RNA–Protein interactions for RNA: ENST00000507638.1

VEGFC-201, Transcript of vascular endothelial growth factor C, humanhuman

TSL 3

Gene VEGFC, Length 759 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-201ENST00000507638 ZNF799Q96GE5 643 aa4.58□□□□□ -1.68
VEGFC-201ENST00000507638 CIB3Q96Q77 187 aaPredicted RBP4.58□□□□□ -1.68
VEGFC-201ENST00000507638 TP53RKQ96S44 253 aa4.58□□□□□ -1.68
VEGFC-201ENST00000507638 VAMP8Q9BV40 100 aa4.58□□□□□ -1.68
VEGFC-201ENST00000507638 WDR61Q9GZS3 305 aaKnown RBP4.58□□□□□ -1.68
VEGFC-201ENST00000507638 RBKSQ9H477 322 aa4.58□□□□□ -1.68
VEGFC-201ENST00000507638 PNRC2Q9NPJ4 139 aaKnown RBP4.58□□□□□ -1.68
VEGFC-201ENST00000507638 RPRMQ9NS64 109 aa4.58□□□□□ -1.68
VEGFC-201ENST00000507638 TMEM106BQ9NUM4 274 aa4.58□□□□□ -1.68
VEGFC-201ENST00000507638 PSENENQ9NZ42 101 aa4.58□□□□□ -1.68
VEGFC-201ENST00000507638 ST3GAL6Q9Y274 331 aa4.58□□□□□ -1.68
VEGFC-201ENST00000507638 WIPI2Q9Y4P8 454 aa4.58□□□□□ -1.68
VEGFC-201ENST00000507638 STARD9Q9P2P6 4700 aa4.58□□□□□ -1.68
VEGFC-201ENST00000507638 IGKV1D-8A0A087WSZ0 117 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 TRBV6-6A0A0A6YYG2 114 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 IGKV1D-43A0A0B4J1Z2 117 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 A0A0U1RQK1 487 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 ZNF816-ZNF321PA0A0X1KG74 233 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 MDFIC2A0A1B0GVS7 189 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 ZNF320A2RRD8 509 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 RER1O15258 196 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 TRAF3IP2O43734 574 aaPredicted RBP4.57□□□□□ -1.68
VEGFC-201ENST00000507638 MT-CO2P00403 227 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 GYPAP02724 150 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 MT-ND6P03923 174 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 SNRPCP09234 159 aaKnown RBP4.57□□□□□ -1.68
VEGFC-201ENST00000507638 F2RP25116 425 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 SUMO2P61956 95 aaKnown RBP4.57□□□□□ -1.68
VEGFC-201ENST00000507638 SELENOTP62341 195 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 Q0VG73 95 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 ZNF154Q13106 437 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 PLPPR5Q32ZL2 321 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 CXorf66Q5JRM2 361 aaPredicted RBP4.57□□□□□ -1.68
VEGFC-201ENST00000507638 FAM27BQ5VT28 67 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 LEMD1Q68G75 181 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 TMEM42Q69YG0 159 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 WDR73Q6P4I2 378 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 LCN15Q6UWW0 184 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 TEX43Q6ZNM6 134 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 ZNF788Q6ZQV5 615 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 SMIM15Q7Z3B0 74 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 NUFIP2Q7Z417 695 aaKnown RBP4.57□□□□□ -1.68
VEGFC-201ENST00000507638 C5orf24Q7Z6I8 188 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 TMEM217Q8N7C4 229 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 ZNF321PQ8N8H1 164 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 OR5AU1Q8NGC0 362 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 OR10G3Q8NGC4 313 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 OR5B3Q8NH48 314 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 MRPL30Q8TCC3 161 aaKnown RBP4.57□□□□□ -1.68
VEGFC-201ENST00000507638 NEK7Q8TDX7 302 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 DTD1Q8TEA8 209 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 CORO2AQ92828 525 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 REEP6Q96HR9 211 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 RNF2Q99496 336 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 PCGF1Q9BSM1 259 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 ABHD14AQ9BUJ0 271 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 EMC6Q9BV81 110 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 SF3B5Q9BWJ5 86 aaKnown RBP4.57□□□□□ -1.68
VEGFC-201ENST00000507638 OR2J1Q9GZK6 312 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 GLRX2Q9NS18 164 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 KCNIP2Q9NS61 270 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 LIN7CQ9NUP9 197 aaKnown RBP4.57□□□□□ -1.68
VEGFC-201ENST00000507638 ZNF586Q9NXT0 402 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 PLEK2Q9NYT0 353 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 C1RLQ9NZP8 487 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 KLRF1Q9NZS2 232 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 UQCR10Q9UDW1 63 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 FUT9Q9Y231 359 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 MRPS18CQ9Y3D5 142 aaKnown RBP4.57□□□□□ -1.68
VEGFC-201ENST00000507638 CHCHD2Q9Y6H1 151 aaPredicted RBP4.57□□□□□ -1.68
VEGFC-201ENST00000507638 PXMP4Q9Y6I8 212 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 LY96Q9Y6Y9 160 aa4.57□□□□□ -1.68
VEGFC-201ENST00000507638 A0A1W2PN81 502 aa4.56□□□□□ -1.68
VEGFC-201ENST00000507638 LINC01548A6NM66 108 aa4.56□□□□□ -1.68
VEGFC-201ENST00000507638 MPDU1O75352 247 aa4.56□□□□□ -1.68
VEGFC-201ENST00000507638 RBMXL2O75526 392 aaKnown RBP4.56□□□□□ -1.68
VEGFC-201ENST00000507638 PGLYRP1O75594 196 aaPredicted RBP4.56□□□□□ -1.68
VEGFC-201ENST00000507638 CBR3O75828 277 aa4.56□□□□□ -1.68
VEGFC-201ENST00000507638 MMP7P09237 267 aaPredicted RBP4.56□□□□□ -1.68
VEGFC-201ENST00000507638 KITLGP21583 273 aa4.56□□□□□ -1.68
VEGFC-201ENST00000507638 BRS3P32247 399 aa4.56□□□□□ -1.68
VEGFC-201ENST00000507638 CHRNA7P36544 502 aa4.56□□□□□ -1.68
VEGFC-201ENST00000507638 LHX2P50458 406 aa4.56□□□□□ -1.68
VEGFC-201ENST00000507638 PAX9P55771 341 aa4.56□□□□□ -1.68
VEGFC-201ENST00000507638 CLDN17P56750 224 aa4.56□□□□□ -1.68
VEGFC-201ENST00000507638 CLDN18P56856 261 aa4.56□□□□□ -1.68
VEGFC-201ENST00000507638 RBM11P57052 281 aaKnown RBP4.56□□□□□ -1.68
VEGFC-201ENST00000507638 ERVS71-1P61550 626 aa4.56□□□□□ -1.68
VEGFC-201ENST00000507638 HOXA4Q00056 320 aaPredicted RBP4.56□□□□□ -1.68
VEGFC-201ENST00000507638 PMCHL1Q16048 86 aa4.56□□□□□ -1.68
VEGFC-201ENST00000507638 OTPQ5XKR4 325 aa4.56□□□□□ -1.68
VEGFC-201ENST00000507638 C19orf35Q6ZS72 473 aa4.56□□□□□ -1.68
VEGFC-201ENST00000507638 MOB1BQ7L9L4 216 aa4.56□□□□□ -1.68
VEGFC-201ENST00000507638 PNKDQ8N490 385 aa4.56□□□□□ -1.68
VEGFC-201ENST00000507638 OR1F12Q8NHA8 337 aa4.56□□□□□ -1.68
VEGFC-201ENST00000507638 LINC01006Q8NI28 216 aa4.56□□□□□ -1.68
VEGFC-201ENST00000507638 RNF138Q8WVD3 245 aa4.56□□□□□ -1.68
VEGFC-201ENST00000507638 OR5P3Q8WZ94 311 aa4.56□□□□□ -1.68
VEGFC-201ENST00000507638 RAB1CQ92928 201 aa4.56□□□□□ -1.68
VEGFC-201ENST00000507638 SPACA9Q96E40 222 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms