NEJ0 188 aa18.14■□□□□ 0.49
SRPK1-210ENST00000508473 WWC2-AS2Q96NR7 200 aa18.14■□□□□ 0.49
SRPK1-210ENST00000508473 WFDC10AQ9H1F0 79 aa18.14■□□□□ 0.49
SRPK1-210ENST00000508473 HEYLQ9NQ87 328 aaPredicted RBP18.14■□□□□ 0.49
SRPK1-210ENST00000508473 NDUFA13Q9P0J0 144 aa18.14■□□□□ 0.49
SRPK1-210ENST00000508473 A0A0B4J2A0 478 aa18.13■□□□□ 0.49
SRPK1-210ENST00000508473 LINC00854A0A1B0GVQ3 168 aa18.13■□□□□ 0.49
SRPK1-210ENST00000508473 MLANAQ16655 118 aa18.13■□□□□ 0.49
SRPK1-210ENST00000508473 RBPMS2Q6ZRY4 209 aaKnown RBP18.13■□□□□ 0.49
SRPK1-210ENST00000508473 DEFB125Q8N687 156 aa18.13■□□□□ 0.49
SRPK1-210ENST00000508473 DEDD2Q8WXF8 326 aa18.13■□□□□ 0.49
SRPK1-210ENST00000508473 SLC25A21Q9BQT8 299 aaPredicted RBP18.13■□□□□ 0.49
SRPK1-210ENST00000508473 SHPKQ9UHJ6 478 aa18.13■□□□□ 0.49
SRPK1-210ENST00000508473 CORTO00230 105 aa18.12■□□□□ 0.49
SRPK1-210ENST00000508473 VAMP1P23763 118 aa18.12■□□□□ 0.49
SRPK1-210ENST00000508473 OPRK1P41145 380 aa18.12■□□□□ 0.49
SRPK1-210ENST00000508473 NPBWR1P48145 328 aa18.12■□□□□ 0.49
SRPK1-210ENST00000508473 BSXQ3C1V8 233 aa18.12■□□□□ 0.49
SRPK1-210ENST00000508473 TMEM128Q5BJH2 165 aa18.12■□□□□ 0.49
SRPK1-210ENST00000508473 NMSQ5H8A3 153 aa18.12■□□□□ 0.49
SRPK1-210ENST00000508473 RCHY1Q96PM5 261 aa18.12■□□□□ 0.49
SRPK1-210ENST00000508473 SDHCQ99643 169 aaPredicted RBP18.12■□□□□ 0.49
SRPK1-210ENST00000508473 FNDC4Q9H6D8 234 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms