RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 OR9G1Q8NH87 305 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 RNF138Q8WVD3 245 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 CHRDL1Q9BU40 450 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 PILRBQ9UKJ0 227 aa6.29□□□□□ -1.4
NEDD9-208ENST00000504387 IGHV2-70DA0A0C4DH43 119 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 IGLC7A0M8Q6 106 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 GAGE12BA1L429 117 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 GGTLC3B5MD39 225 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 FAM90A26D6RGX4 464 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 ITGB1BP1O14713 200 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 ERVK-16P61578 105 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 SSPNQ14714 243 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 TMEM164Q5U3C3 297 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 TEPPQ6URK8 271 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 DEFB108BQ8NET1 73 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 SLC25A40Q8TBP6 338 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 Q8TCH9 128 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 NUDT11Q96G61 164 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 ZPBPQ9BS86 351 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 GNB1LQ9BYB4 327 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 ENY2Q9NPA8 101 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 TMEM30CPA0ZSE6 113 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 PROP1O75360 226 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 AMY1AP04745 511 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 HOXC12P31275 282 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 CLDN18P56856 261 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 PMS2CLQ68D20 193 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 CLEC2AQ6UVW9 174 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 COLCA1Q6ZS62 124 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 TMEM251Q8N6I4 163 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 ZNRF1Q8ND25 227 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 NUDT10Q8NFP7 164 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 RND1Q92730 232 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 COQ2Q96H96 371 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 NABP2Q9BQ15 211 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 RTL8AQ9BWD3 113 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 TMEM140Q9NV12 185 aa6.28□□□□□ -1.4
NEDD9-208ENST00000504387 ZFHX2Q9C0A1 2572 aaPredicted RBP6.28□□□□□ -1.4
NEDD9-208ENST00000504387 CCL11P51671 97 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 PSG9Q00887 426 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 OR4F17Q8NGA8 305 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 TMEM45BQ96B21 275 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 C1orf159Q96HA4 380 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 TTTY12Q9BZ98 90 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 NPVFQ9HCQ7 196 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 SH2D2AQ9NP31 389 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 TNFRSF19Q9NS68 423 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 TCF19Q9Y242 345 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 POLDIP2Q9Y2S7 368 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 IGHV2-26A0A0B4J1V2 119 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 HIGD1CA8MV81 97 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 K7EMI3 77 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 TAX1BP3O14907 124 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 SPINT2O43291 252 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 TIMM8AO60220 97 aaPredicted RBP6.27□□□□□ -1.41
NEDD9-208ENST00000504387 GFRA3O60609 400 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 TMEM11P17152 192 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 MPV17P39210 176 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 OPRK1P41145 380 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 MEOX1P50221 254 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 SMIM15Q7Z3B0 74 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 WFDC3Q8IUB2 231 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 MUC15Q8N387 334 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 TEX45Q8NA69 505 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 OR10W1Q8NGF6 305 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 PGLYRP4Q96LB8 373 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 TRIB1Q96RU8 372 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 IL19Q9UHD0 177 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 KLF13Q9Y2Y9 288 aaPredicted RBP6.27□□□□□ -1.41
NEDD9-208ENST00000504387 ACACAQ13085 2346 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 MT-CO2P00403 227 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 UBE2L3P68036 154 aaKnown RBP6.27□□□□□ -1.41
NEDD9-208ENST00000504387 TRIP6Q15654 476 aaKnown RBP6.27□□□□□ -1.41
NEDD9-208ENST00000504387 S1PR3Q99500 378 aa6.27□□□□□ -1.41
NEDD9-208ENST00000504387 CDX2Q99626 313 aaPredicted RBP6.27□□□□□ -1.41
NEDD9-208ENST00000504387 SPTAN1Q13813 2472 aaKnown RBP6.26□□□□□ -1.41
NEDD9-208ENST00000504387 MGAQ8IWI9 3026 aa6.26□□□□□ -1.41
NEDD9-208ENST00000504387 LOC102723996A0A087X1L8 192 aa6.26□□□□□ -1.41
NEDD9-208ENST00000504387 OR5B21A6NL26 309 aa6.26□□□□□ -1.41
NEDD9-208ENST00000504387 ZNF134P52741 427 aa6.26□□□□□ -1.41
NEDD9-208ENST00000504387 RAB31Q13636 194 aa6.26□□□□□ -1.41
NEDD9-208ENST00000504387 C1orf185Q5T7R7 199 aa6.26□□□□□ -1.41
NEDD9-208ENST00000504387 RIPPLY2Q5TAB7 128 aa6.26□□□□□ -1.41
NEDD9-208ENST00000504387 WDR73Q6P4I2 378 aa6.26□□□□□ -1.41
NEDD9-208ENST00000504387 C1orf229Q6ZS94 237 aaPredicted RBP6.26□□□□□ -1.41
NEDD9-208ENST00000504387 FAM214BQ7L5A3 538 aa6.26□□□□□ -1.41
NEDD9-208ENST00000504387 NUP35Q8NFH5 326 aa6.26□□□□□ -1.41
NEDD9-208ENST00000504387 SNRNP40Q96DI7 357 aaKnown RBP6.26□□□□□ -1.41
NEDD9-208ENST00000504387 FAM173AQ9BQD7 235 aa6.26□□□□□ -1.41
NEDD9-208ENST00000504387 IGHV1-69-2A0A0G2JMI3 117 aa6.26□□□□□ -1.41
NEDD9-208ENST00000504387 ISLRO14498 428 aa6.26□□□□□ -1.41
NEDD9-208ENST00000504387 GNG7O60262 68 aa6.26□□□□□ -1.41
NEDD9-208ENST00000504387 TBC1D28Q2M2D7 210 aa6.26□□□□□ -1.41
NEDD9-208ENST00000504387 KRTAP27-1Q3LI81 207 aa6.26□□□□□ -1.41
NEDD9-208ENST00000504387 TAAR6Q96RI8 345 aa6.26□□□□□ -1.41
NEDD9-208ENST00000504387 MPC1Q9Y5U8 109 aa6.26□□□□□ -1.41
NEDD9-208ENST00000504387 BDP1A6H8Y1 2624 aa6.26□□□□□ -1.41
NEDD9-208ENST00000504387 IGKV1OR2-108A0A075B7D4 117 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 HSBP1L1C9JCN9 74 aa6.25□□□□□ -1.41
NEDD9-208ENST00000504387 HLA-DQA1P01909 254 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms