RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 SH2D6Q7Z4S9 175 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 OR1F12Q8NHA8 337 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 PIGTQ969N2 578 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 HS3ST6Q96QI5 342 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 SRXN1Q9BYN0 137 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 MBNL3Q9NUK0 354 aaKnown RBP4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 R4GMQ9 66 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 PRR14LQ5THK1 2151 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 TRAV9-2A0A087WT02 112 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 C2orf70A6NJV1 201 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 ZNF850A8MQ14 1090 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 MRPL33O75394 65 aaKnown RBP4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 HBE1P02100 147 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 FXYD3Q14802 87 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 VWC2Q2TAL6 325 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 CR1LQ2VPA4 569 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 CEACAM16Q2WEN9 425 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 SLC25A53Q5H9E4 307 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 C2orf91Q6ZV80 131 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 FAM214BQ7L5A3 538 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 URB1-AS1Q96HZ7 61 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 KCNS1Q96KK3 526 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 PBOV1Q9GZY1 135 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 NECAP2Q9NVZ3 263 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 TECRQ9NZ01 308 aaKnown RBP4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 FLNCQ14315 2725 aa4.8□□□□□ -1.64
SOX2-OT-218ENST00000498731 GAGE12HA6NDE8 117 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 BMPR1BO00238 502 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 CGAP01215 116 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 RPS20P60866 119 aaKnown RBP4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 LCN2P80188 198 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 ROM1Q03395 351 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 ABCA11PQ4W5N1 156 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 FAM58AQ8N1B3 248 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 QTRT1Q9BXR0 403 aaKnown RBP4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 FAM206AQ9NX38 181 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 CLCF1Q9UBD9 225 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 UBE2L5PA0A1B0GUS4 154 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 VWC2LB2RUY7 222 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 TSPAN13O95857 204 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 KRASP01116 189 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 MEOX1P50221 254 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 PLP1P60201 277 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 ZNF90Q03938 601 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 HSD52Q0P140 79 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 HIST3H3Q16695 136 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 SLC35E4Q6ICL7 350 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 KCNIP4Q6PIL6 250 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 SMIM20Q8N5G0 67 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 CNEP1R1Q8N9A8 125 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 DUX5Q96PT3 197 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 OR4C12Q96R67 309 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 P2RX4Q99571 388 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 WDR61Q9GZS3 305 aaKnown RBP4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 OR10A2Q9H208 303 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 ANXA10Q9UJ72 324 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 ARL2-SNX15V9GYD0 113 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 IGKV1D-13A0A0B4J2D9 117 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 TOX4O94842 621 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 S1PR2O95136 353 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 IGKV1-13P0DP09 117 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 MSR1P21757 451 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 SRD5A2P31213 254 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 MRPL54Q6P161 138 aaKnown RBP4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 ZNF525Q8N782 197 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 SCCPDHQ8NBX0 429 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 OR1L1Q8NH94 360 aa4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 GNPNAT1Q96EK6 184 aaPredicted RBP4.79□□□□□ -1.64
SOX2-OT-218ENST00000498731 USF3Q68DE3 2245 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 DOPEY2Q9Y3R5 2298 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 TRBV7-9A0A0J9YWB2 115 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 SCO2A0A1W2PP80 73 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 TMEM89A2RUT3 159 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 FAM181BA6NEQ2 426 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 M0R1X1 148 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 CLDN1O95832 211 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 PRDX2P32119 198 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 TFF3Q07654 80 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 Q0VG73 95 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 FOXL1Q12952 345 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 EIF3IQ13347 325 aaKnown RBP4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 ZNF324BQ6AW86 544 aaPredicted RBP4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 APOBEC3DQ96AK3 386 aaPredicted RBP4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 OR2V2Q96R30 315 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 PLEKHJ1Q9NW61 149 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 CDC42EP3Q9UKI2 254 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 OR51B2Q9Y5P1 312 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 TRAV38-1A0A0B4J264 116 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 C3orf85A0A1B0GTC6 90 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 TEX22C9J3V5 150 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 C11orf94C9JXX5 98 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 WFDC2Q14508 124 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 FAM120AOSQ5T036 256 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 GDF5OSQ5U4N7 250 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 ZNF818PQ6ZRF7 136 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 TBC1D26Q86UD7 250 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 TMEM251Q8N6I4 163 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 TEX45Q8NA69 505 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 OR8B12Q8NGG6 310 aa4.78□□□□□ -1.64
SOX2-OT-218ENST00000498731 PIGCQ92535 297 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms