RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 CACFD1Q9UGQ2 172 aa10.75□□□□□ -0.69
HMGCS1-203ENST00000507004 TRAV14DV4A0A0A6YYC5 116 aa10.74□□□□□ -0.69
HMGCS1-203ENST00000507004 IGHV3-21A0A0B4J1V1 117 aa10.74□□□□□ -0.69
HMGCS1-203ENST00000507004 IGHV7-4-1A0A0J9YVY3 117 aa10.74□□□□□ -0.69
HMGCS1-203ENST00000507004 C3orf85A0A1B0GTC6 90 aa10.74□□□□□ -0.69
HMGCS1-203ENST00000507004 DBX1A6NMT0 343 aa10.74□□□□□ -0.69
HMGCS1-203ENST00000507004 M0QYG6 137 aa10.74□□□□□ -0.69
HMGCS1-203ENST00000507004 YIF1AO95070 293 aa10.74□□□□□ -0.69
HMGCS1-203ENST00000507004 MT-CO2P00403 227 aa10.74□□□□□ -0.69
HMGCS1-203ENST00000507004 IGKV1-39P01597 117 aa10.74□□□□□ -0.69
HMGCS1-203ENST00000507004 IGKV1D-39P04432 117 aa10.74□□□□□ -0.69
HMGCS1-203ENST00000507004 MEF2DQ14814 521 aa10.74□□□□□ -0.69
HMGCS1-203ENST00000507004 CTF1Q16619 201 aa10.74□□□□□ -0.69
HMGCS1-203ENST00000507004 GPR107Q5VW38 600 aa10.74□□□□□ -0.69
HMGCS1-203ENST00000507004 FAM219AQ8IW50 185 aa10.74□□□□□ -0.69
HMGCS1-203ENST00000507004 TMEM231Q9H6L2 316 aa10.74□□□□□ -0.69
HMGCS1-203ENST00000507004 ENY2Q9NPA8 101 aa10.74□□□□□ -0.69
HMGCS1-203ENST00000507004 KLK11Q9UBX7 282 aa10.74□□□□□ -0.69
HMGCS1-203ENST00000507004 DYNC2H1Q8NCM8 4307 aaKnown RBP10.74□□□□□ -0.69
HMGCS1-203ENST00000507004 TENM2Q9NT68 2774 aa10.73□□□□□ -0.69
HMGCS1-203ENST00000507004 GABARAPH6UMI1 98 aa10.73□□□□□ -0.69
HMGCS1-203ENST00000507004 SPRY2O43597 315 aa10.73□□□□□ -0.69
HMGCS1-203ENST00000507004 IFNA17P01571 189 aa10.73□□□□□ -0.69
HMGCS1-203ENST00000507004 CD74P04233 296 aa10.73□□□□□ -0.69
HMGCS1-203ENST00000507004 CD3DP04234 171 aa10.73□□□□□ -0.69
HMGCS1-203ENST00000507004 CTSDP07339 412 aaPredicted RBP10.73□□□□□ -0.69
HMGCS1-203ENST00000507004 SURF2Q15527 256 aaPredicted RBP10.73□□□□□ -0.69
HMGCS1-203ENST00000507004 TRIM16LQ309B1 348 aa10.73□□□□□ -0.69
HMGCS1-203ENST00000507004 OR52I2Q8NH67 350 aa10.73□□□□□ -0.69
HMGCS1-203ENST00000507004 RHPN1-AS1Q9BWJ2 59 aa10.73□□□□□ -0.69
HMGCS1-203ENST00000507004 TRAV2A0A0B4J234 112 aa10.72□□□□□ -0.69
HMGCS1-203ENST00000507004 CHEK1O14757 476 aa10.72□□□□□ -0.69
HMGCS1-203ENST00000507004 RAB3DO95716 219 aa10.72□□□□□ -0.69
HMGCS1-203ENST00000507004 UCP1P25874 307 aa10.72□□□□□ -0.69
HMGCS1-203ENST00000507004 TNFRSF9Q07011 255 aa10.72□□□□□ -0.69
HMGCS1-203ENST00000507004 ODF3L2Q3SX64 289 aa10.72□□□□□ -0.69
HMGCS1-203ENST00000507004 ZNF600Q6ZNG1 722 aa10.72□□□□□ -0.69
HMGCS1-203ENST00000507004 GPR141Q7Z602 305 aa10.72□□□□□ -0.69
HMGCS1-203ENST00000507004 RNASE11Q8TAA1 199 aaKnown RBP10.72□□□□□ -0.69
HMGCS1-203ENST00000507004 PINX1Q96BK5 328 aaKnown RBP10.72□□□□□ -0.69
HMGCS1-203ENST00000507004 MRPS26Q9BYN8 205 aaKnown RBP10.72□□□□□ -0.69
HMGCS1-203ENST00000507004 C14orf166Q9Y224 244 aaKnown RBP10.72□□□□□ -0.69
HMGCS1-203ENST00000507004 SELENOKQ9Y6D0 94 aa10.72□□□□□ -0.69
HMGCS1-203ENST00000507004 A0A1W2PS18 150 aa10.71□□□□□ -0.69
HMGCS1-203ENST00000507004 NUPR2A6NF83 97 aa10.71□□□□□ -0.69
HMGCS1-203ENST00000507004 DFFBO76075 338 aa10.71□□□□□ -0.69
HMGCS1-203ENST00000507004 P0C879 139 aa10.71□□□□□ -0.69
HMGCS1-203ENST00000507004 RPL5P46777 297 aaKnown RBP10.71□□□□□ -0.69
HMGCS1-203ENST00000507004 PVRIGQ6DKI7 326 aa10.71□□□□□ -0.69
HMGCS1-203ENST00000507004 STEAP1BQ6NZ63 245 aa10.71□□□□□ -0.69
HMGCS1-203ENST00000507004 OR52E5Q8NH55 327 aa10.71□□□□□ -0.69
HMGCS1-203ENST00000507004 TP53RKQ96S44 253 aa10.71□□□□□ -0.69
HMGCS1-203ENST00000507004 ABHD1Q96SE0 405 aa10.71□□□□□ -0.69
HMGCS1-203ENST00000507004 RNF2Q99496 336 aa10.71□□□□□ -0.69
HMGCS1-203ENST00000507004 BCL7BQ9BQE9 202 aa10.71□□□□□ -0.69
HMGCS1-203ENST00000507004 UBQLN2Q9UHD9 624 aa10.71□□□□□ -0.69
HMGCS1-203ENST00000507004 TRAV30A0A087WSZ9 112 aa10.7□□□□□ -0.7
HMGCS1-203ENST00000507004 PIGBOS1A0A0B4J2F0 54 aa10.7□□□□□ -0.7
HMGCS1-203ENST00000507004 RPS10-NUDT3A0A1W2PQS6 291 aa10.7□□□□□ -0.7
HMGCS1-203ENST00000507004 DISC1C4P0D8 188 aa10.7□□□□□ -0.7
HMGCS1-203ENST00000507004 RGS5O15539 181 aa10.7□□□□□ -0.7
HMGCS1-203ENST00000507004 ST8SIA3O43173 380 aa10.7□□□□□ -0.7
HMGCS1-203ENST00000507004 IGKV1-5P01602 117 aa10.7□□□□□ -0.7
HMGCS1-203ENST00000507004 SMIM18P0DKX4 95 aa10.7□□□□□ -0.7
HMGCS1-203ENST00000507004 HOXA1P49639 335 aaPredicted RBP10.7□□□□□ -0.7
HMGCS1-203ENST00000507004 PPP5CP53041 499 aa10.7□□□□□ -0.7
HMGCS1-203ENST00000507004 DHODHQ02127 395 aa10.7□□□□□ -0.7
HMGCS1-203ENST00000507004 SCGB2B2Q4G0G5 96 aa10.7□□□□□ -0.7
HMGCS1-203ENST00000507004 GATAD1Q8WUU5 269 aa10.7□□□□□ -0.7
HMGCS1-203ENST00000507004 RNF183Q96D59 192 aa10.7□□□□□ -0.7
HMGCS1-203ENST00000507004 NARS2Q96I59 477 aaKnown RBP10.7□□□□□ -0.7
HMGCS1-203ENST00000507004 MAP6D1Q9H9H5 199 aa10.7□□□□□ -0.7
HMGCS1-203ENST00000507004 SACSQ9NZJ4 4579 aa10.69□□□□□ -0.7
HMGCS1-203ENST00000507004 RYR2Q92736 4967 aa10.69□□□□□ -0.7
HMGCS1-203ENST00000507004 A0A0B4J293 547 aa10.69□□□□□ -0.7
HMGCS1-203ENST00000507004 CTDSPLO15194 276 aa10.69□□□□□ -0.7
HMGCS1-203ENST00000507004 ZNF207O43670 478 aaKnown RBP10.69□□□□□ -0.7
HMGCS1-203ENST00000507004 PI3P19957 117 aa10.69□□□□□ -0.7
HMGCS1-203ENST00000507004 SPCS3P61009 180 aa10.69□□□□□ -0.7
HMGCS1-203ENST00000507004 AARDQ4LEZ3 155 aa10.69□□□□□ -0.7
HMGCS1-203ENST00000507004 RNASE12Q5GAN4 147 aaKnown RBP10.69□□□□□ -0.7
HMGCS1-203ENST00000507004 FAM90A2PQ658T7 463 aa10.69□□□□□ -0.7
HMGCS1-203ENST00000507004 TOMM20LQ6UXN7 152 aa10.69□□□□□ -0.7
HMGCS1-203ENST00000507004 NOXA1Q86UR1 476 aa10.69□□□□□ -0.7
HMGCS1-203ENST00000507004 OR13C8Q8NGS7 320 aa10.69□□□□□ -0.7
HMGCS1-203ENST00000507004 SCGB3A2Q96PL1 93 aa10.69□□□□□ -0.7
HMGCS1-203ENST00000507004 PRRT1Q99946 306 aa10.69□□□□□ -0.7
HMGCS1-203ENST00000507004 NAA50Q9GZZ1 169 aaKnown RBP10.69□□□□□ -0.7
HMGCS1-203ENST00000507004 VSIRQ9H7M9 311 aa10.69□□□□□ -0.7
HMGCS1-203ENST00000507004 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.69□□□□□ -0.7
HMGCS1-203ENST00000507004 STARD9Q9P2P6 4700 aa10.68□□□□□ -0.7
HMGCS1-203ENST00000507004 IGHV3OR16-8A0A075B7F1 116 aa10.68□□□□□ -0.7
HMGCS1-203ENST00000507004 TEX13DA0A0J9YY54 714 aaPredicted RBP10.68□□□□□ -0.7
HMGCS1-203ENST00000507004 MPTX1A8MV57 137 aa10.68□□□□□ -0.7
HMGCS1-203ENST00000507004 CLN5O75503 358 aa10.68□□□□□ -0.7
HMGCS1-203ENST00000507004 CDS2O95674 445 aa10.68□□□□□ -0.7
HMGCS1-203ENST00000507004 TMEM50AO95807 157 aa10.68□□□□□ -0.7
HMGCS1-203ENST00000507004 RNASE2P10153 161 aaKnown RBP10.68□□□□□ -0.7
HMGCS1-203ENST00000507004 HTR2BP41595 481 aa10.68□□□□□ -0.7
HMGCS1-203ENST00000507004 DEFB135Q30KP9 77 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms