RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 MT-CO2P00403 227 aa6.34□□□□□ -1.39
HMGXB4-207ENST00000498212 IGKV1-5P01602 117 aa6.34□□□□□ -1.39
HMGXB4-207ENST00000498212 CTSGP08311 255 aa6.34□□□□□ -1.39
HMGXB4-207ENST00000498212 ADMP35318 185 aa6.34□□□□□ -1.39
HMGXB4-207ENST00000498212 TMBIM6P55061 237 aa6.34□□□□□ -1.39
HMGXB4-207ENST00000498212 MFAP4P55083 255 aa6.34□□□□□ -1.39
HMGXB4-207ENST00000498212 RELQ04864 619 aaPredicted RBP6.34□□□□□ -1.39
HMGXB4-207ENST00000498212 IL18Q14116 193 aa6.34□□□□□ -1.39
HMGXB4-207ENST00000498212 MEF2DQ14814 521 aa6.34□□□□□ -1.39
HMGXB4-207ENST00000498212 SPINK9Q5DT21 86 aa6.34□□□□□ -1.39
HMGXB4-207ENST00000498212 ZFAND6Q6FIF0 208 aa6.34□□□□□ -1.39
HMGXB4-207ENST00000498212 LAMTOR1Q6IAA8 161 aa6.34□□□□□ -1.39
HMGXB4-207ENST00000498212 FAAP20Q6NZ36 180 aa6.34□□□□□ -1.39
HMGXB4-207ENST00000498212 SLC35G3Q8N808 338 aa6.34□□□□□ -1.39
HMGXB4-207ENST00000498212 OR13C8Q8NGS7 320 aa6.34□□□□□ -1.39
HMGXB4-207ENST00000498212 MARCH1Q8TCQ1 289 aa6.34□□□□□ -1.39
HMGXB4-207ENST00000498212 DYNC2LI1Q8TCX1 351 aa6.34□□□□□ -1.39
HMGXB4-207ENST00000498212 SMIM4Q8WVI0 70 aa6.34□□□□□ -1.39
HMGXB4-207ENST00000498212 PINX1Q96BK5 328 aaKnown RBP6.34□□□□□ -1.39
HMGXB4-207ENST00000498212 DIRAS2Q96HU8 199 aa6.34□□□□□ -1.39
HMGXB4-207ENST00000498212 TXN2Q99757 166 aa6.34□□□□□ -1.39
HMGXB4-207ENST00000498212 SPAG8Q99932 426 aaPredicted RBP6.34□□□□□ -1.39
HMGXB4-207ENST00000498212 FAM110AQ9BQ89 295 aa6.34□□□□□ -1.39
HMGXB4-207ENST00000498212 BCL7BQ9BQE9 202 aa6.34□□□□□ -1.39
HMGXB4-207ENST00000498212 PDCD10Q9BUL8 212 aa6.34□□□□□ -1.39
HMGXB4-207ENST00000498212 CCDC59Q9P031 241 aaKnown RBP6.34□□□□□ -1.39
HMGXB4-207ENST00000498212 LOC102724200A0A096LPH7 203 aaPredicted RBP6.33□□□□□ -1.4
HMGXB4-207ENST00000498212 C15orf62A8K5M9 175 aa6.33□□□□□ -1.4
HMGXB4-207ENST00000498212 DISC1C4P0D8 188 aa6.33□□□□□ -1.4
HMGXB4-207ENST00000498212 INS-IGF2F8WCM5 200 aa6.33□□□□□ -1.4
HMGXB4-207ENST00000498212 TSPAN4O14817 238 aa6.33□□□□□ -1.4
HMGXB4-207ENST00000498212 CTDSPLO15194 276 aa6.33□□□□□ -1.4
HMGXB4-207ENST00000498212 ST8SIA3O43173 380 aa6.33□□□□□ -1.4
HMGXB4-207ENST00000498212 ZNF207O43670 478 aaKnown RBP6.33□□□□□ -1.4
HMGXB4-207ENST00000498212 GNG7O60262 68 aa6.33□□□□□ -1.4
HMGXB4-207ENST00000498212 NOL3O60936 208 aaKnown RBP6.33□□□□□ -1.4
HMGXB4-207ENST00000498212 IFNA17P01571 189 aa6.33□□□□□ -1.4
HMGXB4-207ENST00000498212 CTSDP07339 412 aaPredicted RBP6.33□□□□□ -1.4
HMGXB4-207ENST00000498212 P0C879 139 aa6.33□□□□□ -1.4
HMGXB4-207ENST00000498212 UCP1P25874 307 aa6.33□□□□□ -1.4
HMGXB4-207ENST00000498212 FCGR2BP31994 310 aaPredicted RBP6.33□□□□□ -1.4
HMGXB4-207ENST00000498212 SNCAP37840 140 aa6.33□□□□□ -1.4
HMGXB4-207ENST00000498212 SP6Q3SY56 376 aa6.33□□□□□ -1.4
HMGXB4-207ENST00000498212 XP32Q5T750 250 aa6.33□□□□□ -1.4
HMGXB4-207ENST00000498212 RNASE11Q8TAA1 199 aaKnown RBP6.33□□□□□ -1.4
HMGXB4-207ENST00000498212 RRNAD1Q96FB5 475 aaKnown RBP6.33□□□□□ -1.4
HMGXB4-207ENST00000498212 GGTLC1Q9BX51 225 aa6.33□□□□□ -1.4
HMGXB4-207ENST00000498212 NXF2Q9GZY0 626 aaKnown RBP6.33□□□□□ -1.4
HMGXB4-207ENST00000498212 RABL2AQ9UBK7 228 aaPredicted RBP6.33□□□□□ -1.4
HMGXB4-207ENST00000498212 RABL2BQ9UNT1 228 aa6.33□□□□□ -1.4
HMGXB4-207ENST00000498212 C14orf166Q9Y224 244 aaKnown RBP6.33□□□□□ -1.4
HMGXB4-207ENST00000498212 TENM3Q9P273 2699 aa6.33□□□□□ -1.4
HMGXB4-207ENST00000498212 A0A0B4J293 547 aa6.32□□□□□ -1.4
HMGXB4-207ENST00000498212 TEX13DA0A0J9YY54 714 aaPredicted RBP6.32□□□□□ -1.4
HMGXB4-207ENST00000498212 CORTO00230 105 aa6.32□□□□□ -1.4
HMGXB4-207ENST00000498212 YIF1AO95070 293 aa6.32□□□□□ -1.4
HMGXB4-207ENST00000498212 IGHV3-48P01763 117 aa6.32□□□□□ -1.4
HMGXB4-207ENST00000498212 OR5AC1P0C628 307 aa6.32□□□□□ -1.4
HMGXB4-207ENST00000498212 AKAIN1P0CW23 69 aa6.32□□□□□ -1.4
HMGXB4-207ENST00000498212 NPBWR1P48145 328 aa6.32□□□□□ -1.4
HMGXB4-207ENST00000498212 HOXA1P49639 335 aaPredicted RBP6.32□□□□□ -1.4
HMGXB4-207ENST00000498212 SUB1P53999 127 aaKnown RBP eCLIP6.32□□□□□ -1.4
HMGXB4-207ENST00000498212 SURF2Q15527 256 aaPredicted RBP6.32□□□□□ -1.4
HMGXB4-207ENST00000498212 FAM219AQ8IW50 185 aa6.32□□□□□ -1.4
HMGXB4-207ENST00000498212 DUSP18Q8NEJ0 188 aa6.32□□□□□ -1.4
HMGXB4-207ENST00000498212 OR4C16Q8NGL9 310 aa6.32□□□□□ -1.4
HMGXB4-207ENST00000498212 ZNF414Q96IQ9 312 aa6.32□□□□□ -1.4
HMGXB4-207ENST00000498212 OR10C1Q96KK4 312 aa6.32□□□□□ -1.4
HMGXB4-207ENST00000498212 RTBDNQ9BSG5 229 aaPredicted RBP6.32□□□□□ -1.4
HMGXB4-207ENST00000498212 C6orf62Q9GZU0 229 aaPredicted RBP6.32□□□□□ -1.4
HMGXB4-207ENST00000498212 ENY2Q9NPA8 101 aa6.32□□□□□ -1.4
HMGXB4-207ENST00000498212 UBQLN2Q9UHD9 624 aa6.32□□□□□ -1.4
HMGXB4-207ENST00000498212 SMPXQ9UHP9 88 aa6.32□□□□□ -1.4
HMGXB4-207ENST00000498212 STAB2Q8WWQ8 2551 aa6.31□□□□□ -1.4
HMGXB4-207ENST00000498212 TRAV14DV4A0A0A6YYC5 116 aa6.31□□□□□ -1.4
HMGXB4-207ENST00000498212 A0A0G2JRQ6 117 aa6.31□□□□□ -1.4
HMGXB4-207ENST00000498212 IGHV7-4-1A0A0J9YVY3 117 aa6.31□□□□□ -1.4
HMGXB4-207ENST00000498212 OR4C46A6NHA9 309 aa6.31□□□□□ -1.4
HMGXB4-207ENST00000498212 CHEK1O14757 476 aa6.31□□□□□ -1.4
HMGXB4-207ENST00000498212 GSTZ1O43708 216 aaPredicted RBP6.31□□□□□ -1.4
HMGXB4-207ENST00000498212 CDS2O95674 445 aa6.31□□□□□ -1.4
HMGXB4-207ENST00000498212 RNASE2P10153 161 aaKnown RBP6.31□□□□□ -1.4
HMGXB4-207ENST00000498212 ETV6P41212 452 aa6.31□□□□□ -1.4
HMGXB4-207ENST00000498212 RPL5P46777 297 aaKnown RBP6.31□□□□□ -1.4
HMGXB4-207ENST00000498212 DHODHQ02127 395 aa6.31□□□□□ -1.4
HMGXB4-207ENST00000498212 TMEM116Q8NCL8 245 aa6.31□□□□□ -1.4
HMGXB4-207ENST00000498212 IL17DQ8TAD2 202 aa6.31□□□□□ -1.4
HMGXB4-207ENST00000498212 GLYATL2Q8WU03 294 aa6.31□□□□□ -1.4
HMGXB4-207ENST00000498212 RBPMSQ93062 196 aaKnown RBP6.31□□□□□ -1.4
HMGXB4-207ENST00000498212 RNF2Q99496 336 aa6.31□□□□□ -1.4
HMGXB4-207ENST00000498212 PRRT1Q99946 306 aa6.31□□□□□ -1.4
HMGXB4-207ENST00000498212 GINS3Q9BRX5 216 aa6.31□□□□□ -1.4
HMGXB4-207ENST00000498212 RHPN1-AS1Q9BWJ2 59 aa6.31□□□□□ -1.4
HMGXB4-207ENST00000498212 SLIRPQ9GZT3 109 aaKnown RBP6.31□□□□□ -1.4
HMGXB4-207ENST00000498212 TMEM222Q9H0R3 208 aa6.31□□□□□ -1.4
HMGXB4-207ENST00000498212 NAA60Q9H7X0 242 aa6.31□□□□□ -1.4
HMGXB4-207ENST00000498212 RSL24D1Q9UHA3 163 aaKnown RBP6.31□□□□□ -1.4
HMGXB4-207ENST00000498212 GPR132Q9UNW8 380 aa6.31□□□□□ -1.4
HMGXB4-207ENST00000498212 RYR3Q15413 4870 aa6.3□□□□□ -1.4
HMGXB4-207ENST00000498212 IGHV3-49A0A0A0MS15 119 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms