RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 NAP1L6A6NFF2 107 aa7.27□□□□□ -1.25
NEDD9-210ENST00000505589 MFSD2BA6NFX1 497 aa7.27□□□□□ -1.25
NEDD9-210ENST00000505589 PRSS29PA6NIE9 313 aa7.27□□□□□ -1.25
NEDD9-210ENST00000505589 CENPXA8MT69 81 aa7.27□□□□□ -1.25
NEDD9-210ENST00000505589 E7EUB6 86 aa7.27□□□□□ -1.25
NEDD9-210ENST00000505589 HPRT1P00492 218 aa7.27□□□□□ -1.25
NEDD9-210ENST00000505589 CTSDP07339 412 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-210ENST00000505589 AKAIN1P0CW23 69 aa7.27□□□□□ -1.25
NEDD9-210ENST00000505589 AREGP15514 252 aa7.27□□□□□ -1.25
NEDD9-210ENST00000505589 RPA2P15927 270 aa7.27□□□□□ -1.25
NEDD9-210ENST00000505589 NQO2P16083 231 aa7.27□□□□□ -1.25
NEDD9-210ENST00000505589 TBPP20226 339 aa7.27□□□□□ -1.25
NEDD9-210ENST00000505589 FCGR2BP31994 310 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-210ENST00000505589 BTCP35070 178 aa7.27□□□□□ -1.25
NEDD9-210ENST00000505589 FAUP35544 74 aaKnown RBP7.27□□□□□ -1.25
NEDD9-210ENST00000505589 TAS2R31P59538 309 aa7.27□□□□□ -1.25
NEDD9-210ENST00000505589 TAS2R19P59542 299 aa7.27□□□□□ -1.25
NEDD9-210ENST00000505589 PRR20EP86478 221 aa7.27□□□□□ -1.25
NEDD9-210ENST00000505589 PRR20CP86479 221 aa7.27□□□□□ -1.25
NEDD9-210ENST00000505589 PRR20DP86480 221 aa7.27□□□□□ -1.25
NEDD9-210ENST00000505589 PRR20BP86481 221 aa7.27□□□□□ -1.25
NEDD9-210ENST00000505589 PRR20AP86496 221 aa7.27□□□□□ -1.25
NEDD9-210ENST00000505589 SOHLH1Q5JUK2 328 aa7.27□□□□□ -1.25
NEDD9-210ENST00000505589 PVRIGQ6DKI7 326 aa7.27□□□□□ -1.25
NEDD9-210ENST00000505589 TMEM229BQ8NBD8 167 aa7.27□□□□□ -1.25
NEDD9-210ENST00000505589 ENKURQ8TC29 256 aa7.27□□□□□ -1.25
NEDD9-210ENST00000505589 C5orf30Q96GV9 206 aa7.27□□□□□ -1.25
NEDD9-210ENST00000505589 TRAV14DV4A0A0A6YYC5 116 aa7.26□□□□□ -1.25
NEDD9-210ENST00000505589 IGHV3-35A0A0C4DH35 117 aa7.26□□□□□ -1.25
NEDD9-210ENST00000505589 C15orf61A6NNL5 157 aa7.26□□□□□ -1.25
NEDD9-210ENST00000505589 NUPL2O15504 423 aaKnown RBP7.26□□□□□ -1.25
NEDD9-210ENST00000505589 RBFOX2O43251 390 aaKnown RBP eCLIP7.26□□□□□ -1.25
NEDD9-210ENST00000505589 CA1P00915 261 aaPredicted RBP7.26□□□□□ -1.25
NEDD9-210ENST00000505589 TRAPPC2P0DI81 140 aa7.26□□□□□ -1.25
NEDD9-210ENST00000505589 TRAPPC2BP0DI82 140 aa7.26□□□□□ -1.25
NEDD9-210ENST00000505589 MIFP14174 115 aa7.26□□□□□ -1.25
NEDD9-210ENST00000505589 NAT1P18440 290 aa7.26□□□□□ -1.25
NEDD9-210ENST00000505589 NPY1RP25929 384 aa7.26□□□□□ -1.25
NEDD9-210ENST00000505589 RPL30P62888 115 aaKnown RBP7.26□□□□□ -1.25
NEDD9-210ENST00000505589 CATR1Q13166 79 aa7.26□□□□□ -1.25
NEDD9-210ENST00000505589 STEAP1BQ6NZ63 245 aa7.26□□□□□ -1.25
NEDD9-210ENST00000505589 Q6ZNX1 250 aa7.26□□□□□ -1.25
NEDD9-210ENST00000505589 SSX9Q7RTT3 188 aa7.26□□□□□ -1.25
NEDD9-210ENST00000505589 HOGA1Q86XE5 327 aa7.26□□□□□ -1.25
NEDD9-210ENST00000505589 APRG1Q8IVJ8 170 aa7.26□□□□□ -1.25
NEDD9-210ENST00000505589 TMEM116Q8NCL8 245 aa7.26□□□□□ -1.25
NEDD9-210ENST00000505589 DUSP18Q8NEJ0 188 aa7.26□□□□□ -1.25
NEDD9-210ENST00000505589 OR4C16Q8NGL9 310 aa7.26□□□□□ -1.25
NEDD9-210ENST00000505589 RNF126Q9BV68 326 aa7.26□□□□□ -1.25
NEDD9-210ENST00000505589 QTRT1Q9BXR0 403 aaKnown RBP7.26□□□□□ -1.25
NEDD9-210ENST00000505589 FKBP11Q9NYL4 201 aa7.26□□□□□ -1.25
NEDD9-210ENST00000505589 C21orf62Q9NYP8 219 aa7.26□□□□□ -1.25
NEDD9-210ENST00000505589 SMPXQ9UHP9 88 aa7.26□□□□□ -1.25
NEDD9-210ENST00000505589 RYR1P21817 5038 aa7.25□□□□□ -1.25
NEDD9-210ENST00000505589 IGHV7-4-1A0A0J9YVY3 117 aa7.25□□□□□ -1.25
NEDD9-210ENST00000505589 FAM240BA0A1B0GVZ2 78 aa7.25□□□□□ -1.25
NEDD9-210ENST00000505589 OR2T8A6NH00 312 aa7.25□□□□□ -1.25
NEDD9-210ENST00000505589 DNASE2O00115 360 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-210ENST00000505589 CD74P04233 296 aa7.25□□□□□ -1.25
NEDD9-210ENST00000505589 CD3DP04234 171 aa7.25□□□□□ -1.25
NEDD9-210ENST00000505589 REG1AP05451 166 aa7.25□□□□□ -1.25
NEDD9-210ENST00000505589 SERPINE2P07093 398 aa7.25□□□□□ -1.25
NEDD9-210ENST00000505589 NFYAP23511 347 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-210ENST00000505589 TAS2R46P59540 309 aa7.25□□□□□ -1.25
NEDD9-210ENST00000505589 OR2B8PP59922 312 aa7.25□□□□□ -1.25
NEDD9-210ENST00000505589 MEF2DQ14814 521 aa7.25□□□□□ -1.25
NEDD9-210ENST00000505589 LGALS9BQ3B8N2 356 aa7.25□□□□□ -1.25
NEDD9-210ENST00000505589 OR2B11Q5JQS5 317 aa7.25□□□□□ -1.25
NEDD9-210ENST00000505589 STHQ8IWL8 128 aa7.25□□□□□ -1.25
NEDD9-210ENST00000505589 POM121L12Q8N7R1 296 aa7.25□□□□□ -1.25
NEDD9-210ENST00000505589 TMEM56Q96MV1 263 aa7.25□□□□□ -1.25
NEDD9-210ENST00000505589 TXN2Q99757 166 aa7.25□□□□□ -1.25
NEDD9-210ENST00000505589 GINS3Q9BRX5 216 aa7.25□□□□□ -1.25
NEDD9-210ENST00000505589 RHPN1-AS1Q9BWJ2 59 aa7.25□□□□□ -1.25
NEDD9-210ENST00000505589 TMEM231Q9H6L2 316 aa7.25□□□□□ -1.25
NEDD9-210ENST00000505589 COPZ2Q9P299 210 aa7.25□□□□□ -1.25
NEDD9-210ENST00000505589 TRAV2A0A0B4J234 112 aa7.24□□□□□ -1.25
NEDD9-210ENST00000505589 A0A1B0GVG6 124 aa7.24□□□□□ -1.25
NEDD9-210ENST00000505589 A0A1B0GVY2 172 aa7.24□□□□□ -1.25
NEDD9-210ENST00000505589 UPK2O00526 184 aa7.24□□□□□ -1.25
NEDD9-210ENST00000505589 YIF1AO95070 293 aa7.24□□□□□ -1.25
NEDD9-210ENST00000505589 RAB3DO95716 219 aa7.24□□□□□ -1.25
NEDD9-210ENST00000505589 IFNA21P01568 189 aa7.24□□□□□ -1.25
NEDD9-210ENST00000505589 IFNA17P01571 189 aa7.24□□□□□ -1.25
NEDD9-210ENST00000505589 FCER2P06734 321 aa7.24□□□□□ -1.25
NEDD9-210ENST00000505589 OR13C7P0DN81 318 aa7.24□□□□□ -1.25
NEDD9-210ENST00000505589 HLA-DMAP28067 261 aa7.24□□□□□ -1.25
NEDD9-210ENST00000505589 ERVK-16P61578 105 aa7.24□□□□□ -1.25
NEDD9-210ENST00000505589 POU2AF1Q16633 256 aa7.24□□□□□ -1.25
NEDD9-210ENST00000505589 Q56UQ5 140 aa7.24□□□□□ -1.25
NEDD9-210ENST00000505589 RNASE10Q5GAN6 216 aaKnown RBP7.24□□□□□ -1.25
NEDD9-210ENST00000505589 FAAP20Q6NZ36 180 aa7.24□□□□□ -1.25
NEDD9-210ENST00000505589 MORN3Q6PF18 240 aaPredicted RBP7.24□□□□□ -1.25
NEDD9-210ENST00000505589 SPAG16Q8N0X2 631 aa7.24□□□□□ -1.25
NEDD9-210ENST00000505589 CADM3Q8N126 398 aa7.24□□□□□ -1.25
NEDD9-210ENST00000505589 BEST4Q8NFU0 473 aa7.24□□□□□ -1.25
NEDD9-210ENST00000505589 DMBX1Q8NFW5 382 aa7.24□□□□□ -1.25
NEDD9-210ENST00000505589 OR4D10Q8NGI6 311 aa7.24□□□□□ -1.25
NEDD9-210ENST00000505589 OR1L8Q8NGR8 309 aa7.24□□□□□ -1.25
NEDD9-210ENST00000505589 MAFIPQ8WZ33 124 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms