RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 SUB1P53999 127 aaKnown RBP eCLIP13.42□□□□□ -0.26
VCAN-204ENST00000502527 TGIF2LXQ8IUE1 241 aa13.42□□□□□ -0.26
VCAN-204ENST00000502527 RNF2Q99496 336 aa13.42□□□□□ -0.26
VCAN-204ENST00000502527 MRPL32Q9BYC8 188 aaKnown RBP13.42□□□□□ -0.26
VCAN-204ENST00000502527 PRDM13Q9H4Q3 707 aa13.42□□□□□ -0.26
VCAN-204ENST00000502527 GVINP1Q7Z2Y8 2422 aa13.42□□□□□ -0.26
VCAN-204ENST00000502527 TRAV9-1A0A075B6T8 112 aa13.41□□□□□ -0.26
VCAN-204ENST00000502527 K7EN84 100 aa13.41□□□□□ -0.26
VCAN-204ENST00000502527 COL8A2P25067 703 aa13.41□□□□□ -0.26
VCAN-204ENST00000502527 CNN1P51911 297 aaKnown RBP13.41□□□□□ -0.26
VCAN-204ENST00000502527 DIAPH2-AS1Q14236 149 aa13.41□□□□□ -0.26
VCAN-204ENST00000502527 VMA21Q3ZAQ7 101 aa13.41□□□□□ -0.26
VCAN-204ENST00000502527 EAF1Q96JC9 268 aaPredicted RBP13.41□□□□□ -0.26
VCAN-204ENST00000502527 IGHV1-69-2A0A0G2JMI3 117 aa13.41□□□□□ -0.26
VCAN-204ENST00000502527 HELTA6NFD8 242 aa13.41□□□□□ -0.26
VCAN-204ENST00000502527 IGLV2-23P01705 113 aa13.41□□□□□ -0.26
VCAN-204ENST00000502527 C8orf88P0DMB2 117 aa13.41□□□□□ -0.26
VCAN-204ENST00000502527 APOBEC3AP31941 199 aaPredicted RBP13.41□□□□□ -0.26
VCAN-204ENST00000502527 FOXC1Q12948 553 aa13.41□□□□□ -0.26
VCAN-204ENST00000502527 OR5R1Q8NH85 324 aa13.41□□□□□ -0.26
VCAN-204ENST00000502527 OR2T6Q8NHC8 308 aa13.41□□□□□ -0.26
VCAN-204ENST00000502527 ZNF503Q96F45 646 aa13.41□□□□□ -0.26
VCAN-204ENST00000502527 SLC25A33Q9BSK2 321 aa13.41□□□□□ -0.26
VCAN-204ENST00000502527 IL36BQ9NZH7 164 aa13.41□□□□□ -0.26
VCAN-204ENST00000502527 E7EUB6 86 aa13.4□□□□□ -0.26
VCAN-204ENST00000502527 K7ENP7 123 aa13.4□□□□□ -0.26
VCAN-204ENST00000502527 RD3LP0DJH9 198 aa13.4□□□□□ -0.26
VCAN-204ENST00000502527 IGHV1-8P0DP01 117 aa13.4□□□□□ -0.26
VCAN-204ENST00000502527 ZNF90Q03938 601 aa13.4□□□□□ -0.26
VCAN-204ENST00000502527 WT1-ASQ06250 92 aa13.4□□□□□ -0.26
VCAN-204ENST00000502527 JOSD1Q15040 202 aaPredicted RBP13.4□□□□□ -0.26
VCAN-204ENST00000502527 VKORC1Q9BQB6 163 aa13.4□□□□□ -0.26
VCAN-204ENST00000502527 ZNF430Q9H8G1 570 aaPredicted RBP13.4□□□□□ -0.26
VCAN-204ENST00000502527 ZGRF1Q86YA3 2104 aa13.4□□□□□ -0.26
VCAN-204ENST00000502527 B9A039 149 aa13.4□□□□□ -0.27
VCAN-204ENST00000502527 CD3EP07766 207 aa13.4□□□□□ -0.27
VCAN-204ENST00000502527 CRYBB3P26998 211 aa13.4□□□□□ -0.27
VCAN-204ENST00000502527 GNG4P50150 75 aa13.4□□□□□ -0.27
VCAN-204ENST00000502527 DNAJC4Q9NNZ3 241 aa13.4□□□□□ -0.27
VCAN-204ENST00000502527 TNCP24821 2201 aa13.39□□□□□ -0.27
VCAN-204ENST00000502527 TRBV23-1A0A0A0MS06 115 aa13.39□□□□□ -0.27
VCAN-204ENST00000502527 A0A1W2PRE2 83 aa13.39□□□□□ -0.27
VCAN-204ENST00000502527 CGB1A6NKQ9 187 aa13.39□□□□□ -0.27
VCAN-204ENST00000502527 LGALS7P47929 136 aa13.39□□□□□ -0.27
VCAN-204ENST00000502527 YPEL3P61236 119 aaPredicted RBP13.39□□□□□ -0.27
VCAN-204ENST00000502527 TMEM18Q96B42 140 aa13.39□□□□□ -0.27
VCAN-204ENST00000502527 TMEM133Q9H2Q1 129 aa13.39□□□□□ -0.27
VCAN-204ENST00000502527 ACACAQ13085 2346 aa13.38□□□□□ -0.27
VCAN-204ENST00000502527 CENPWQ5EE01 88 aa13.38□□□□□ -0.27
VCAN-204ENST00000502527 C10orf55Q5SWW7 151 aa13.38□□□□□ -0.27
VCAN-204ENST00000502527 SPOCK3Q9BQ16 436 aa13.38□□□□□ -0.27
VCAN-204ENST00000502527 PSMB11A5LHX3 300 aa13.38□□□□□ -0.27
VCAN-204ENST00000502527 SLC25A17O43808 307 aa13.38□□□□□ -0.27
VCAN-204ENST00000502527 OR10J4P0C629 311 aa13.38□□□□□ -0.27
VCAN-204ENST00000502527 ERVFC1-1P60608 527 aa13.38□□□□□ -0.27
VCAN-204ENST00000502527 SSX2Q16385 188 aa13.38□□□□□ -0.27
VCAN-204ENST00000502527 PRSS8Q16651 343 aa13.38□□□□□ -0.27
VCAN-204ENST00000502527 C9orf152Q5JTZ5 239 aa13.38□□□□□ -0.27
VCAN-204ENST00000502527 OR1L4Q8NGR5 311 aa13.38□□□□□ -0.27
VCAN-204ENST00000502527 GGTLC3B5MD39 225 aa13.37□□□□□ -0.27
VCAN-204ENST00000502527 SLC17A3O00476 420 aa13.37□□□□□ -0.27
VCAN-204ENST00000502527 PPOXP50336 477 aa13.37□□□□□ -0.27
VCAN-204ENST00000502527 PKIAP61925 76 aa13.37□□□□□ -0.27
VCAN-204ENST00000502527 RPEL1Q2QD12 228 aa13.37□□□□□ -0.27
VCAN-204ENST00000502527 FAM209BQ5JX69 171 aa13.37□□□□□ -0.27
VCAN-204ENST00000502527 MRPL41Q8IXM3 137 aaKnown RBP13.37□□□□□ -0.27
VCAN-204ENST00000502527 TNFRSF14Q92956 283 aa13.37□□□□□ -0.27
VCAN-204ENST00000502527 FNDC4Q9H6D8 234 aaPredicted RBP13.37□□□□□ -0.27
VCAN-204ENST00000502527 ENSAO43768 121 aaKnown RBP13.36□□□□□ -0.27
VCAN-204ENST00000502527 COX7A2P2O60397 106 aa13.36□□□□□ -0.27
VCAN-204ENST00000502527 GCGP01275 180 aa13.36□□□□□ -0.27
VCAN-204ENST00000502527 GZMBP10144 247 aa13.36□□□□□ -0.27
VCAN-204ENST00000502527 SUMO1P63165 101 aaKnown RBP13.36□□□□□ -0.27
VCAN-204ENST00000502527 TIGITQ495A1 244 aa13.36□□□□□ -0.27
VCAN-204ENST00000502527 GBGT1Q8N5D6 347 aa13.36□□□□□ -0.27
VCAN-204ENST00000502527 C11orf42Q8N5U0 333 aa13.36□□□□□ -0.27
VCAN-204ENST00000502527 NPIPB3Q92617 1050 aa13.36□□□□□ -0.27
VCAN-204ENST00000502527 FAM167A-AS1Q96KT0 104 aa13.36□□□□□ -0.27
VCAN-204ENST00000502527 SLC25A2Q9BXI2 301 aa13.36□□□□□ -0.27
VCAN-204ENST00000502527 RALYQ9UKM9 306 aaKnown RBP13.36□□□□□ -0.27
VCAN-204ENST00000502527 ROS1P08922 2347 aa13.36□□□□□ -0.27
VCAN-204ENST00000502527 APC2O95996 2303 aa13.36□□□□□ -0.27
VCAN-204ENST00000502527 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.36□□□□□ -0.27
VCAN-204ENST00000502527 TCRBV4S1A1TA0A5B7 111 aa13.36□□□□□ -0.27
VCAN-204ENST00000502527 SELENOTP62341 195 aa13.36□□□□□ -0.27
VCAN-204ENST00000502527 THAP8Q8NA92 274 aa13.36□□□□□ -0.27
VCAN-204ENST00000502527 SCNM1Q9BWG6 230 aa13.36□□□□□ -0.27
VCAN-204ENST00000502527 MUC6Q6W4X9 2439 aa13.36□□□□□ -0.27
VCAN-204ENST00000502527 TSTD3H0UI37 97 aa13.35□□□□□ -0.27
VCAN-204ENST00000502527 PRRX1P54821 245 aa13.35□□□□□ -0.27
VCAN-204ENST00000502527 LGALS4P56470 323 aa13.35□□□□□ -0.27
VCAN-204ENST00000502527 BPIFB3P59826 476 aa13.35□□□□□ -0.27
VCAN-204ENST00000502527 UBE2L3P68036 154 aaKnown RBP13.35□□□□□ -0.27
VCAN-204ENST00000502527 OR5I1Q13606 314 aa13.35□□□□□ -0.27
VCAN-204ENST00000502527 C10orf113Q5VZT2 155 aa13.35□□□□□ -0.27
VCAN-204ENST00000502527 MMD2Q8IY49 270 aa13.35□□□□□ -0.27
VCAN-204ENST00000502527 TEX45Q8NA69 505 aa13.35□□□□□ -0.27
VCAN-204ENST00000502527 OR5AU1Q8NGC0 362 aa13.35□□□□□ -0.27
VCAN-204ENST00000502527 V9GYV3 84 aa13.35□□□□□ -0.27
VCAN-204ENST00000502527 TRAV5A0A0B4J249 113 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms