RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 MRPS26Q9BYN8 205 aaKnown RBP8.93□□□□□ -0.98
MED28-203ENST00000503945 SMPXQ9UHP9 88 aa8.93□□□□□ -0.98
MED28-203ENST00000503945 A0A0B4J293 547 aa8.92□□□□□ -0.98
MED28-203ENST00000503945 F8W735 103 aaPredicted RBP8.92□□□□□ -0.98
MED28-203ENST00000503945 GABARAPH6UMI1 98 aa8.92□□□□□ -0.98
MED28-203ENST00000503945 CTDSP2O14595 271 aa8.92□□□□□ -0.98
MED28-203ENST00000503945 ZNF207O43670 478 aaKnown RBP8.92□□□□□ -0.98
MED28-203ENST00000503945 GNG7O60262 68 aa8.92□□□□□ -0.98
MED28-203ENST00000503945 B3GALNT1O75752 331 aa8.92□□□□□ -0.98
MED28-203ENST00000503945 MT-CO2P00403 227 aa8.92□□□□□ -0.98
MED28-203ENST00000503945 SMIM18P0DKX4 95 aa8.92□□□□□ -0.98
MED28-203ENST00000503945 FCGR2BP31994 310 aaPredicted RBP8.92□□□□□ -0.98
MED28-203ENST00000503945 ETV6P41212 452 aa8.92□□□□□ -0.98
MED28-203ENST00000503945 NPBWR1P48145 328 aa8.92□□□□□ -0.98
MED28-203ENST00000503945 AKR1C2P52895 323 aa8.92□□□□□ -0.98
MED28-203ENST00000503945 MRPS10P82664 201 aaKnown RBP8.92□□□□□ -0.98
MED28-203ENST00000503945 TRIM16LQ309B1 348 aa8.92□□□□□ -0.98
MED28-203ENST00000503945 SP6Q3SY56 376 aa8.92□□□□□ -0.98
MED28-203ENST00000503945 STEAP1BQ6NZ63 245 aa8.92□□□□□ -0.98
MED28-203ENST00000503945 ZNF114Q8NC26 417 aa8.92□□□□□ -0.98
MED28-203ENST00000503945 TMEM116Q8NCL8 245 aa8.92□□□□□ -0.98
MED28-203ENST00000503945 TP53RKQ96S44 253 aa8.92□□□□□ -0.98
MED28-203ENST00000503945 ENY2Q9NPA8 101 aa8.92□□□□□ -0.98
MED28-203ENST00000503945 RABL2AQ9UBK7 228 aaPredicted RBP8.92□□□□□ -0.98
MED28-203ENST00000503945 RABL2BQ9UNT1 228 aa8.92□□□□□ -0.98
MED28-203ENST00000503945 OR4C46A6NHA9 309 aa8.91□□□□□ -0.98
MED28-203ENST00000503945 IGHV3-48P01763 117 aa8.91□□□□□ -0.98
MED28-203ENST00000503945 CD74P04233 296 aa8.91□□□□□ -0.98
MED28-203ENST00000503945 APOC4P55056 127 aa8.91□□□□□ -0.98
MED28-203ENST00000503945 PAFAH1B2P68402 229 aa8.91□□□□□ -0.98
MED28-203ENST00000503945 MEF2DQ14814 521 aa8.91□□□□□ -0.98
MED28-203ENST00000503945 IZUMO4Q1ZYL8 232 aa8.91□□□□□ -0.98
MED28-203ENST00000503945 SLC35G3Q8N808 338 aa8.91□□□□□ -0.98
MED28-203ENST00000503945 OR4D10Q8NGI6 311 aa8.91□□□□□ -0.98
MED28-203ENST00000503945 RNASE11Q8TAA1 199 aaKnown RBP8.91□□□□□ -0.98
MED28-203ENST00000503945 DIRAS2Q96HU8 199 aa8.91□□□□□ -0.98
MED28-203ENST00000503945 RHPN1-AS1Q9BWJ2 59 aa8.91□□□□□ -0.98
MED28-203ENST00000503945 NXF2Q9GZY0 626 aaKnown RBP8.91□□□□□ -0.98
MED28-203ENST00000503945 UBQLN2Q9UHD9 624 aa8.91□□□□□ -0.98
MED28-203ENST00000503945 C14orf166Q9Y224 244 aaKnown RBP8.91□□□□□ -0.98
MED28-203ENST00000503945 IGHV7-4-1A0A0J9YVY3 117 aa8.9□□□□□ -0.98
MED28-203ENST00000503945 TEX13DA0A0J9YY54 714 aaPredicted RBP8.9□□□□□ -0.98
MED28-203ENST00000503945 DISC1C4P0D8 188 aa8.9□□□□□ -0.98
MED28-203ENST00000503945 INS-IGF2F8WCM5 200 aa8.9□□□□□ -0.98
MED28-203ENST00000503945 UBE2CO00762 179 aa8.9□□□□□ -0.98
MED28-203ENST00000503945 CHEK1O14757 476 aa8.9□□□□□ -0.98
MED28-203ENST00000503945 ST8SIA3O43173 380 aa8.9□□□□□ -0.98
MED28-203ENST00000503945 IGKV1-5P01602 117 aa8.9□□□□□ -0.98
MED28-203ENST00000503945 CD5P06127 495 aa8.9□□□□□ -0.98
MED28-203ENST00000503945 CTSDP07339 412 aaPredicted RBP8.9□□□□□ -0.98
MED28-203ENST00000503945 BMI1P35226 326 aa8.9□□□□□ -0.98
MED28-203ENST00000503945 ALDH3B2P48448 385 aa8.9□□□□□ -0.98
MED28-203ENST00000503945 PPP5CP53041 499 aa8.9□□□□□ -0.98
MED28-203ENST00000503945 SPINK9Q5DT21 86 aa8.9□□□□□ -0.98
MED28-203ENST00000503945 CLVS1Q8IUQ0 354 aaPredicted RBP8.9□□□□□ -0.98
MED28-203ENST00000503945 STPG3Q8N7X2 389 aa8.9□□□□□ -0.98
MED28-203ENST00000503945 OR13C8Q8NGS7 320 aa8.9□□□□□ -0.98
MED28-203ENST00000503945 MARCH1Q8TCQ1 289 aa8.9□□□□□ -0.98
MED28-203ENST00000503945 OR10C1Q96KK4 312 aa8.9□□□□□ -0.98
MED28-203ENST00000503945 RNF2Q99496 336 aa8.9□□□□□ -0.98
MED28-203ENST00000503945 OVOL2Q9BRP0 275 aa8.9□□□□□ -0.98
MED28-203ENST00000503945 GINS3Q9BRX5 216 aa8.9□□□□□ -0.98
MED28-203ENST00000503945 C6orf62Q9GZU0 229 aaPredicted RBP8.9□□□□□ -0.98
MED28-203ENST00000503945 MIXL1Q9H2W2 232 aa8.9□□□□□ -0.98
MED28-203ENST00000503945 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.9□□□□□ -0.98
MED28-203ENST00000503945 CORTO00230 105 aa8.89□□□□□ -0.99
MED28-203ENST00000503945 SPRY2O43597 315 aa8.89□□□□□ -0.99
MED28-203ENST00000503945 CDS2O95674 445 aa8.89□□□□□ -0.99
MED28-203ENST00000503945 TMEM50AO95807 157 aa8.89□□□□□ -0.99
MED28-203ENST00000503945 TMBIM6P55061 237 aa8.89□□□□□ -0.99
MED28-203ENST00000503945 DHODHQ02127 395 aa8.89□□□□□ -0.99
MED28-203ENST00000503945 IL18Q14116 193 aa8.89□□□□□ -0.99
MED28-203ENST00000503945 SPCS2Q15005 226 aa8.89□□□□□ -0.99
MED28-203ENST00000503945 Q6ZWC4 215 aa8.89□□□□□ -0.99
MED28-203ENST00000503945 FAM219AQ8IW50 185 aa8.89□□□□□ -0.99
MED28-203ENST00000503945 RAB2BQ8WUD1 216 aa8.89□□□□□ -0.99
MED28-203ENST00000503945 KCNIP3Q9Y2W7 256 aa8.89□□□□□ -0.99
MED28-203ENST00000503945 IGHV3-49A0A0A0MS15 119 aa8.88□□□□□ -0.99
MED28-203ENST00000503945 KIR2DL5BA0A0G2JN68 375 aa8.88□□□□□ -0.99
MED28-203ENST00000503945 KIR2DL5BA0A0G2JPC4 375 aa8.88□□□□□ -0.99
MED28-203ENST00000503945 SCGB2A1O75556 95 aa8.88□□□□□ -0.99
MED28-203ENST00000503945 P0C879 139 aa8.88□□□□□ -0.99
MED28-203ENST00000503945 AKAIN1P0CW23 69 aa8.88□□□□□ -0.99
MED28-203ENST00000503945 UCP1P25874 307 aa8.88□□□□□ -0.99
MED28-203ENST00000503945 HOXA1P49639 335 aaPredicted RBP8.88□□□□□ -0.99
MED28-203ENST00000503945 SPCS3P61009 180 aa8.88□□□□□ -0.99
MED28-203ENST00000503945 RPL11P62913 178 aaKnown RBP8.88□□□□□ -0.99
MED28-203ENST00000503945 SURF2Q15527 256 aaPredicted RBP8.88□□□□□ -0.99
MED28-203ENST00000503945 TOMM20LQ6UXN7 152 aa8.88□□□□□ -0.99
MED28-203ENST00000503945 KIR2DL5AQ8N109 375 aa8.88□□□□□ -0.99
MED28-203ENST00000503945 KIR2DL5BQ8NHK3 375 aa8.88□□□□□ -0.99
MED28-203ENST00000503945 GLYATL2Q8WU03 294 aa8.88□□□□□ -0.99
MED28-203ENST00000503945 GALNT14Q96FL9 552 aa8.88□□□□□ -0.99
MED28-203ENST00000503945 SCGB3A2Q96PL1 93 aa8.88□□□□□ -0.99
MED28-203ENST00000503945 RTBDNQ9BSG5 229 aaPredicted RBP8.88□□□□□ -0.99
MED28-203ENST00000503945 TMEM222Q9H0R3 208 aa8.88□□□□□ -0.99
MED28-203ENST00000503945 TP53TG1Q9Y2A0 90 aa8.88□□□□□ -0.99
MED28-203ENST00000503945 ALMS1Q8TCU4 4167 aa8.87□□□□□ -0.99
MED28-203ENST00000503945 IGKV3-7A0A075B6H7 116 aa8.87□□□□□ -0.99
MED28-203ENST00000503945 DNASE2O00115 360 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms