RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 DUTP33316 252 aaKnown RBP12.03□□□□□ -0.48
VIM-208ENST00000497849 ELLP55199 621 aaPredicted RBP12.03□□□□□ -0.48
VIM-208ENST00000497849 ZNF124Q15973 351 aa12.03□□□□□ -0.48
VIM-208ENST00000497849 SCGB2B2Q4G0G5 96 aa12.03□□□□□ -0.48
VIM-208ENST00000497849 PLET1Q6UQ28 207 aa12.03□□□□□ -0.48
VIM-208ENST00000497849 APRG1Q8IVJ8 170 aa12.03□□□□□ -0.48
VIM-208ENST00000497849 DUSP18Q8NEJ0 188 aa12.03□□□□□ -0.48
VIM-208ENST00000497849 CD300LFQ8TDQ1 290 aa12.03□□□□□ -0.48
VIM-208ENST00000497849 MOB3AQ96BX8 217 aa12.03□□□□□ -0.48
VIM-208ENST00000497849 FYTTD1Q96QD9 318 aaKnown RBP12.03□□□□□ -0.48
VIM-208ENST00000497849 COPZ2Q9P299 210 aa12.03□□□□□ -0.48
VIM-208ENST00000497849 IGHV3-35A0A0C4DH35 117 aa12.02□□□□□ -0.49
VIM-208ENST00000497849 MFSD2BA6NFX1 497 aa12.02□□□□□ -0.49
VIM-208ENST00000497849 C11orf94C9JXX5 98 aa12.02□□□□□ -0.49
VIM-208ENST00000497849 TNFSF12O43508 249 aa12.02□□□□□ -0.49
VIM-208ENST00000497849 CREBL2O60519 120 aaPredicted RBP12.02□□□□□ -0.49
VIM-208ENST00000497849 CRYGCP07315 174 aa12.02□□□□□ -0.49
VIM-208ENST00000497849 PSMB6P28072 239 aa12.02□□□□□ -0.49
VIM-208ENST00000497849 CCR6P51684 374 aa12.02□□□□□ -0.49
VIM-208ENST00000497849 RPL30P62888 115 aaKnown RBP12.02□□□□□ -0.49
VIM-208ENST00000497849 AADACL3Q5VUY0 350 aa12.02□□□□□ -0.49
VIM-208ENST00000497849 Q6ZNX1 250 aa12.02□□□□□ -0.49
VIM-208ENST00000497849 SCP2D1Q9UJQ7 156 aa12.02□□□□□ -0.49
VIM-208ENST00000497849 UFC1Q9Y3C8 167 aa12.02□□□□□ -0.49
VIM-208ENST00000497849 M0R2N4 97 aa12.01□□□□□ -0.49
VIM-208ENST00000497849 AREGP15514 252 aa12.01□□□□□ -0.49
VIM-208ENST00000497849 GNRHRP30968 328 aa12.01□□□□□ -0.49
VIM-208ENST00000497849 ZNF818PQ6ZRF7 136 aa12.01□□□□□ -0.49
VIM-208ENST00000497849 LHFPL1Q86WI0 220 aa12.01□□□□□ -0.49
VIM-208ENST00000497849 ARRDC1Q8N5I2 433 aa12.01□□□□□ -0.49
VIM-208ENST00000497849 ZNF645Q8N7E2 425 aa12.01□□□□□ -0.49
VIM-208ENST00000497849 OR51S1Q8NGJ8 323 aa12.01□□□□□ -0.49
VIM-208ENST00000497849 MRGPRFQ96AM1 343 aa12.01□□□□□ -0.49
VIM-208ENST00000497849 PRRT1Q99946 306 aa12.01□□□□□ -0.49
VIM-208ENST00000497849 SLC2A9Q9NRM0 540 aa12.01□□□□□ -0.49
VIM-208ENST00000497849 IGHV4-4A0A075B6R2 117 aa12□□□□□ -0.49
VIM-208ENST00000497849 TRBV7-1A0A0A6YYK4 115 aa12□□□□□ -0.49
VIM-208ENST00000497849 OR4C46A6NHA9 309 aa12□□□□□ -0.49
VIM-208ENST00000497849 TCRBP04435 133 aa12□□□□□ -0.49
VIM-208ENST00000497849 MYOD1P15172 320 aa12□□□□□ -0.49
VIM-208ENST00000497849 PGAM2P15259 253 aa12□□□□□ -0.49
VIM-208ENST00000497849 PI3P19957 117 aa12□□□□□ -0.49
VIM-208ENST00000497849 GPR183P32249 361 aa12□□□□□ -0.49
VIM-208ENST00000497849 ADTRPQ96IZ2 230 aa12□□□□□ -0.49
VIM-208ENST00000497849 ZNF436Q9C0F3 470 aaPredicted RBP12□□□□□ -0.49
VIM-208ENST00000497849 APOBP04114 4563 aaKnown RBP11.99□□□□□ -0.49
VIM-208ENST00000497849 IGLV11-55A0A075B6I3 123 aa11.99□□□□□ -0.49
VIM-208ENST00000497849 NDUFB6O95139 128 aa11.99□□□□□ -0.49
VIM-208ENST00000497849 ADMP35318 185 aa11.99□□□□□ -0.49
VIM-208ENST00000497849 RPL27AP46776 148 aaKnown RBP11.99□□□□□ -0.49
VIM-208ENST00000497849 EIF4EBP1Q13541 118 aaPredicted RBP11.99□□□□□ -0.49
VIM-208ENST00000497849 PHLDA2Q53GA4 152 aa11.99□□□□□ -0.49
VIM-208ENST00000497849 OR2B11Q5JQS5 317 aa11.99□□□□□ -0.49
VIM-208ENST00000497849 LAMTOR1Q6IAA8 161 aa11.99□□□□□ -0.49
VIM-208ENST00000497849 VKORC1L1Q8N0U8 176 aa11.99□□□□□ -0.49
VIM-208ENST00000497849 OR13C8Q8NGS7 320 aa11.99□□□□□ -0.49
VIM-208ENST00000497849 OR4A5Q8NH83 315 aa11.99□□□□□ -0.49
VIM-208ENST00000497849 TERB2Q8NHR7 220 aa11.99□□□□□ -0.49
VIM-208ENST00000497849 ZNF502Q8TBZ5 544 aa11.99□□□□□ -0.49
VIM-208ENST00000497849 MARCH1Q8TCQ1 289 aa11.99□□□□□ -0.49
VIM-208ENST00000497849 TMEM190Q8WZ59 177 aa11.99□□□□□ -0.49
VIM-208ENST00000497849 HRH4Q9H3N8 390 aa11.99□□□□□ -0.49
VIM-208ENST00000497849 INMT-MINDY4F8WBC2 141 aa11.98□□□□□ -0.49
VIM-208ENST00000497849 H2AFB2P0C5Z0 115 aa11.98□□□□□ -0.49
VIM-208ENST00000497849 RPA2P15927 270 aa11.98□□□□□ -0.49
VIM-208ENST00000497849 HIST1H1BP16401 226 aaKnown RBP11.98□□□□□ -0.49
VIM-208ENST00000497849 POM121L12Q8N7R1 296 aa11.98□□□□□ -0.49
VIM-208ENST00000497849 SLC25A21Q9BQT8 299 aaPredicted RBP11.98□□□□□ -0.49
VIM-208ENST00000497849 MARVELD1Q9BSK0 173 aa11.98□□□□□ -0.49
VIM-208ENST00000497849 NUDT15Q9NV35 164 aa11.98□□□□□ -0.49
VIM-208ENST00000497849 TRAV6A0A075B6T7 132 aa11.97□□□□□ -0.49
VIM-208ENST00000497849 A0A1B0GVG6 124 aa11.97□□□□□ -0.49
VIM-208ENST00000497849 GPR31O00270 319 aa11.97□□□□□ -0.49
VIM-208ENST00000497849 FCGR3BO75015 233 aa11.97□□□□□ -0.49
VIM-208ENST00000497849 PGLYRP1O75594 196 aaPredicted RBP11.97□□□□□ -0.49
VIM-208ENST00000497849 SLC22A5O76082 557 aa11.97□□□□□ -0.49
VIM-208ENST00000497849 DHFRP00374 187 aa11.97□□□□□ -0.49
VIM-208ENST00000497849 REG1AP05451 166 aa11.97□□□□□ -0.49
VIM-208ENST00000497849 CTSDP07339 412 aaPredicted RBP11.97□□□□□ -0.49
VIM-208ENST00000497849 HLA-DMBP28068 263 aa11.97□□□□□ -0.49
VIM-208ENST00000497849 UCP3P55916 312 aa11.97□□□□□ -0.49
VIM-208ENST00000497849 BRWD1-AS2P59051 145 aa11.97□□□□□ -0.49
VIM-208ENST00000497849 PVRIGQ6DKI7 326 aa11.97□□□□□ -0.49
VIM-208ENST00000497849 Q6ZTC4 211 aa11.97□□□□□ -0.49
VIM-208ENST00000497849 Q8NAQ8 132 aa11.97□□□□□ -0.49
VIM-208ENST00000497849 TCTEX1D2Q8WW35 142 aa11.97□□□□□ -0.49
VIM-208ENST00000497849 CXorf58Q96LI9 332 aa11.97□□□□□ -0.49
VIM-208ENST00000497849 C20orf85Q9H1P6 137 aa11.97□□□□□ -0.49
VIM-208ENST00000497849 KBTBD11O94819 623 aa11.96□□□□□ -0.49
VIM-208ENST00000497849 LGALS9BQ3B8N2 356 aa11.96□□□□□ -0.49
VIM-208ENST00000497849 MAPKAPK5-AS1Q8N8E1 139 aa11.96□□□□□ -0.49
VIM-208ENST00000497849 ZBTB34Q8NCN2 500 aa11.96□□□□□ -0.49
VIM-208ENST00000497849 OR51H1Q8NH63 302 aa11.96□□□□□ -0.49
VIM-208ENST00000497849 TMEM167AQ8TBQ9 72 aa11.96□□□□□ -0.49
VIM-208ENST00000497849 DAZ1Q9NQZ3 744 aaKnown RBP11.96□□□□□ -0.49
VIM-208ENST00000497849 hCG_2014768A0A024R1R8 64 aa11.95□□□□□ -0.5
VIM-208ENST00000497849 TRAV10A0A0B4J240 114 aa11.95□□□□□ -0.5
VIM-208ENST00000497849 CGB1A6NKQ9 187 aa11.95□□□□□ -0.5
VIM-208ENST00000497849 TGOLN2O43493 480 aa11.95□□□□□ -0.5
VIM-208ENST00000497849 RLN1P04808 185 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms