RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 SDC2P34741 201 aa10.6□□□□□ -0.71
SEC61A1-207ENST00000498837 RFX2P48378 723 aa10.6□□□□□ -0.71
SEC61A1-207ENST00000498837 RPL11P62913 178 aaKnown RBP10.6□□□□□ -0.71
SEC61A1-207ENST00000498837 MXD1Q05195 221 aa10.6□□□□□ -0.71
SEC61A1-207ENST00000498837 CADM3Q8N126 398 aa10.6□□□□□ -0.71
SEC61A1-207ENST00000498837 TMEM14BQ9NUH8 114 aa10.6□□□□□ -0.71
SEC61A1-207ENST00000498837 FKBP11Q9NYL4 201 aa10.6□□□□□ -0.71
SEC61A1-207ENST00000498837 EHFQ9NZC4 300 aa10.6□□□□□ -0.71
SEC61A1-207ENST00000498837 X6R8D5 127 aa10.6□□□□□ -0.71
SEC61A1-207ENST00000498837 M0R2N4 97 aa10.59□□□□□ -0.71
SEC61A1-207ENST00000498837 CD5P06127 495 aa10.59□□□□□ -0.71
SEC61A1-207ENST00000498837 MIFP14174 115 aa10.59□□□□□ -0.71
SEC61A1-207ENST00000498837 PVRIGQ6DKI7 326 aa10.59□□□□□ -0.71
SEC61A1-207ENST00000498837 DHRS11Q6UWP2 260 aa10.59□□□□□ -0.71
SEC61A1-207ENST00000498837 TRPT1Q86TN4 253 aaKnown RBP10.59□□□□□ -0.71
SEC61A1-207ENST00000498837 DUSP18Q8NEJ0 188 aa10.59□□□□□ -0.71
SEC61A1-207ENST00000498837 TSPAN14Q8NG11 270 aa10.59□□□□□ -0.71
SEC61A1-207ENST00000498837 BORCS5Q969J3 196 aa10.59□□□□□ -0.71
SEC61A1-207ENST00000498837 PINX1Q96BK5 328 aaKnown RBP10.59□□□□□ -0.71
SEC61A1-207ENST00000498837 MOB3AQ96BX8 217 aa10.59□□□□□ -0.71
SEC61A1-207ENST00000498837 CNBD2Q96M20 576 aa10.59□□□□□ -0.71
SEC61A1-207ENST00000498837 GINS3Q9BRX5 216 aa10.59□□□□□ -0.71
SEC61A1-207ENST00000498837 ZNF2Q9BSG1 426 aaPredicted RBP10.59□□□□□ -0.71
SEC61A1-207ENST00000498837 RNF126Q9BV68 326 aa10.59□□□□□ -0.71
SEC61A1-207ENST00000498837 KRTAP4-5Q9BYR2 181 aa10.59□□□□□ -0.71
SEC61A1-207ENST00000498837 RABAC1Q9UI14 185 aa10.59□□□□□ -0.71
SEC61A1-207ENST00000498837 NACAE9PAV3 2078 aa10.59□□□□□ -0.71
SEC61A1-207ENST00000498837 ZNF705EA8MWA4 302 aaPredicted RBP10.58□□□□□ -0.72
SEC61A1-207ENST00000498837 C4BPBP20851 252 aa10.58□□□□□ -0.72
SEC61A1-207ENST00000498837 PSMB9P28065 219 aa10.58□□□□□ -0.72
SEC61A1-207ENST00000498837 CBX5P45973 191 aa10.58□□□□□ -0.72
SEC61A1-207ENST00000498837 IDNKQ5T6J7 187 aa10.58□□□□□ -0.72
SEC61A1-207ENST00000498837 UBE2UQ5VVX9 321 aa10.58□□□□□ -0.72
SEC61A1-207ENST00000498837 ZNF767PQ75MW2 155 aa10.58□□□□□ -0.72
SEC61A1-207ENST00000498837 SCRT1Q9BWW7 348 aa10.58□□□□□ -0.72
SEC61A1-207ENST00000498837 RNF167Q9H6Y7 350 aa10.58□□□□□ -0.72
SEC61A1-207ENST00000498837 ZFAND3Q9H8U3 227 aa10.58□□□□□ -0.72
SEC61A1-207ENST00000498837 CLEC5AQ9NY25 188 aa10.58□□□□□ -0.72
SEC61A1-207ENST00000498837 BLOC1S6Q9UL45 172 aa10.58□□□□□ -0.72
SEC61A1-207ENST00000498837 CELA1Q9UNI1 258 aa10.58□□□□□ -0.72
SEC61A1-207ENST00000498837 SSR3Q9UNL2 185 aa10.58□□□□□ -0.72
SEC61A1-207ENST00000498837 PUS1Q9Y606 427 aaKnown RBP eCLIP10.58□□□□□ -0.72
SEC61A1-207ENST00000498837 A0A0A6YYH2 397 aa10.57□□□□□ -0.72
SEC61A1-207ENST00000498837 TRAV2A0A0B4J234 112 aa10.57□□□□□ -0.72
SEC61A1-207ENST00000498837 A6NJ64 397 aa10.57□□□□□ -0.72
SEC61A1-207ENST00000498837 KNCNA6PVL3 124 aa10.57□□□□□ -0.72
SEC61A1-207ENST00000498837 PMP2P02689 132 aa10.57□□□□□ -0.72
SEC61A1-207ENST00000498837 SCAND1P57086 179 aa10.57□□□□□ -0.72
SEC61A1-207ENST00000498837 IZUMO2Q6UXV1 221 aa10.57□□□□□ -0.72
SEC61A1-207ENST00000498837 POM121L12Q8N7R1 296 aa10.57□□□□□ -0.72
SEC61A1-207ENST00000498837 ZNF114Q8NC26 417 aa10.57□□□□□ -0.72
SEC61A1-207ENST00000498837 TSC22D3Q99576 134 aa10.57□□□□□ -0.72
SEC61A1-207ENST00000498837 FXYD6Q9H0Q3 95 aa10.57□□□□□ -0.72
SEC61A1-207ENST00000498837 DIABLOQ9NR28 239 aa10.57□□□□□ -0.72
SEC61A1-207ENST00000498837 DEFB131BA0A096LNP1 70 aa10.56□□□□□ -0.72
SEC61A1-207ENST00000498837 A0A1B0GU03 582 aa10.56□□□□□ -0.72
SEC61A1-207ENST00000498837 K7EQG2 157 aa10.56□□□□□ -0.72
SEC61A1-207ENST00000498837 GPR31O00270 319 aa10.56□□□□□ -0.72
SEC61A1-207ENST00000498837 SPP1P10451 314 aa10.56□□□□□ -0.72
SEC61A1-207ENST00000498837 PRCDQ00LT1 54 aa10.56□□□□□ -0.72
SEC61A1-207ENST00000498837 C12orf74Q32Q52 190 aa10.56□□□□□ -0.72
SEC61A1-207ENST00000498837 MORN3Q6PF18 240 aaPredicted RBP10.56□□□□□ -0.72
SEC61A1-207ENST00000498837 CSNK1G2-AS1Q8NCQ2 148 aa10.56□□□□□ -0.72
SEC61A1-207ENST00000498837 STXBP6Q8NFX7 210 aa10.56□□□□□ -0.72
SEC61A1-207ENST00000498837 SEC22AQ96IW7 307 aa10.56□□□□□ -0.72
SEC61A1-207ENST00000498837 IFT46Q9NQC8 304 aa10.56□□□□□ -0.72
SEC61A1-207ENST00000498837 TMEM50AO95807 157 aa10.55□□□□□ -0.72
SEC61A1-207ENST00000498837 IGKV1-39P01597 117 aa10.55□□□□□ -0.72
SEC61A1-207ENST00000498837 AMBPP02760 352 aa10.55□□□□□ -0.72
SEC61A1-207ENST00000498837 IGKV1D-39P04432 117 aa10.55□□□□□ -0.72
SEC61A1-207ENST00000498837 ZNF688P0C7X2 276 aa10.55□□□□□ -0.72
SEC61A1-207ENST00000498837 PHLDA2Q53GA4 152 aa10.55□□□□□ -0.72
SEC61A1-207ENST00000498837 TMEM41BQ5BJD5 291 aa10.55□□□□□ -0.72
SEC61A1-207ENST00000498837 SPINK9Q5DT21 86 aa10.55□□□□□ -0.72
SEC61A1-207ENST00000498837 ZNF600Q6ZNG1 722 aa10.55□□□□□ -0.72
SEC61A1-207ENST00000498837 CMTM1Q8IZ96 169 aa10.55□□□□□ -0.72
SEC61A1-207ENST00000498837 SPARTQ8N0X7 666 aa10.55□□□□□ -0.72
SEC61A1-207ENST00000498837 CENPSQ8N2Z9 138 aa10.55□□□□□ -0.72
SEC61A1-207ENST00000498837 OR4A16Q8NH70 328 aa10.55□□□□□ -0.72
SEC61A1-207ENST00000498837 VCX3BQ9H321 246 aa10.55□□□□□ -0.72
SEC61A1-207ENST00000498837 TBC1D24Q9ULP9 559 aa10.55□□□□□ -0.72
SEC61A1-207ENST00000498837 P0DMU3 169 aa10.54□□□□□ -0.72
SEC61A1-207ENST00000498837 FAM231AP0DMU4 169 aa10.54□□□□□ -0.72
SEC61A1-207ENST00000498837 FAM231CP0DMU5 169 aa10.54□□□□□ -0.72
SEC61A1-207ENST00000498837 NPPCP23582 126 aa10.54□□□□□ -0.72
SEC61A1-207ENST00000498837 NPBWR1P48145 328 aa10.54□□□□□ -0.72
SEC61A1-207ENST00000498837 HSPA13P48723 471 aa10.54□□□□□ -0.72
SEC61A1-207ENST00000498837 GABARAPL2P60520 117 aa10.54□□□□□ -0.72
SEC61A1-207ENST00000498837 HSPE1P61604 102 aaKnown RBP10.54□□□□□ -0.72
SEC61A1-207ENST00000498837 ACTL10Q5JWF8 245 aa10.54□□□□□ -0.72
SEC61A1-207ENST00000498837 H2BFWTQ7Z2G1 175 aa10.54□□□□□ -0.72
SEC61A1-207ENST00000498837 GRAMD2BQ96HH9 432 aa10.54□□□□□ -0.72
SEC61A1-207ENST00000498837 ANAPC10Q9UM13 185 aa10.54□□□□□ -0.72
SEC61A1-207ENST00000498837 ATP6V1G2O95670 118 aa10.53□□□□□ -0.72
SEC61A1-207ENST00000498837 PPP5CP53041 499 aa10.53□□□□□ -0.72
SEC61A1-207ENST00000498837 ERHP84090 104 aaKnown RBP10.53□□□□□ -0.72
SEC61A1-207ENST00000498837 IZUMO4Q1ZYL8 232 aa10.53□□□□□ -0.72
SEC61A1-207ENST00000498837 OR5H2Q8NGV7 314 aa10.53□□□□□ -0.72
SEC61A1-207ENST00000498837 NDUFAF3Q9BU61 184 aa10.53□□□□□ -0.72
SEC61A1-207ENST00000498837 TMEM231Q9H6L2 316 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms