RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 HIST1H1BP16401 226 aaKnown RBP11.72□□□□□ -0.53
NUP50-219ENST00000497960 PRCDQ00LT1 54 aa11.72□□□□□ -0.53
NUP50-219ENST00000497960 GGNBP1Q5YKI7 109 aa11.72□□□□□ -0.53
NUP50-219ENST00000497960 C11orf87Q6NUJ2 197 aa11.72□□□□□ -0.53
NUP50-219ENST00000497960 UXS1Q8NBZ7 420 aa11.72□□□□□ -0.53
NUP50-219ENST00000497960 OR10W1Q8NGF6 305 aa11.72□□□□□ -0.53
NUP50-219ENST00000497960 OR1S1Q8NH92 325 aa11.72□□□□□ -0.53
NUP50-219ENST00000497960 SRSF8Q9BRL6 282 aaKnown RBP11.72□□□□□ -0.53
NUP50-219ENST00000497960 MARVELD1Q9BSK0 173 aa11.72□□□□□ -0.53
NUP50-219ENST00000497960 ENY2Q9NPA8 101 aa11.72□□□□□ -0.53
NUP50-219ENST00000497960 NDUFA4L2Q9NRX3 87 aa11.72□□□□□ -0.53
NUP50-219ENST00000497960 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.72□□□□□ -0.53
NUP50-219ENST00000497960 A0A1B0GU03 582 aa11.71□□□□□ -0.53
NUP50-219ENST00000497960 IGLC7A0M8Q6 106 aa11.71□□□□□ -0.53
NUP50-219ENST00000497960 IGLV1-51P01701 117 aa11.71□□□□□ -0.53
NUP50-219ENST00000497960 CTRB1P17538 263 aa11.71□□□□□ -0.53
NUP50-219ENST00000497960 HSPE1P61604 102 aaKnown RBP11.71□□□□□ -0.53
NUP50-219ENST00000497960 CTRB2Q6GPI1 263 aa11.71□□□□□ -0.53
NUP50-219ENST00000497960 Q6ZRM9 215 aa11.71□□□□□ -0.53
NUP50-219ENST00000497960 HSD17B13Q7Z5P4 300 aaPredicted RBP11.71□□□□□ -0.53
NUP50-219ENST00000497960 C12orf45Q8N5I9 185 aaPredicted RBP11.71□□□□□ -0.53
NUP50-219ENST00000497960 PEMTQ9UBM1 199 aa11.71□□□□□ -0.53
NUP50-219ENST00000497960 BMPR1BO00238 502 aa11.7□□□□□ -0.54
NUP50-219ENST00000497960 CCSO14618 274 aa11.7□□□□□ -0.54
NUP50-219ENST00000497960 OR13C7P0DN81 318 aa11.7□□□□□ -0.54
NUP50-219ENST00000497960 C19orf35Q6ZS72 473 aa11.7□□□□□ -0.54
NUP50-219ENST00000497960 HAPLN4Q86UW8 402 aa11.7□□□□□ -0.54
NUP50-219ENST00000497960 FANCD2OSQ96PS1 177 aa11.7□□□□□ -0.54
NUP50-219ENST00000497960 CEBPZOSA8MTT3 80 aa11.69□□□□□ -0.54
NUP50-219ENST00000497960 NDUFB8O95169 186 aa11.69□□□□□ -0.54
NUP50-219ENST00000497960 SLC25A6P12236 298 aa11.69□□□□□ -0.54
NUP50-219ENST00000497960 SPCS3P61009 180 aa11.69□□□□□ -0.54
NUP50-219ENST00000497960 WT1-ASQ06250 92 aa11.69□□□□□ -0.54
NUP50-219ENST00000497960 IL34Q6ZMJ4 242 aa11.69□□□□□ -0.54
NUP50-219ENST00000497960 EEF1AKMT3Q96AZ1 226 aa11.69□□□□□ -0.54
NUP50-219ENST00000497960 SIGLEC8Q9NYZ4 499 aa11.69□□□□□ -0.54
NUP50-219ENST00000497960 CACFD1Q9UGQ2 172 aa11.69□□□□□ -0.54
NUP50-219ENST00000497960 SNRPGP15A8MWD9 76 aa11.68□□□□□ -0.54
NUP50-219ENST00000497960 FAM25EA8MYX2 175 aa11.68□□□□□ -0.54
NUP50-219ENST00000497960 CYB5BO43169 146 aa11.68□□□□□ -0.54
NUP50-219ENST00000497960 GGCTO75223 188 aaKnown RBP11.68□□□□□ -0.54
NUP50-219ENST00000497960 CSN3P07498 182 aa11.68□□□□□ -0.54
NUP50-219ENST00000497960 ERHP84090 104 aaKnown RBP11.68□□□□□ -0.54
NUP50-219ENST00000497960 TNFRSF9Q07011 255 aa11.68□□□□□ -0.54
NUP50-219ENST00000497960 KLK9Q2XQG4 91 aa11.68□□□□□ -0.54
NUP50-219ENST00000497960 AARDQ4LEZ3 155 aa11.68□□□□□ -0.54
NUP50-219ENST00000497960 OR52E5Q8NH55 327 aa11.68□□□□□ -0.54
NUP50-219ENST00000497960 CXorf58Q96LI9 332 aa11.68□□□□□ -0.54
NUP50-219ENST00000497960 ASCL2Q99929 193 aa11.68□□□□□ -0.54
NUP50-219ENST00000497960 THYN1Q9P016 225 aa11.68□□□□□ -0.54
NUP50-219ENST00000497960 KLK9Q9UKQ9 250 aa11.68□□□□□ -0.54
NUP50-219ENST00000497960 IGLV11-55A0A075B6I3 123 aa11.67□□□□□ -0.54
NUP50-219ENST00000497960 C5orf51A6NDU8 294 aa11.67□□□□□ -0.54
NUP50-219ENST00000497960 MPTX1A8MV57 137 aa11.67□□□□□ -0.54
NUP50-219ENST00000497960 PPP5D1E7EU14 171 aa11.67□□□□□ -0.54
NUP50-219ENST00000497960 GOSR2O14653 212 aa11.67□□□□□ -0.54
NUP50-219ENST00000497960 SSNA1O43805 119 aa11.67□□□□□ -0.54
NUP50-219ENST00000497960 SCGB1D2O95969 90 aa11.67□□□□□ -0.54
NUP50-219ENST00000497960 IGHV3-23P01764 117 aa11.67□□□□□ -0.54
NUP50-219ENST00000497960 ARL3P36405 182 aa11.67□□□□□ -0.54
NUP50-219ENST00000497960 IAH1Q2TAA2 248 aaPredicted RBP11.67□□□□□ -0.54
NUP50-219ENST00000497960 LCN12Q6JVE5 192 aa11.67□□□□□ -0.54
NUP50-219ENST00000497960 CLEC19AQ6UXS0 136 aa11.67□□□□□ -0.54
NUP50-219ENST00000497960 HSPB7Q9UBY9 170 aa11.67□□□□□ -0.54
NUP50-219ENST00000497960 F11RQ9Y624 299 aaKnown RBP11.67□□□□□ -0.54
NUP50-219ENST00000497960 S4R3C0 116 aa11.67□□□□□ -0.54
NUP50-219ENST00000497960 U3KQK5 164 aa11.67□□□□□ -0.54
NUP50-219ENST00000497960 TRBV7-1A0A0A6YYK4 115 aa11.66□□□□□ -0.54
NUP50-219ENST00000497960 FAM90A26D6RGX4 464 aa11.66□□□□□ -0.54
NUP50-219ENST00000497960 OR2C1O95371 312 aa11.66□□□□□ -0.54
NUP50-219ENST00000497960 OXA1LQ15070 435 aa11.66□□□□□ -0.54
NUP50-219ENST00000497960 OR2C3Q8N628 320 aa11.66□□□□□ -0.54
NUP50-219ENST00000497960 DTD1Q8TEA8 209 aa11.66□□□□□ -0.54
NUP50-219ENST00000497960 CCDC140Q96MF4 163 aa11.66□□□□□ -0.54
NUP50-219ENST00000497960 RBKSQ9H477 322 aa11.66□□□□□ -0.54
NUP50-219ENST00000497960 HEYLQ9NQ87 328 aaPredicted RBP11.66□□□□□ -0.54
NUP50-219ENST00000497960 ALG5Q9Y673 324 aa11.66□□□□□ -0.54
NUP50-219ENST00000497960 C7orf66A4D0T2 115 aa11.65□□□□□ -0.54
NUP50-219ENST00000497960 INS-IGF2F8WCM5 200 aa11.65□□□□□ -0.54
NUP50-219ENST00000497960 PITX3O75364 302 aa11.65□□□□□ -0.54
NUP50-219ENST00000497960 MED6O75586 246 aa11.65□□□□□ -0.54
NUP50-219ENST00000497960 SNCAP37840 140 aa11.65□□□□□ -0.54
NUP50-219ENST00000497960 FAM106AQ4KMX7 169 aa11.65□□□□□ -0.54
NUP50-219ENST00000497960 SLC25A24Q6NUK1 477 aa11.65□□□□□ -0.54
NUP50-219ENST00000497960 GSG1LQ6UXU4 331 aa11.65□□□□□ -0.54
NUP50-219ENST00000497960 GPHB5Q86YW7 130 aa11.65□□□□□ -0.54
NUP50-219ENST00000497960 ZBTB8BQ8NAP8 495 aaPredicted RBP11.65□□□□□ -0.54
NUP50-219ENST00000497960 ZNF114Q8NC26 417 aa11.65□□□□□ -0.54
NUP50-219ENST00000497960 OR4D5Q8NGN0 318 aa11.65□□□□□ -0.54
NUP50-219ENST00000497960 OR1L6Q8NGR2 347 aa11.65□□□□□ -0.54
NUP50-219ENST00000497960 OR2K2Q8NGT1 345 aa11.65□□□□□ -0.54
NUP50-219ENST00000497960 DYNLRB2Q8TF09 96 aa11.65□□□□□ -0.54
NUP50-219ENST00000497960 OR10C1Q96KK4 312 aa11.65□□□□□ -0.54
NUP50-219ENST00000497960 WWC2-AS2Q96NR7 200 aa11.65□□□□□ -0.54
NUP50-219ENST00000497960 HIPK2Q9H2X6 1198 aa11.65□□□□□ -0.54
NUP50-219ENST00000497960 GSKIPQ9P0R6 139 aa11.65□□□□□ -0.54
NUP50-219ENST00000497960 DMRT1Q9Y5R6 373 aa11.65□□□□□ -0.54
NUP50-219ENST00000497960 MFSD2BA6NFX1 497 aa11.64□□□□□ -0.55
NUP50-219ENST00000497960 LGALS9O00182 355 aa11.64□□□□□ -0.55
NUP50-219ENST00000497960 WRBO00258 174 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms