RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 UFC1Q9Y3C8 167 aa10.75□□□□□ -0.69
HOXC9-202ENST00000504557 A8MWP6 167 aa10.74□□□□□ -0.69
HOXC9-202ENST00000504557 YIF1AO95070 293 aa10.74□□□□□ -0.69
HOXC9-202ENST00000504557 SURF2Q15527 256 aaPredicted RBP10.74□□□□□ -0.69
HOXC9-202ENST00000504557 RBPMS2Q6ZRY4 209 aaKnown RBP10.74□□□□□ -0.69
HOXC9-202ENST00000504557 GLYATL2Q8WU03 294 aa10.74□□□□□ -0.69
HOXC9-202ENST00000504557 ZNF436Q9C0F3 470 aaPredicted RBP10.74□□□□□ -0.69
HOXC9-202ENST00000504557 GPR132Q9UNW8 380 aa10.74□□□□□ -0.69
HOXC9-202ENST00000504557 IGHV3-49A0A0A0MS15 119 aa10.73□□□□□ -0.69
HOXC9-202ENST00000504557 CRYM-AS1A6NIL9 109 aa10.73□□□□□ -0.69
HOXC9-202ENST00000504557 F8W735 103 aaPredicted RBP10.73□□□□□ -0.69
HOXC9-202ENST00000504557 NUPL2O15504 423 aaKnown RBP10.73□□□□□ -0.69
HOXC9-202ENST00000504557 GNG7O60262 68 aa10.73□□□□□ -0.69
HOXC9-202ENST00000504557 P0C879 139 aa10.73□□□□□ -0.69
HOXC9-202ENST00000504557 ADMP35318 185 aa10.73□□□□□ -0.69
HOXC9-202ENST00000504557 MFAP4P55083 255 aa10.73□□□□□ -0.69
HOXC9-202ENST00000504557 SPSB3Q6PJ21 355 aa10.73□□□□□ -0.69
HOXC9-202ENST00000504557 Q6ZRM9 215 aa10.73□□□□□ -0.69
HOXC9-202ENST00000504557 SELENOHQ8IZQ5 122 aaKnown RBP10.73□□□□□ -0.69
HOXC9-202ENST00000504557 TOMM5Q8N4H5 51 aa10.73□□□□□ -0.69
HOXC9-202ENST00000504557 OR52B4Q8NGK2 314 aa10.73□□□□□ -0.69
HOXC9-202ENST00000504557 TMEM190Q8WZ59 177 aa10.73□□□□□ -0.69
HOXC9-202ENST00000504557 RBPMSQ93062 196 aaKnown RBP10.73□□□□□ -0.69
HOXC9-202ENST00000504557 SOSTQ9BQB4 213 aa10.73□□□□□ -0.69
HOXC9-202ENST00000504557 RBM38Q9H0Z9 239 aaKnown RBP10.73□□□□□ -0.69
HOXC9-202ENST00000504557 SRD5A3Q9H8P0 318 aa10.73□□□□□ -0.69
HOXC9-202ENST00000504557 C19orf73Q9NVV2 129 aa10.73□□□□□ -0.69
HOXC9-202ENST00000504557 CACNG5Q9UF02 275 aa10.73□□□□□ -0.69
HOXC9-202ENST00000504557 OR11H12B2RN74 326 aa10.72□□□□□ -0.69
HOXC9-202ENST00000504557 I3L2K1 104 aa10.72□□□□□ -0.69
HOXC9-202ENST00000504557 NDUFA4O00483 81 aa10.72□□□□□ -0.69
HOXC9-202ENST00000504557 B3GALNT1O75752 331 aa10.72□□□□□ -0.69
HOXC9-202ENST00000504557 CDS2O95674 445 aa10.72□□□□□ -0.69
HOXC9-202ENST00000504557 DHODHQ02127 395 aa10.72□□□□□ -0.69
HOXC9-202ENST00000504557 HAGHQ16775 308 aa10.72□□□□□ -0.69
HOXC9-202ENST00000504557 TMED4Q7Z7H5 227 aa10.72□□□□□ -0.69
HOXC9-202ENST00000504557 TMEM230Q96A57 120 aa10.72□□□□□ -0.69
HOXC9-202ENST00000504557 GPR146Q96CH1 333 aa10.72□□□□□ -0.69
HOXC9-202ENST00000504557 RETNQ9HD89 108 aa10.72□□□□□ -0.69
HOXC9-202ENST00000504557 DAZ1Q9NQZ3 744 aaKnown RBP10.72□□□□□ -0.69
HOXC9-202ENST00000504557 MRPL27Q9P0M9 148 aaKnown RBP10.72□□□□□ -0.69
HOXC9-202ENST00000504557 V9GYH0 126 aa10.72□□□□□ -0.69
HOXC9-202ENST00000504557 IGHV3OR16-13A0A075B7E8 117 aa10.71□□□□□ -0.69
HOXC9-202ENST00000504557 IGHV3-74A0A0B4J1X5 117 aa10.71□□□□□ -0.69
HOXC9-202ENST00000504557 CTSGP08311 255 aa10.71□□□□□ -0.69
HOXC9-202ENST00000504557 FAUP35544 74 aaKnown RBP10.71□□□□□ -0.69
HOXC9-202ENST00000504557 SLC16A13Q7RTY0 426 aa10.71□□□□□ -0.69
HOXC9-202ENST00000504557 ZNF114Q8NC26 417 aa10.71□□□□□ -0.69
HOXC9-202ENST00000504557 MARC2Q969Z3 335 aa10.71□□□□□ -0.69
HOXC9-202ENST00000504557 SCGB3A2Q96PL1 93 aa10.71□□□□□ -0.69
HOXC9-202ENST00000504557 HEYLQ9NQ87 328 aaPredicted RBP10.71□□□□□ -0.69
HOXC9-202ENST00000504557 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.71□□□□□ -0.69
HOXC9-202ENST00000504557 UBQLN2Q9UHD9 624 aa10.71□□□□□ -0.69
HOXC9-202ENST00000504557 KCNIP3Q9Y2W7 256 aa10.71□□□□□ -0.69
HOXC9-202ENST00000504557 HUWE1Q7Z6Z7 4374 aaKnown RBP10.7□□□□□ -0.7
HOXC9-202ENST00000504557 TENM3Q9P273 2699 aa10.7□□□□□ -0.7
HOXC9-202ENST00000504557 IGKV3-7A0A075B6H7 116 aa10.7□□□□□ -0.7
HOXC9-202ENST00000504557 CEBPZOSA8MTT3 80 aa10.7□□□□□ -0.7
HOXC9-202ENST00000504557 A8MZ25 164 aa10.7□□□□□ -0.7
HOXC9-202ENST00000504557 RNASE2P10153 161 aaKnown RBP10.7□□□□□ -0.7
HOXC9-202ENST00000504557 OPRK1P41145 380 aa10.7□□□□□ -0.7
HOXC9-202ENST00000504557 SUB1P53999 127 aaKnown RBP eCLIP10.7□□□□□ -0.7
HOXC9-202ENST00000504557 ELLP55199 621 aaPredicted RBP10.7□□□□□ -0.7
HOXC9-202ENST00000504557 AP3S2P59780 193 aa10.7□□□□□ -0.7
HOXC9-202ENST00000504557 RELQ04864 619 aaPredicted RBP10.7□□□□□ -0.7
HOXC9-202ENST00000504557 KLF9Q13886 244 aaPredicted RBP10.7□□□□□ -0.7
HOXC9-202ENST00000504557 TMEM187Q14656 261 aa10.7□□□□□ -0.7
HOXC9-202ENST00000504557 ZNF79Q15937 498 aa10.7□□□□□ -0.7
HOXC9-202ENST00000504557 FAM219AQ8IW50 185 aa10.7□□□□□ -0.7
HOXC9-202ENST00000504557 DUSP18Q8NEJ0 188 aa10.7□□□□□ -0.7
HOXC9-202ENST00000504557 TRIM63Q969Q1 353 aa10.7□□□□□ -0.7
HOXC9-202ENST00000504557 FAM110AQ9BQ89 295 aa10.7□□□□□ -0.7
HOXC9-202ENST00000504557 TM2D3Q9BRN9 247 aa10.7□□□□□ -0.7
HOXC9-202ENST00000504557 GAR1Q9NY12 217 aaKnown RBP10.7□□□□□ -0.7
HOXC9-202ENST00000504557 LINC00854A0A1B0GVQ3 168 aa10.69□□□□□ -0.7
HOXC9-202ENST00000504557 C8orf88P0DMB2 117 aa10.69□□□□□ -0.7
HOXC9-202ENST00000504557 INPP1P49441 399 aa10.69□□□□□ -0.7
HOXC9-202ENST00000504557 SPCS3P61009 180 aa10.69□□□□□ -0.7
HOXC9-202ENST00000504557 MLANAQ16655 118 aa10.69□□□□□ -0.7
HOXC9-202ENST00000504557 SPANXN2Q5MJ10 180 aa10.69□□□□□ -0.7
HOXC9-202ENST00000504557 CCDC190Q86UF4 302 aa10.69□□□□□ -0.7
HOXC9-202ENST00000504557 SPATA25Q9BR10 227 aa10.69□□□□□ -0.7
HOXC9-202ENST00000504557 STAB2Q8WWQ8 2551 aa10.68□□□□□ -0.7
HOXC9-202ENST00000504557 RBMY1BA6NDE4 496 aaKnown RBP10.68□□□□□ -0.7
HOXC9-202ENST00000504557 RBMY1EA6NEQ0 496 aaKnown RBP10.68□□□□□ -0.7
HOXC9-202ENST00000504557 RBMY1DP0C7P1 496 aaKnown RBP10.68□□□□□ -0.7
HOXC9-202ENST00000504557 VAMP1P23763 118 aa10.68□□□□□ -0.7
HOXC9-202ENST00000504557 NPBWR1P48145 328 aa10.68□□□□□ -0.7
HOXC9-202ENST00000504557 TFPI2P48307 235 aa10.68□□□□□ -0.7
HOXC9-202ENST00000504557 ANKRD55Q3KP44 614 aa10.68□□□□□ -0.7
HOXC9-202ENST00000504557 LYZL2Q7Z4W2 148 aa10.68□□□□□ -0.7
HOXC9-202ENST00000504557 ATP6V0BQ99437 205 aa10.68□□□□□ -0.7
HOXC9-202ENST00000504557 TXN2Q99757 166 aa10.68□□□□□ -0.7
HOXC9-202ENST00000504557 TMEM56-RWDD3S4R434 201 aa10.68□□□□□ -0.7
HOXC9-202ENST00000504557 IGHV3-66A0A0C4DH42 116 aa10.67□□□□□ -0.7
HOXC9-202ENST00000504557 CORTO00230 105 aa10.67□□□□□ -0.7
HOXC9-202ENST00000504557 SULT1A3P0DMM9 295 aa10.67□□□□□ -0.7
HOXC9-202ENST00000504557 SULT1A4P0DMN0 295 aa10.67□□□□□ -0.7
HOXC9-202ENST00000504557 ANXA3P12429 323 aa10.67□□□□□ -0.7
HOXC9-202ENST00000504557 SUPT4H1P63272 117 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms