RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 PDLIM3Q53GG5 364 aaPredicted RBP12.85□□□□□ -0.35
PRKCB-210ENST00000498739 OR52B4Q8NGK2 314 aa12.85□□□□□ -0.35
PRKCB-210ENST00000498739 ZNF502Q8TBZ5 544 aa12.85□□□□□ -0.35
PRKCB-210ENST00000498739 PINX1Q96BK5 328 aaKnown RBP12.85□□□□□ -0.35
PRKCB-210ENST00000498739 HEYLQ9NQ87 328 aaPredicted RBP12.85□□□□□ -0.35
PRKCB-210ENST00000498739 ZC4H2Q9NQZ6 224 aa12.85□□□□□ -0.35
PRKCB-210ENST00000498739 CACFD1Q9UGQ2 172 aa12.85□□□□□ -0.35
PRKCB-210ENST00000498739 K7EIM0 57 aa12.84□□□□□ -0.35
PRKCB-210ENST00000498739 GGCTO75223 188 aaKnown RBP12.84□□□□□ -0.35
PRKCB-210ENST00000498739 CLEC3BP05452 202 aa12.84□□□□□ -0.35
PRKCB-210ENST00000498739 H2AFB2P0C5Z0 115 aa12.84□□□□□ -0.35
PRKCB-210ENST00000498739 RNASE2P10153 161 aaKnown RBP12.84□□□□□ -0.35
PRKCB-210ENST00000498739 SUB1P53999 127 aaKnown RBP eCLIP12.84□□□□□ -0.352e-6■■□□□ 12.6
PRKCB-210ENST00000498739 TNFRSF9Q07011 255 aa12.84□□□□□ -0.35
PRKCB-210ENST00000498739 GGNBP1Q5YKI7 109 aa12.84□□□□□ -0.35
PRKCB-210ENST00000498739 ACSM6Q6P461 480 aa12.84□□□□□ -0.35
PRKCB-210ENST00000498739 ENKURQ8TC29 256 aa12.84□□□□□ -0.35
PRKCB-210ENST00000498739 SCARB1Q8WTV0 552 aa12.84□□□□□ -0.35
PRKCB-210ENST00000498739 C21orf62Q9NYP8 219 aa12.84□□□□□ -0.35
PRKCB-210ENST00000498739 HSPB7Q9UBY9 170 aa12.84□□□□□ -0.35
PRKCB-210ENST00000498739 ADAP1O75689 374 aa12.83□□□□□ -0.36
PRKCB-210ENST00000498739 OR2C1O95371 312 aa12.83□□□□□ -0.36
PRKCB-210ENST00000498739 MT-CO2P00403 227 aa12.83□□□□□ -0.36
PRKCB-210ENST00000498739 PRB2P02812 416 aaPredicted RBP12.83□□□□□ -0.36
PRKCB-210ENST00000498739 UBAC2Q8NBM4 344 aa12.83□□□□□ -0.36
PRKCB-210ENST00000498739 OR9G4Q8NGQ1 327 aa12.83□□□□□ -0.36
PRKCB-210ENST00000498739 ELOVL1Q9BW60 279 aa12.83□□□□□ -0.36
PRKCB-210ENST00000498739 HIPK2Q9H2X6 1198 aa12.83□□□□□ -0.36
PRKCB-210ENST00000498739 RBKSQ9H477 322 aa12.83□□□□□ -0.36
PRKCB-210ENST00000498739 OR2T8A6NH00 312 aa12.82□□□□□ -0.36
PRKCB-210ENST00000498739 I3L2K1 104 aa12.82□□□□□ -0.36
PRKCB-210ENST00000498739 PITX3O75364 302 aa12.82□□□□□ -0.36
PRKCB-210ENST00000498739 SLC25A6P12236 298 aa12.82□□□□□ -0.36
PRKCB-210ENST00000498739 HTR2BP41595 481 aa12.82□□□□□ -0.36
PRKCB-210ENST00000498739 INSL3P51460 131 aa12.82□□□□□ -0.36
PRKCB-210ENST00000498739 Q56UQ5 140 aa12.82□□□□□ -0.36
PRKCB-210ENST00000498739 C11orf87Q6NUJ2 197 aa12.82□□□□□ -0.36
PRKCB-210ENST00000498739 PLET1Q6UQ28 207 aa12.82□□□□□ -0.36
PRKCB-210ENST00000498739 DTD1Q8TEA8 209 aa12.82□□□□□ -0.36
PRKCB-210ENST00000498739 OR4C12Q96R67 309 aa12.82□□□□□ -0.36
PRKCB-210ENST00000498739 SEC22CQ9BRL7 303 aa12.82□□□□□ -0.36
PRKCB-210ENST00000498739 CORTO00230 105 aa12.81□□□□□ -0.36
PRKCB-210ENST00000498739 TGOLN2O43493 480 aa12.81□□□□□ -0.36
PRKCB-210ENST00000498739 WIPF1O43516 503 aa12.81□□□□□ -0.36
PRKCB-210ENST00000498739 IFNA21P01568 189 aa12.81□□□□□ -0.36
PRKCB-210ENST00000498739 IGHV3-48P01763 117 aa12.81□□□□□ -0.36
PRKCB-210ENST00000498739 DEFA1P59665 94 aa12.81□□□□□ -0.36
PRKCB-210ENST00000498739 DEFA3P59666 94 aa12.81□□□□□ -0.36
PRKCB-210ENST00000498739 KRTAP10-11P60412 298 aa12.81□□□□□ -0.36
PRKCB-210ENST00000498739 EGFEM1PQ0D2K5 195 aa12.81□□□□□ -0.36
PRKCB-210ENST00000498739 BSXQ3C1V8 233 aa12.81□□□□□ -0.36
PRKCB-210ENST00000498739 SLC24A4Q8NFF2 622 aa12.81□□□□□ -0.36
PRKCB-210ENST00000498739 MITD1Q8WV92 249 aa12.81□□□□□ -0.36
PRKCB-210ENST00000498739 PEMTQ9UBM1 199 aa12.81□□□□□ -0.36
PRKCB-210ENST00000498739 MFAP4P55083 255 aa12.8□□□□□ -0.36
PRKCB-210ENST00000498739 PVRIGQ6DKI7 326 aa12.8□□□□□ -0.36
PRKCB-210ENST00000498739 NRARPQ7Z6K4 114 aa12.8□□□□□ -0.36
PRKCB-210ENST00000498739 ZNF431Q8TF32 576 aaPredicted RBP12.8□□□□□ -0.36
PRKCB-210ENST00000498739 BSCL2Q96G97 398 aaPredicted RBP12.8□□□□□ -0.36
PRKCB-210ENST00000498739 ATP6V0BQ99437 205 aa12.8□□□□□ -0.36
PRKCB-210ENST00000498739 AURKAIP1Q9NWT8 199 aaPredicted RBP12.8□□□□□ -0.36
PRKCB-210ENST00000498739 IGHV3-35A0A0C4DH35 117 aa12.79□□□□□ -0.36
PRKCB-210ENST00000498739 MPTX1A8MV57 137 aa12.79□□□□□ -0.36
PRKCB-210ENST00000498739 FAM90A26D6RGX4 464 aa12.79□□□□□ -0.36
PRKCB-210ENST00000498739 F8W735 103 aaPredicted RBP12.79□□□□□ -0.36
PRKCB-210ENST00000498739 IFNA10P01566 189 aa12.79□□□□□ -0.36
PRKCB-210ENST00000498739 NPY1RP25929 384 aa12.79□□□□□ -0.36
PRKCB-210ENST00000498739 OPRK1P41145 380 aa12.79□□□□□ -0.36
PRKCB-210ENST00000498739 FAM106AQ4KMX7 169 aa12.79□□□□□ -0.36
PRKCB-210ENST00000498739 C2orf83Q53S99 150 aa12.79□□□□□ -0.36
PRKCB-210ENST00000498739 GPHB5Q86YW7 130 aa12.79□□□□□ -0.36
PRKCB-210ENST00000498739 UXS1Q8NBZ7 420 aa12.79□□□□□ -0.36
PRKCB-210ENST00000498739 GAR1Q9NY12 217 aaKnown RBP12.79□□□□□ -0.36
PRKCB-210ENST00000498739 ZMAT5Q9UDW3 170 aaKnown RBP12.79□□□□□ -0.36
PRKCB-210ENST00000498739 ZNF320A2RRD8 509 aa12.78□□□□□ -0.36
PRKCB-210ENST00000498739 IAPPP10997 89 aa12.78□□□□□ -0.36
PRKCB-210ENST00000498739 SPSB3Q6PJ21 355 aa12.78□□□□□ -0.36
PRKCB-210ENST00000498739 IL34Q6ZMJ4 242 aa12.78□□□□□ -0.36
PRKCB-210ENST00000498739 REC114Q7Z4M0 266 aa12.78□□□□□ -0.36
PRKCB-210ENST00000498739 HAPLN4Q86UW8 402 aa12.78□□□□□ -0.36
PRKCB-210ENST00000498739 DUSP18Q8NEJ0 188 aa12.78□□□□□ -0.36
PRKCB-210ENST00000498739 TXN2Q99757 166 aa12.78□□□□□ -0.36
PRKCB-210ENST00000498739 CHRDL1Q9BU40 450 aa12.78□□□□□ -0.36
PRKCB-210ENST00000498739 MAGT1Q9H0U3 335 aa12.78□□□□□ -0.36
PRKCB-210ENST00000498739 LGALS9O00182 355 aa12.77□□□□□ -0.37
PRKCB-210ENST00000498739 NUPL2O15504 423 aaKnown RBP12.77□□□□□ -0.37
PRKCB-210ENST00000498739 GNG7O60262 68 aa12.77□□□□□ -0.37
PRKCB-210ENST00000498739 MED6O75586 246 aa12.77□□□□□ -0.37
PRKCB-210ENST00000498739 CSN3P07498 182 aa12.77□□□□□ -0.37
PRKCB-210ENST00000498739 FCGR2BP31994 310 aaPredicted RBP12.77□□□□□ -0.37
PRKCB-210ENST00000498739 NOXA1Q86UR1 476 aa12.77□□□□□ -0.37
PRKCB-210ENST00000498739 C12orf45Q8N5I9 185 aaPredicted RBP12.77□□□□□ -0.37
PRKCB-210ENST00000498739 TMEM170AQ8WVE7 144 aa12.77□□□□□ -0.37
PRKCB-210ENST00000498739 FNDC4Q9H6D8 234 aaPredicted RBP12.77□□□□□ -0.37
PRKCB-210ENST00000498739 U3KQ87 197 aa12.77□□□□□ -0.37
PRKCB-210ENST00000498739 MEGF8Q7Z7M0 2845 aa12.76□□□□□ -0.37
PRKCB-210ENST00000498739 RPS10-NUDT3A0A1W2PQS6 291 aa12.76□□□□□ -0.37
PRKCB-210ENST00000498739 CCSO14618 274 aa12.76□□□□□ -0.37
PRKCB-210ENST00000498739 SYNGR2O43760 224 aa12.76□□□□□ -0.37
PRKCB-210ENST00000498739 IL5P05113 134 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms