RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 MRPL36Q9P0J6 103 aaKnown RBP6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 DYNC2H1Q8NCM8 4307 aaKnown RBP6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 AKR1C2P52895 323 aa6.35□□□□□ -1.39
CDC42SE2-208ENST00000505065 PRSS54Q6PEW0 395 aa6.35□□□□□ -1.39
CDC42SE2-208ENST00000505065 C19orf35Q6ZS72 473 aa6.35□□□□□ -1.39
CDC42SE2-208ENST00000505065 SLC24A4Q8NFF2 622 aa6.35□□□□□ -1.39
CDC42SE2-208ENST00000505065 CXorf58Q96LI9 332 aa6.35□□□□□ -1.39
CDC42SE2-208ENST00000505065 CLCC1Q96S66 551 aa6.35□□□□□ -1.39
CDC42SE2-208ENST00000505065 TNFRSF19Q9NS68 423 aa6.35□□□□□ -1.39
CDC42SE2-208ENST00000505065 A0A0G2JLM5 398 aa6.35□□□□□ -1.39
CDC42SE2-208ENST00000505065 HSPB1P04792 205 aaKnown RBP6.35□□□□□ -1.39
CDC42SE2-208ENST00000505065 PLP1P60201 277 aa6.35□□□□□ -1.39
CDC42SE2-208ENST00000505065 CD69Q07108 199 aa6.35□□□□□ -1.39
CDC42SE2-208ENST00000505065 FCN2Q15485 313 aa6.35□□□□□ -1.39
CDC42SE2-208ENST00000505065 IAH1Q2TAA2 248 aaPredicted RBP6.35□□□□□ -1.39
CDC42SE2-208ENST00000505065 GSG1LQ6UXU4 331 aa6.35□□□□□ -1.39
CDC42SE2-208ENST00000505065 AQP10Q96PS8 301 aa6.35□□□□□ -1.39
CDC42SE2-208ENST00000505065 C2CD3Q4AC94 2353 aa6.35□□□□□ -1.39
CDC42SE2-208ENST00000505065 MTORP42345 2549 aa6.35□□□□□ -1.39
CDC42SE2-208ENST00000505065 ADMP35318 185 aa6.35□□□□□ -1.39
CDC42SE2-208ENST00000505065 DLK1P80370 383 aa6.35□□□□□ -1.39
CDC42SE2-208ENST00000505065 OR4X2Q8NGF9 303 aa6.35□□□□□ -1.39
CDC42SE2-208ENST00000505065 CASTOR1Q8WTX7 329 aa6.35□□□□□ -1.39
CDC42SE2-208ENST00000505065 WI2-2373I1.2A0A1W2PRP0 233 aa6.34□□□□□ -1.39
CDC42SE2-208ENST00000505065 MPC2O95563 127 aa6.34□□□□□ -1.39
CDC42SE2-208ENST00000505065 IFNA21P01568 189 aa6.34□□□□□ -1.39
CDC42SE2-208ENST00000505065 CTSGP08311 255 aa6.34□□□□□ -1.39
CDC42SE2-208ENST00000505065 HOXB5P09067 269 aa6.34□□□□□ -1.39
CDC42SE2-208ENST00000505065 NKX2-1P43699 371 aaPredicted RBP6.34□□□□□ -1.39
CDC42SE2-208ENST00000505065 EGFEM1PQ0D2K5 195 aa6.34□□□□□ -1.39
CDC42SE2-208ENST00000505065 ARSJQ5FYB0 599 aaPredicted RBP6.34□□□□□ -1.39
CDC42SE2-208ENST00000505065 BSCL2Q96G97 398 aaPredicted RBP6.34□□□□□ -1.39
CDC42SE2-208ENST00000505065 ARV1Q9H2C2 271 aa6.34□□□□□ -1.39
CDC42SE2-208ENST00000505065 ELLP55199 621 aaPredicted RBP6.34□□□□□ -1.39
CDC42SE2-208ENST00000505065 ARL16Q0P5N6 197 aa6.34□□□□□ -1.39
CDC42SE2-208ENST00000505065 SPSB3Q6PJ21 355 aa6.34□□□□□ -1.39
CDC42SE2-208ENST00000505065 ADAMTSL5Q6ZMM2 481 aa6.34□□□□□ -1.39
CDC42SE2-208ENST00000505065 GRPEL2Q8TAA5 225 aa6.34□□□□□ -1.39
CDC42SE2-208ENST00000505065 DNAH9Q9NYC9 4486 aa6.34□□□□□ -1.39
CDC42SE2-208ENST00000505065 GOSR2O14653 212 aa6.34□□□□□ -1.39
CDC42SE2-208ENST00000505065 RAB25P57735 213 aa6.34□□□□□ -1.39
CDC42SE2-208ENST00000505065 YPEL3P61236 119 aaPredicted RBP6.34□□□□□ -1.39
CDC42SE2-208ENST00000505065 RHOGP84095 191 aa6.34□□□□□ -1.39
CDC42SE2-208ENST00000505065 RAB32Q13637 225 aa6.34□□□□□ -1.39
CDC42SE2-208ENST00000505065 SCARB1Q8WTV0 552 aa6.34□□□□□ -1.39
CDC42SE2-208ENST00000505065 IGKV1OR2-108A0A075B7D4 117 aa6.34□□□□□ -1.4
CDC42SE2-208ENST00000505065 K7EMT4 169 aa6.34□□□□□ -1.4
CDC42SE2-208ENST00000505065 CCSO14618 274 aa6.34□□□□□ -1.4
CDC42SE2-208ENST00000505065 IGLC1P0CG04 106 aa6.34□□□□□ -1.4
CDC42SE2-208ENST00000505065 OR13C7P0DN81 318 aa6.34□□□□□ -1.4
CDC42SE2-208ENST00000505065 RAP2BP61225 183 aa6.34□□□□□ -1.4
CDC42SE2-208ENST00000505065 ERHP84090 104 aaKnown RBP6.34□□□□□ -1.4
CDC42SE2-208ENST00000505065 BAXQ07812 192 aa6.34□□□□□ -1.4
CDC42SE2-208ENST00000505065 PLGLAQ15195 96 aa6.34□□□□□ -1.4
CDC42SE2-208ENST00000505065 NOXA1Q86UR1 476 aa6.34□□□□□ -1.4
CDC42SE2-208ENST00000505065 OR5AC2Q9NZP5 309 aa6.34□□□□□ -1.4
CDC42SE2-208ENST00000505065 PKD1L1Q8TDX9 2849 aa6.33□□□□□ -1.4
CDC42SE2-208ENST00000505065 IGSF23A1L1A6 192 aa6.33□□□□□ -1.4
CDC42SE2-208ENST00000505065 OR2C1O95371 312 aa6.33□□□□□ -1.4
CDC42SE2-208ENST00000505065 POLR2GP62487 172 aaKnown RBP eCLIP6.33□□□□□ -1.4
CDC42SE2-208ENST00000505065 HMSDA8MTL9 139 aa6.33□□□□□ -1.4
CDC42SE2-208ENST00000505065 CNIH1O95406 144 aa6.33□□□□□ -1.4
CDC42SE2-208ENST00000505065 NPY1RP25929 384 aa6.33□□□□□ -1.4
CDC42SE2-208ENST00000505065 ZNF345Q14585 488 aa6.33□□□□□ -1.4
CDC42SE2-208ENST00000505065 OR1S1Q8NH92 325 aa6.33□□□□□ -1.4
CDC42SE2-208ENST00000505065 TRGV9Q99603 122 aa6.33□□□□□ -1.4
CDC42SE2-208ENST00000505065 ZC4H2Q9NQZ6 224 aa6.33□□□□□ -1.4
CDC42SE2-208ENST00000505065 LINC00527Q9UJ94 153 aa6.33□□□□□ -1.4
CDC42SE2-208ENST00000505065 RNF222A6NCQ9 220 aa6.33□□□□□ -1.4
CDC42SE2-208ENST00000505065 IGKV1-17P01599 117 aa6.33□□□□□ -1.4
CDC42SE2-208ENST00000505065 OR8U8P0C7N1 319 aa6.33□□□□□ -1.4
CDC42SE2-208ENST00000505065 ECSCRQ19T08 205 aa6.33□□□□□ -1.4
CDC42SE2-208ENST00000505065 C15orf32Q32M92 178 aa6.33□□□□□ -1.4
CDC42SE2-208ENST00000505065 TNFSF18Q9UNG2 199 aa6.33□□□□□ -1.4
CDC42SE2-208ENST00000505065 PRKDCP78527 4128 aaKnown RBP6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 E5RGE8 158 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 CLN5O75503 358 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 ZNF329Q86UD4 541 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 PPP1R1CQ8WVI7 109 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 EEF1AKMT3Q96AZ1 226 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 FBXL7Q9UJT9 491 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 SLC45A2Q9UMX9 530 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 TSPAN15O95858 294 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 TRBV12-3P01733 135 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 SUB1P53999 127 aaKnown RBP eCLIP6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 GAMTQ14353 236 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 OR1S2Q8NGQ3 325 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 NEURL2Q9BR09 285 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 HIPK2Q9H2X6 1198 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 PEF1Q9UBV8 284 aaKnown RBP6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 IGHV4OR15-8A0A075B7B6 117 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 A0A087WW49 117 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 TGOLN2O43493 480 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 TRGV3P03979 118 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 REG1AP05451 166 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 ATP5G2Q06055 141 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 Q5BKY6 102 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 SAMD5Q5TGI4 173 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 FAM90A2PQ658T7 463 aa6.32□□□□□ -1.4
CDC42SE2-208ENST00000505065 ACSM6Q6P461 480 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms