RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 ANGP03950 147 aaKnown RBP4.35□□□□□ -1.71
MATR3-211ENST00000505625 UMODP07911 640 aa4.35□□□□□ -1.71
MATR3-211ENST00000505625 STAG3L2P0CL84 134 aa4.35□□□□□ -1.71
MATR3-211ENST00000505625 RUNX1Q01196 453 aa4.35□□□□□ -1.71
MATR3-211ENST00000505625 C9orf66Q5T8R8 295 aa4.35□□□□□ -1.71
MATR3-211ENST00000505625 CADM3Q8N126 398 aa4.35□□□□□ -1.71
MATR3-211ENST00000505625 C10orf126Q8N4M7 172 aa4.35□□□□□ -1.71
MATR3-211ENST00000505625 OR4D11Q8NGI4 311 aa4.35□□□□□ -1.71
MATR3-211ENST00000505625 SLC25A15Q9Y619 301 aa4.35□□□□□ -1.71
MATR3-211ENST00000505625 ZSWIM8A7E2V4 1837 aa4.35□□□□□ -1.71
MATR3-211ENST00000505625 TRAV2A0A0B4J234 112 aa4.35□□□□□ -1.71
MATR3-211ENST00000505625 TRAV13-1A0A0B4J241 112 aa4.35□□□□□ -1.71
MATR3-211ENST00000505625 CHKB-CPT1BH3BT56 60 aa4.35□□□□□ -1.71
MATR3-211ENST00000505625 TNFSF13O75888 250 aa4.35□□□□□ -1.71
MATR3-211ENST00000505625 GP2P55259 537 aaKnown RBP4.35□□□□□ -1.71
MATR3-211ENST00000505625 DEFB131AP59861 70 aa4.35□□□□□ -1.71
MATR3-211ENST00000505625 HIST1H4AP62805 103 aaKnown RBP4.35□□□□□ -1.71
MATR3-211ENST00000505625 COTL1Q14019 142 aa4.35□□□□□ -1.71
MATR3-211ENST00000505625 TMEM187Q14656 261 aa4.35□□□□□ -1.71
MATR3-211ENST00000505625 DEFB136Q30KP8 78 aa4.35□□□□□ -1.71
MATR3-211ENST00000505625 MRM1Q6IN84 353 aaKnown RBP4.35□□□□□ -1.71
MATR3-211ENST00000505625 OR10G8Q8NGN5 311 aa4.35□□□□□ -1.71
MATR3-211ENST00000505625 WDR90Q96KV7 1748 aa4.35□□□□□ -1.71
MATR3-211ENST00000505625 CA7P43166 264 aa4.35□□□□□ -1.71
MATR3-211ENST00000505625 CLEC18BQ6UXF7 455 aa4.35□□□□□ -1.71
MATR3-211ENST00000505625 FAM19A2Q8N3H0 131 aa4.35□□□□□ -1.71
MATR3-211ENST00000505625 TMEM229BQ8NBD8 167 aa4.35□□□□□ -1.71
MATR3-211ENST00000505625 TSSC4Q9Y5U2 329 aaPredicted RBP4.35□□□□□ -1.71
MATR3-211ENST00000505625 DOCK10Q96BY6 2186 aa4.35□□□□□ -1.71
MATR3-211ENST00000505625 TRGV11A0A075B6L2 103 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 KCNE1BA0A087WTH5 132 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 K7ENP7 123 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 P2RY4P51582 365 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 RNF144BQ7Z419 303 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 LYPD6BQ8NI32 183 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 WDYHV1Q96HA8 205 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 SMIM2Q9BVW6 85 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 RCC2Q9P258 522 aaKnown RBP4.34□□□□□ -1.71
MATR3-211ENST00000505625 KIAA1551Q9HCM1 1747 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 A0A0B4J2E0 115 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 A0A1B0GX12 115 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 GAGE12JA6NER3 117 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 IFITM5A6NNB3 132 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 MESP2Q0VG99 397 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 GAGE1Q13065 139 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 GAGE4Q13068 117 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 GAGE5Q13069 117 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 ELOBQ15370 118 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 GAGE13Q4V321 117 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 PRSS33Q8NF86 280 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 UQCC2Q9BRT2 126 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 SLC25A2Q9BXI2 301 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 ST20Q9HBF5 79 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 CACNA1BQ00975 2339 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 RBFOX3A6NFN3 312 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 ARL14EPLP0DKL9 152 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 COL8A2P25067 703 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 GCAP28676 217 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 FABP5Q01469 135 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 PAX2Q02962 417 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 GAGE6Q13070 117 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 TMEM249Q2WGJ8 235 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 MIC13Q5XKP0 118 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 DIDO1Q9BTC0 2240 aaKnown RBP4.34□□□□□ -1.71
MATR3-211ENST00000505625 ZNF253O75346 499 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 PEX11BO96011 259 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 SFTA3P0C7M3 94 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 AZU1P20160 251 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 FAM120AOSQ5T036 256 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 RIPPLY2Q5TAB7 128 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 NRG4Q8WWG1 115 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 OR5P3Q8WZ94 311 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 SLC50A1Q9BRV3 221 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 C1orf43Q9BWL3 253 aa4.34□□□□□ -1.71
MATR3-211ENST00000505625 NKX6-2Q9C056 277 aaPredicted RBP4.34□□□□□ -1.71
MATR3-211ENST00000505625 SLC17A3O00476 420 aa4.34□□□□□ -1.72
MATR3-211ENST00000505625 PPYP01298 95 aa4.34□□□□□ -1.72
MATR3-211ENST00000505625 CDKN1BP46527 198 aa4.34□□□□□ -1.72
MATR3-211ENST00000505625 LSM6P62312 80 aaKnown RBP4.34□□□□□ -1.72
MATR3-211ENST00000505625 C9orf170A2RU37 121 aa4.34□□□□□ -1.72
MATR3-211ENST00000505625 F6UB75 175 aa4.34□□□□□ -1.72
MATR3-211ENST00000505625 CCL24O00175 119 aa4.34□□□□□ -1.72
MATR3-211ENST00000505625 MLNRO43193 412 aa4.34□□□□□ -1.72
MATR3-211ENST00000505625 CD37P11049 281 aa4.34□□□□□ -1.72
MATR3-211ENST00000505625 HOXA5P20719 270 aa4.34□□□□□ -1.72
MATR3-211ENST00000505625 CDK5R1Q15078 307 aa4.34□□□□□ -1.72
MATR3-211ENST00000505625 KIAA1644Q3SXP7 199 aa4.34□□□□□ -1.72
MATR3-211ENST00000505625 TMEM45BQ96B21 275 aa4.34□□□□□ -1.72
MATR3-211ENST00000505625 IMMP1LQ96LU5 166 aa4.34□□□□□ -1.72
MATR3-211ENST00000505625 DNAJC4Q9NNZ3 241 aa4.34□□□□□ -1.72
MATR3-211ENST00000505625 PSORS1C1Q9UIG5 152 aa4.34□□□□□ -1.72
MATR3-211ENST00000505625 GREB1LQ9C091 1923 aaPredicted RBP4.33□□□□□ -1.72
MATR3-211ENST00000505625 FAM236DA0A1B0GTK5 79 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 TCRBV16S1A1N1A0A5B0 115 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 C7orf77A4D0Y5 90 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 ZAR1LA6NP61 321 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 KNCNA6PVL3 124 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 FAM236CP0DP71 79 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 GLRXP35754 106 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 IFI27P40305 119 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms