RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 NAT1P18440 290 aa11.75□□□□□ -0.53
MUC1-220ENST00000498431 RCVRNP35243 200 aa11.75□□□□□ -0.53
MUC1-220ENST00000498431 MSMO1Q15800 293 aa11.75□□□□□ -0.53
MUC1-220ENST00000498431 SPSB3Q6PJ21 355 aa11.75□□□□□ -0.53
MUC1-220ENST00000498431 UBAC2Q8NBM4 344 aa11.75□□□□□ -0.53
MUC1-220ENST00000498431 DMBX1Q8NFW5 382 aa11.75□□□□□ -0.53
MUC1-220ENST00000498431 OR51H1Q8NH63 302 aa11.75□□□□□ -0.53
MUC1-220ENST00000498431 C2CD4CQ8TF44 421 aa11.75□□□□□ -0.53
MUC1-220ENST00000498431 SCARB1Q8WTV0 552 aa11.75□□□□□ -0.53
MUC1-220ENST00000498431 SMIM4Q8WVI0 70 aa11.75□□□□□ -0.53
MUC1-220ENST00000498431 SLC5A7Q9GZV3 580 aa11.75□□□□□ -0.53
MUC1-220ENST00000498431 MFFQ9GZY8 342 aa11.75□□□□□ -0.53
MUC1-220ENST00000498431 C21orf62Q9NYP8 219 aa11.75□□□□□ -0.53
MUC1-220ENST00000498431 MTFP1Q9UDX5 166 aa11.75□□□□□ -0.53
MUC1-220ENST00000498431 K7EIM0 57 aa11.74□□□□□ -0.53
MUC1-220ENST00000498431 FXYD4P59646 89 aa11.74□□□□□ -0.53
MUC1-220ENST00000498431 ARPC4P59998 168 aa11.74□□□□□ -0.53
MUC1-220ENST00000498431 SSBP1Q04837 148 aaKnown RBP11.74□□□□□ -0.53
MUC1-220ENST00000498431 ZNF79Q15937 498 aa11.74□□□□□ -0.53
MUC1-220ENST00000498431 ZNF818PQ6ZRF7 136 aa11.74□□□□□ -0.53
MUC1-220ENST00000498431 S100ZQ8WXG8 99 aa11.74□□□□□ -0.53
MUC1-220ENST00000498431 RHPN1-AS1Q9BWJ2 59 aa11.74□□□□□ -0.53
MUC1-220ENST00000498431 APLNQ9ULZ1 77 aa11.74□□□□□ -0.53
MUC1-220ENST00000498431 F11RQ9Y624 299 aaKnown RBP11.74□□□□□ -0.53
MUC1-220ENST00000498431 PKD1P98161 4303 aa11.74□□□□□ -0.53
MUC1-220ENST00000498431 IGHV7-4-1A0A0J9YVY3 117 aa11.73□□□□□ -0.53
MUC1-220ENST00000498431 C15orf62A8K5M9 175 aa11.73□□□□□ -0.53
MUC1-220ENST00000498431 CHEK1O14757 476 aa11.73□□□□□ -0.53
MUC1-220ENST00000498431 CTSGP08311 255 aa11.73□□□□□ -0.53
MUC1-220ENST00000498431 TAS2R46P59540 309 aa11.73□□□□□ -0.53
MUC1-220ENST00000498431 CATR1Q13166 79 aa11.73□□□□□ -0.53
MUC1-220ENST00000498431 Q56UQ5 140 aa11.73□□□□□ -0.53
MUC1-220ENST00000498431 ZBTB34Q8NCN2 500 aa11.73□□□□□ -0.53
MUC1-220ENST00000498431 OR5AP2Q8NGF4 316 aa11.73□□□□□ -0.53
MUC1-220ENST00000498431 HINT2Q9BX68 163 aa11.73□□□□□ -0.53
MUC1-220ENST00000498431 SRRQ9GZT4 340 aa11.73□□□□□ -0.53
MUC1-220ENST00000498431 PLEKHA2Q9HB19 425 aa11.73□□□□□ -0.53
MUC1-220ENST00000498431 NDUFA4L2Q9NRX3 87 aa11.73□□□□□ -0.53
MUC1-220ENST00000498431 KLK11Q9UBX7 282 aa11.73□□□□□ -0.53
MUC1-220ENST00000498431 IGHV3OR16-13A0A075B7E8 117 aa11.72□□□□□ -0.53
MUC1-220ENST00000498431 IGHV3-74A0A0B4J1X5 117 aa11.72□□□□□ -0.53
MUC1-220ENST00000498431 IGLL5B9A064 214 aa11.72□□□□□ -0.53
MUC1-220ENST00000498431 CYB5BO43169 146 aa11.72□□□□□ -0.53
MUC1-220ENST00000498431 FGF2P09038 288 aa11.72□□□□□ -0.53
MUC1-220ENST00000498431 HLA-DMAP28067 261 aa11.72□□□□□ -0.53
MUC1-220ENST00000498431 THOC7Q6I9Y2 204 aaKnown RBP11.72□□□□□ -0.53
MUC1-220ENST00000498431 LYSMD2Q8IV50 215 aa11.72□□□□□ -0.53
MUC1-220ENST00000498431 GBGT1Q8N5D6 347 aa11.72□□□□□ -0.53
MUC1-220ENST00000498431 TMEM116Q8NCL8 245 aa11.72□□□□□ -0.53
MUC1-220ENST00000498431 OR1L8Q8NGR8 309 aa11.72□□□□□ -0.53
MUC1-220ENST00000498431 OR5H2Q8NGV7 314 aa11.72□□□□□ -0.53
MUC1-220ENST00000498431 ATP6V0BQ99437 205 aa11.72□□□□□ -0.53
MUC1-220ENST00000498431 NSG2Q9Y328 171 aa11.72□□□□□ -0.53
MUC1-220ENST00000498431 ABCA13Q86UQ4 5058 aa11.72□□□□□ -0.53
MUC1-220ENST00000498431 DNAH11Q96DT5 4516 aa11.72□□□□□ -0.53
MUC1-220ENST00000498431 CA1P00915 261 aaPredicted RBP11.71□□□□□ -0.53
MUC1-220ENST00000498431 AADACL3Q5VUY0 350 aa11.71□□□□□ -0.53
MUC1-220ENST00000498431 FAM90A2PQ658T7 463 aa11.71□□□□□ -0.53
MUC1-220ENST00000498431 TMEM17Q86X19 198 aa11.71□□□□□ -0.53
MUC1-220ENST00000498431 TMEM229BQ8NBD8 167 aa11.71□□□□□ -0.53
MUC1-220ENST00000498431 COMMD9Q9P000 198 aa11.71□□□□□ -0.53
MUC1-220ENST00000498431 MARCH11A6NNE9 402 aa11.7□□□□□ -0.54
MUC1-220ENST00000498431 PMP2P02689 132 aa11.7□□□□□ -0.54
MUC1-220ENST00000498431 TBPP20226 339 aa11.7□□□□□ -0.54
MUC1-220ENST00000498431 TCTAP57738 103 aa11.7□□□□□ -0.54
MUC1-220ENST00000498431 TAS2R19P59542 299 aa11.7□□□□□ -0.54
MUC1-220ENST00000498431 ZNF846Q147U1 533 aa11.7□□□□□ -0.54
MUC1-220ENST00000498431 HSD17B13Q7Z5P4 300 aaPredicted RBP11.7□□□□□ -0.54
MUC1-220ENST00000498431 LSM10Q969L4 123 aaKnown RBP11.7□□□□□ -0.54
MUC1-220ENST00000498431 OR10C1Q96KK4 312 aa11.7□□□□□ -0.54
MUC1-220ENST00000498431 WDR12Q9GZL7 423 aaKnown RBP11.7□□□□□ -0.54
MUC1-220ENST00000498431 EHFQ9NZC4 300 aa11.7□□□□□ -0.54
MUC1-220ENST00000498431 A0A1B0GVY2 172 aa11.69□□□□□ -0.54
MUC1-220ENST00000498431 DBX1A6NMT0 343 aa11.69□□□□□ -0.54
MUC1-220ENST00000498431 YIF1AO95070 293 aa11.69□□□□□ -0.54
MUC1-220ENST00000498431 CD3DP04234 171 aa11.69□□□□□ -0.54
MUC1-220ENST00000498431 GNRHRP30968 328 aa11.69□□□□□ -0.54
MUC1-220ENST00000498431 HRH1P35367 487 aa11.69□□□□□ -0.54
MUC1-220ENST00000498431 RFX2P48378 723 aa11.69□□□□□ -0.54
MUC1-220ENST00000498431 TMEM187Q14656 261 aa11.69□□□□□ -0.54
MUC1-220ENST00000498431 RNASE10Q5GAN6 216 aaKnown RBP11.69□□□□□ -0.54
MUC1-220ENST00000498431 Q8NAQ8 132 aa11.69□□□□□ -0.54
MUC1-220ENST00000498431 TRIM63Q969Q1 353 aa11.69□□□□□ -0.54
MUC1-220ENST00000498431 OR51B2Q9Y5P1 312 aa11.69□□□□□ -0.54
MUC1-220ENST00000498431 ANKRD20A5PA0PJZ0 165 aa11.68□□□□□ -0.54
MUC1-220ENST00000498431 M0QYG6 137 aa11.68□□□□□ -0.54
MUC1-220ENST00000498431 NUPL2O15504 423 aaKnown RBP11.68□□□□□ -0.54
MUC1-220ENST00000498431 RAB3DO95716 219 aa11.68□□□□□ -0.54
MUC1-220ENST00000498431 KRASP01116 189 aa11.68□□□□□ -0.54
MUC1-220ENST00000498431 IGHV3-48P01763 117 aa11.68□□□□□ -0.54
MUC1-220ENST00000498431 CD74P04233 296 aa11.68□□□□□ -0.54
MUC1-220ENST00000498431 RLN1P04808 185 aa11.68□□□□□ -0.54
MUC1-220ENST00000498431 RBMY1A1P0DJD3 496 aaKnown RBP11.68□□□□□ -0.54
MUC1-220ENST00000498431 RBMY1CP0DJD4 496 aa11.68□□□□□ -0.54
MUC1-220ENST00000498431 G6PCP35575 357 aa11.68□□□□□ -0.54
MUC1-220ENST00000498431 INPP1P49441 399 aa11.68□□□□□ -0.54
MUC1-220ENST00000498431 PPP5CP53041 499 aa11.68□□□□□ -0.54
MUC1-220ENST00000498431 CMC4P56277 68 aaPredicted RBP11.68□□□□□ -0.54
MUC1-220ENST00000498431 AP3S2P59780 193 aa11.68□□□□□ -0.54
MUC1-220ENST00000498431 ERVK-16P61578 105 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms