RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 ZNF431Q8TF32 576 aaPredicted RBP13.93□□□□□ -0.18
PRKCB-209ENST00000498058 RBPMSQ93062 196 aaKnown RBP13.93□□□□□ -0.18
PRKCB-209ENST00000498058 TMEM56Q96MV1 263 aa13.93□□□□□ -0.18
PRKCB-209ENST00000498058 FYTTD1Q96QD9 318 aaKnown RBP13.93□□□□□ -0.18
PRKCB-209ENST00000498058 OR2A7Q96R45 310 aa13.93□□□□□ -0.18
PRKCB-209ENST00000498058 TMEM56-RWDD3S4R434 201 aa13.93□□□□□ -0.18
PRKCB-209ENST00000498058 ALMS1Q8TCU4 4167 aa13.93□□□□□ -0.18
PRKCB-209ENST00000498058 DUXBA0A1W2PPF3 345 aa13.92□□□□□ -0.18
PRKCB-209ENST00000498058 MARCH11A6NNE9 402 aa13.92□□□□□ -0.18
PRKCB-209ENST00000498058 NPIPB5A8MRT5 1133 aa13.92□□□□□ -0.18
PRKCB-209ENST00000498058 SNRPGP15A8MWD9 76 aa13.92□□□□□ -0.18
PRKCB-209ENST00000498058 GGCTO75223 188 aaKnown RBP13.92□□□□□ -0.18
PRKCB-209ENST00000498058 AKR1C2P52895 323 aa13.92□□□□□ -0.18
PRKCB-209ENST00000498058 KLK9Q2XQG4 91 aa13.92□□□□□ -0.18
PRKCB-209ENST00000498058 TMEM268Q5VZI3 342 aa13.92□□□□□ -0.18
PRKCB-209ENST00000498058 CLEC19AQ6UXS0 136 aa13.92□□□□□ -0.18
PRKCB-209ENST00000498058 DYNLRB2Q8TF09 96 aa13.92□□□□□ -0.18
PRKCB-209ENST00000498058 RRNAD1Q96FB5 475 aaKnown RBP13.92□□□□□ -0.18
PRKCB-209ENST00000498058 SRD5A3Q9H8P0 318 aa13.92□□□□□ -0.18
PRKCB-209ENST00000498058 KLK9Q9UKQ9 250 aa13.92□□□□□ -0.18
PRKCB-209ENST00000498058 A0A0B4J2A0 478 aa13.91□□□□□ -0.18
PRKCB-209ENST00000498058 OR11H12B2RN74 326 aa13.91□□□□□ -0.18
PRKCB-209ENST00000498058 LGALS9O00182 355 aa13.91□□□□□ -0.18
PRKCB-209ENST00000498058 KRASP01116 189 aa13.91□□□□□ -0.18
PRKCB-209ENST00000498058 CRYGCP07315 174 aa13.91□□□□□ -0.18
PRKCB-209ENST00000498058 POU2AF1Q16633 256 aa13.91□□□□□ -0.18
PRKCB-209ENST00000498058 GUCA2BQ16661 112 aa13.91□□□□□ -0.18
PRKCB-209ENST00000498058 SSX9Q7RTT3 188 aa13.91□□□□□ -0.18
PRKCB-209ENST00000498058 FAM219AQ8IW50 185 aa13.91□□□□□ -0.18
PRKCB-209ENST00000498058 CADM3Q8N126 398 aa13.91□□□□□ -0.18
PRKCB-209ENST00000498058 LRTM2Q8N967 370 aa13.91□□□□□ -0.18
PRKCB-209ENST00000498058 OR4A5Q8NH83 315 aa13.91□□□□□ -0.18
PRKCB-209ENST00000498058 MITD1Q8WV92 249 aa13.91□□□□□ -0.18
PRKCB-209ENST00000498058 SHPKQ9UHJ6 478 aa13.91□□□□□ -0.18
PRKCB-209ENST00000498058 TMEM213A2RRL7 107 aa13.9□□□□□ -0.18
PRKCB-209ENST00000498058 REG1AP05451 166 aa13.9□□□□□ -0.18
PRKCB-209ENST00000498058 CTRB1P17538 263 aa13.9□□□□□ -0.18
PRKCB-209ENST00000498058 CBLN1P23435 193 aa13.9□□□□□ -0.18
PRKCB-209ENST00000498058 PSMB6P28072 239 aa13.9□□□□□ -0.18
PRKCB-209ENST00000498058 CTRB2Q6GPI1 263 aa13.9□□□□□ -0.18
PRKCB-209ENST00000498058 H2BFWTQ7Z2G1 175 aa13.9□□□□□ -0.18
PRKCB-209ENST00000498058 GPHB5Q86YW7 130 aa13.9□□□□□ -0.18
PRKCB-209ENST00000498058 SELENOHQ8IZQ5 122 aaKnown RBP13.9□□□□□ -0.18
PRKCB-209ENST00000498058 C12orf45Q8N5I9 185 aaPredicted RBP13.9□□□□□ -0.18
PRKCB-209ENST00000498058 SEC22CQ9BRL7 303 aa13.9□□□□□ -0.18
PRKCB-209ENST00000498058 MLXQ9UH92 298 aa13.9□□□□□ -0.18
PRKCB-209ENST00000498058 TRAV3A0A0B4J244 114 aa13.89□□□□□ -0.19
PRKCB-209ENST00000498058 IFNA21P01568 189 aa13.89□□□□□ -0.19
PRKCB-209ENST00000498058 G6PCP35575 357 aa13.89□□□□□ -0.19
PRKCB-209ENST00000498058 ARL3P36405 182 aa13.89□□□□□ -0.19
PRKCB-209ENST00000498058 ANKRD55Q3KP44 614 aa13.89□□□□□ -0.19
PRKCB-209ENST00000498058 TMEM61Q8N0U2 210 aa13.89□□□□□ -0.19
PRKCB-209ENST00000498058 OR52B4Q8NGK2 314 aa13.89□□□□□ -0.19
PRKCB-209ENST00000498058 LSM10Q969L4 123 aaKnown RBP13.89□□□□□ -0.19
PRKCB-209ENST00000498058 SEC22AQ96IW7 307 aa13.89□□□□□ -0.19
PRKCB-209ENST00000498058 TMEM140Q9NV12 185 aa13.89□□□□□ -0.19
PRKCB-209ENST00000498058 BET1LQ9NYM9 111 aa13.89□□□□□ -0.19
PRKCB-209ENST00000498058 TECRQ9NZ01 308 aaKnown RBP13.89□□□□□ -0.19
PRKCB-209ENST00000498058 IGLV11-55A0A075B6I3 123 aa13.88□□□□□ -0.19
PRKCB-209ENST00000498058 MFSD2BA6NFX1 497 aa13.88□□□□□ -0.19
PRKCB-209ENST00000498058 SNAPC5O75971 98 aa13.88□□□□□ -0.19
PRKCB-209ENST00000498058 IGKV1-39P01597 117 aa13.88□□□□□ -0.19
PRKCB-209ENST00000498058 IGKV1D-39P04432 117 aa13.88□□□□□ -0.19
PRKCB-209ENST00000498058 MAS1LP35410 378 aa13.88□□□□□ -0.19
PRKCB-209ENST00000498058 OR4A47Q6IF82 309 aa13.88□□□□□ -0.19
PRKCB-209ENST00000498058 SLC35G3Q8N808 338 aa13.88□□□□□ -0.19
PRKCB-209ENST00000498058 TMED3Q9Y3Q3 217 aa13.88□□□□□ -0.19
PRKCB-209ENST00000498058 C7orf66A4D0T2 115 aa13.87□□□□□ -0.19
PRKCB-209ENST00000498058 SSNA1O43805 119 aa13.87□□□□□ -0.19
PRKCB-209ENST00000498058 FGF2P09038 288 aa13.87□□□□□ -0.19
PRKCB-209ENST00000498058 RPL8P62917 257 aaKnown RBP13.87□□□□□ -0.19
PRKCB-209ENST00000498058 TM4SF20Q53R12 229 aa13.87□□□□□ -0.19
PRKCB-209ENST00000498058 UNQ9165/PRO28630Q6UXU0 137 aa13.87□□□□□ -0.19
PRKCB-209ENST00000498058 UXS1Q8NBZ7 420 aa13.87□□□□□ -0.19
PRKCB-209ENST00000498058 LHFPL5Q8TAF8 219 aa13.87□□□□□ -0.19
PRKCB-209ENST00000498058 FKBP11Q9NYL4 201 aa13.87□□□□□ -0.19
PRKCB-209ENST00000498058 PRR13Q9NZ81 148 aa13.87□□□□□ -0.19
PRKCB-209ENST00000498058 CACFD1Q9UGQ2 172 aa13.87□□□□□ -0.19
PRKCB-209ENST00000498058 ZNF320A2RRD8 509 aa13.86□□□□□ -0.19
PRKCB-209ENST00000498058 A8MWP6 167 aa13.86□□□□□ -0.19
PRKCB-209ENST00000498058 IGKV1-5P01602 117 aa13.86□□□□□ -0.19
PRKCB-209ENST00000498058 HLA-GP17693 338 aa13.86□□□□□ -0.19
PRKCB-209ENST00000498058 OR2B8PP59922 312 aa13.86□□□□□ -0.19
PRKCB-209ENST00000498058 FAM209BQ5JX69 171 aa13.86□□□□□ -0.19
PRKCB-209ENST00000498058 THOC7Q6I9Y2 204 aaKnown RBP13.86□□□□□ -0.19
PRKCB-209ENST00000498058 LYZL2Q7Z4W2 148 aa13.86□□□□□ -0.19
PRKCB-209ENST00000498058 OR4A16Q8NH70 328 aa13.86□□□□□ -0.19
PRKCB-209ENST00000498058 PRNDQ9UKY0 176 aa13.86□□□□□ -0.19
PRKCB-209ENST00000498058 ALG5Q9Y673 324 aa13.86□□□□□ -0.19
PRKCB-209ENST00000498058 IGLC7A0M8Q6 106 aa13.85□□□□□ -0.19
PRKCB-209ENST00000498058 UPK2O00526 184 aa13.85□□□□□ -0.19
PRKCB-209ENST00000498058 SCAF4O95104 1147 aaKnown RBP13.85□□□□□ -0.19
PRKCB-209ENST00000498058 CLEC3BP05452 202 aa13.85□□□□□ -0.19
PRKCB-209ENST00000498058 EEF1AKMT3Q96AZ1 226 aa13.85□□□□□ -0.19
PRKCB-209ENST00000498058 IGHV3-35A0A0C4DH35 117 aa13.84□□□□□ -0.19
PRKCB-209ENST00000498058 A0A1B0GU03 582 aa13.84□□□□□ -0.19
PRKCB-209ENST00000498058 HOXB5P09067 269 aa13.84□□□□□ -0.19
PRKCB-209ENST00000498058 SULT1A3P0DMM9 295 aa13.84□□□□□ -0.19
PRKCB-209ENST00000498058 SULT1A4P0DMN0 295 aa13.84□□□□□ -0.19
PRKCB-209ENST00000498058 SLC25A6P12236 298 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms