RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 CEND1Q8N111 149 aa5.21□□□□□ -1.58
CLCN3-204ENST00000504131 GCSAMQ8N6F7 178 aa5.21□□□□□ -1.58
CLCN3-204ENST00000504131 SSC4DQ8WTU2 575 aa5.21□□□□□ -1.58
CLCN3-204ENST00000504131 TAAR2Q9P1P5 351 aa5.21□□□□□ -1.58
CLCN3-204ENST00000504131 A0A087WUU8 490 aa5.21□□□□□ -1.58
CLCN3-204ENST00000504131 ELANEP08246 267 aa5.21□□□□□ -1.58
CLCN3-204ENST00000504131 BTCP35070 178 aa5.21□□□□□ -1.58
CLCN3-204ENST00000504131 LOXL1Q08397 574 aaPredicted RBP5.21□□□□□ -1.58
CLCN3-204ENST00000504131 ICAM4Q14773 271 aa5.21□□□□□ -1.58
CLCN3-204ENST00000504131 ATXN8Q156A1 80 aa5.21□□□□□ -1.58
CLCN3-204ENST00000504131 EFNB3Q15768 340 aa5.21□□□□□ -1.58
CLCN3-204ENST00000504131 CLEC7AQ9BXN2 247 aa5.21□□□□□ -1.58
CLCN3-204ENST00000504131 IL36RNQ9UBH0 155 aa5.21□□□□□ -1.58
CLCN3-204ENST00000504131 YLPM1P49750 1951 aaKnown RBP5.21□□□□□ -1.58
CLCN3-204ENST00000504131 SMIM28A0A1B0GU29 152 aa5.21□□□□□ -1.58
CLCN3-204ENST00000504131 FRG2CA6NGY1 282 aa5.21□□□□□ -1.58
CLCN3-204ENST00000504131 GATA2P23769 480 aaPredicted RBP5.21□□□□□ -1.58
CLCN3-204ENST00000504131 MFAP2P55001 183 aa5.21□□□□□ -1.58
CLCN3-204ENST00000504131 PRR30Q53SZ7 412 aaPredicted RBP5.21□□□□□ -1.58
CLCN3-204ENST00000504131 FOXI2Q6ZQN5 318 aa5.21□□□□□ -1.58
CLCN3-204ENST00000504131 AAED1Q7RTV5 226 aa5.21□□□□□ -1.58
CLCN3-204ENST00000504131 FGF13Q92913 245 aa5.21□□□□□ -1.58
CLCN3-204ENST00000504131 IGKCP01834 107 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 PRDM14Q9GZV8 571 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 TRBV4-1A0A0J9YWV2 114 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 FAM90A7PA6NKC0 464 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 FAM90A22PA8MWA6 464 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 FAM90A12PA8MX19 464 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 FAM90A23PA8MXZ1 464 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 FAM72CH0Y354 149 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 CCL16O15467 120 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 ZNF823P16415 610 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 PCBP3P57721 371 aaKnown RBP5.2□□□□□ -1.58
CLCN3-204ENST00000504131 PLGLB1Q02325 96 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 FAM72AQ5TYM5 149 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 FAM72DQ6L9T8 149 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 SPSB3Q6PJ21 355 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 FAM72BQ86X60 149 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 RTBDNQ9BSG5 229 aaPredicted RBP5.2□□□□□ -1.58
CLCN3-204ENST00000504131 PLA2G12AQ9BZM1 189 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 PROCRQ9UNN8 238 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 SMIM26A0A096LP01 95 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 TRAV17A0A0B4J275 112 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 C9JQL5 133 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 DNAL4O96015 105 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 SLC25A1P53007 311 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 RPL23P62829 140 aaKnown RBP5.2□□□□□ -1.58
CLCN3-204ENST00000504131 CLDND2Q8NHS1 167 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 RND1Q92730 232 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 RNF126Q9BV68 326 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 IL36BQ9NZH7 164 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 MYH14Q7Z406 1995 aaKnown RBP5.2□□□□□ -1.58
CLCN3-204ENST00000504131 RBAKDNA6NC62 111 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 K7ERJ3 54 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 SYNGR2O43760 224 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 CTGFP29279 349 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 GFERP55789 205 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 PAX8Q06710 450 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 ZNF493Q6ZR52 646 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 TEN1Q86WV5 123 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 EXOC3-AS1Q8N2X6 119 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 RASL10BQ96S79 203 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 PRDM6Q9NQX0 595 aa5.2□□□□□ -1.58
CLCN3-204ENST00000504131 TRBV20OR9-2A0A075B6H5 130 aa5.19□□□□□ -1.58
CLCN3-204ENST00000504131 TRAV41A0A0B4J266 112 aa5.19□□□□□ -1.58
CLCN3-204ENST00000504131 NTF4P34130 210 aa5.19□□□□□ -1.58
CLCN3-204ENST00000504131 FUSP35637 526 aaKnown RBP eCLIP5.19□□□□□ -1.58
CLCN3-204ENST00000504131 COA6Q5JTJ3 125 aaKnown RBP5.19□□□□□ -1.58
CLCN3-204ENST00000504131 MRPL2Q5T653 305 aaKnown RBP5.19□□□□□ -1.58
CLCN3-204ENST00000504131 APRG1Q8IVJ8 170 aa5.19□□□□□ -1.58
CLCN3-204ENST00000504131 TRAV26-2A0A0B4J265 109 aa5.19□□□□□ -1.58
CLCN3-204ENST00000504131 RPS28P62857 69 aaKnown RBP5.19□□□□□ -1.58
CLCN3-204ENST00000504131 HOGA1Q86XE5 327 aa5.19□□□□□ -1.58
CLCN3-204ENST00000504131 CLECL1Q8IZS7 167 aa5.19□□□□□ -1.58
CLCN3-204ENST00000504131 IFI27L2Q9H2X8 130 aa5.19□□□□□ -1.58
CLCN3-204ENST00000504131 PRR13Q9NZ81 148 aa5.19□□□□□ -1.58
CLCN3-204ENST00000504131 DSPPQ9NZW4 1301 aa5.19□□□□□ -1.58
CLCN3-204ENST00000504131 DICER1Q9UPY3 1922 aaKnown RBP5.19□□□□□ -1.58
CLCN3-204ENST00000504131 CELA3BP08861 270 aa5.19□□□□□ -1.58
CLCN3-204ENST00000504131 COX8AP10176 69 aa5.19□□□□□ -1.58
CLCN3-204ENST00000504131 ZNF708P17019 499 aa5.19□□□□□ -1.58
CLCN3-204ENST00000504131 LMO2P25791 158 aa5.19□□□□□ -1.58
CLCN3-204ENST00000504131 GCHFRP30047 84 aa5.19□□□□□ -1.58
CLCN3-204ENST00000504131 CLDN2P57739 230 aa5.19□□□□□ -1.58
CLCN3-204ENST00000504131 ZNF501Q96CX3 271 aaPredicted RBP5.19□□□□□ -1.58
CLCN3-204ENST00000504131 CHAC1Q9BUX1 264 aa5.19□□□□□ -1.58
CLCN3-204ENST00000504131 AICDAQ9GZX7 198 aa5.19□□□□□ -1.58
CLCN3-204ENST00000504131 J3QQQ9 107 aa5.19□□□□□ -1.58
CLCN3-204ENST00000504131 SS18L1O75177 396 aaPredicted RBP5.19□□□□□ -1.58
CLCN3-204ENST00000504131 NCR2O95944 276 aa5.19□□□□□ -1.58
CLCN3-204ENST00000504131 IGHG3P01860 377 aa5.19□□□□□ -1.58
CLCN3-204ENST00000504131 HLA-DRB4P13762 266 aa5.19□□□□□ -1.58
CLCN3-204ENST00000504131 AQP3Q92482 292 aa5.19□□□□□ -1.58
CLCN3-204ENST00000504131 DSCR8Q96T75 97 aa5.19□□□□□ -1.58
CLCN3-204ENST00000504131 HLA-DRB4X5D2U9 266 aa5.19□□□□□ -1.58
CLCN3-204ENST00000504131 PAPPA2Q9BXP8 1791 aa5.19□□□□□ -1.58
CLCN3-204ENST00000504131 LOC389332A0A1B0GUA5 103 aa5.18□□□□□ -1.58
CLCN3-204ENST00000504131 SRSF10O75494 262 aaKnown RBP5.18□□□□□ -1.58
CLCN3-204ENST00000504131 FOXE3Q13461 319 aa5.18□□□□□ -1.58
CLCN3-204ENST00000504131 LCNL1Q6ZST4 164 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms