RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 NAA60Q9H7X0 242 aa8.19□□□□□ -1.1
SHROOM3-210ENST00000497440 C21orf62Q9NYP8 219 aa8.19□□□□□ -1.1
SHROOM3-210ENST00000497440 COPZ2Q9P299 210 aa8.19□□□□□ -1.1
SHROOM3-210ENST00000497440 MLXQ9UH92 298 aa8.19□□□□□ -1.1
SHROOM3-210ENST00000497440 NDUFA4O00483 81 aa8.18□□□□□ -1.1
SHROOM3-210ENST00000497440 ST8SIA3O43173 380 aa8.18□□□□□ -1.1
SHROOM3-210ENST00000497440 ATG12O94817 140 aa8.18□□□□□ -1.1
SHROOM3-210ENST00000497440 OR5AC1P0C628 307 aa8.18□□□□□ -1.1
SHROOM3-210ENST00000497440 PGAM2P15259 253 aa8.18□□□□□ -1.1
SHROOM3-210ENST00000497440 PPP5CP53041 499 aa8.18□□□□□ -1.1
SHROOM3-210ENST00000497440 DHODHQ02127 395 aa8.18□□□□□ -1.1
SHROOM3-210ENST00000497440 TMEM187Q14656 261 aa8.18□□□□□ -1.1
SHROOM3-210ENST00000497440 SCGB2B2Q4G0G5 96 aa8.18□□□□□ -1.1
SHROOM3-210ENST00000497440 PLET1Q6UQ28 207 aa8.18□□□□□ -1.1
SHROOM3-210ENST00000497440 UXS1Q8NBZ7 420 aa8.18□□□□□ -1.1
SHROOM3-210ENST00000497440 RBPMSQ93062 196 aaKnown RBP8.18□□□□□ -1.1
SHROOM3-210ENST00000497440 IL22RA2Q969J5 263 aa8.18□□□□□ -1.1
SHROOM3-210ENST00000497440 ASCL2Q99929 193 aa8.18□□□□□ -1.1
SHROOM3-210ENST00000497440 C15orf62A8K5M9 175 aa8.17□□□□□ -1.1
SHROOM3-210ENST00000497440 CD7P09564 240 aa8.17□□□□□ -1.1
SHROOM3-210ENST00000497440 RNASE2P10153 161 aaKnown RBP8.17□□□□□ -1.1
SHROOM3-210ENST00000497440 ERHP84090 104 aaKnown RBP8.17□□□□□ -1.1
SHROOM3-210ENST00000497440 TMEM61Q8N0U2 210 aa8.17□□□□□ -1.1
SHROOM3-210ENST00000497440 CACNG8Q8WXS5 425 aa8.17□□□□□ -1.1
SHROOM3-210ENST00000497440 HINT2Q9BX68 163 aa8.17□□□□□ -1.1
SHROOM3-210ENST00000497440 PALMDQ9NP74 551 aa8.17□□□□□ -1.1
SHROOM3-210ENST00000497440 GAR1Q9NY12 217 aaKnown RBP8.17□□□□□ -1.1
SHROOM3-210ENST00000497440 SCP2D1Q9UJQ7 156 aa8.17□□□□□ -1.1
SHROOM3-210ENST00000497440 UFC1Q9Y3C8 167 aa8.17□□□□□ -1.1
SHROOM3-210ENST00000497440 OR2T8A6NH00 312 aa8.16□□□□□ -1.1
SHROOM3-210ENST00000497440 MT-CO2P00403 227 aa8.16□□□□□ -1.1
SHROOM3-210ENST00000497440 MFAP4P55083 255 aa8.16□□□□□ -1.1
SHROOM3-210ENST00000497440 SPCS3P61009 180 aa8.16□□□□□ -1.1
SHROOM3-210ENST00000497440 HAGHQ16775 308 aa8.16□□□□□ -1.1
SHROOM3-210ENST00000497440 NMSQ5H8A3 153 aa8.16□□□□□ -1.1
SHROOM3-210ENST00000497440 SGPP2Q8IWX5 399 aa8.16□□□□□ -1.1
SHROOM3-210ENST00000497440 GPR146Q96CH1 333 aa8.16□□□□□ -1.1
SHROOM3-210ENST00000497440 WDR89Q96FK6 387 aaPredicted RBP8.16□□□□□ -1.1
SHROOM3-210ENST00000497440 SCGB3A2Q96PL1 93 aa8.16□□□□□ -1.1
SHROOM3-210ENST00000497440 FAM110AQ9BQ89 295 aa8.16□□□□□ -1.1
SHROOM3-210ENST00000497440 NEURL2Q9BR09 285 aa8.16□□□□□ -1.1
SHROOM3-210ENST00000497440 EDA2RQ9HAV5 297 aa8.16□□□□□ -1.1
SHROOM3-210ENST00000497440 PLEKHA3Q9HB20 300 aa8.16□□□□□ -1.1
SHROOM3-210ENST00000497440 DAZ1Q9NQZ3 744 aaKnown RBP8.16□□□□□ -1.1
SHROOM3-210ENST00000497440 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.16□□□□□ -1.1
SHROOM3-210ENST00000497440 C14orf166Q9Y224 244 aaKnown RBP8.16□□□□□ -1.1
SHROOM3-210ENST00000497440 ZNF320A2RRD8 509 aa8.15□□□□□ -1.1
SHROOM3-210ENST00000497440 RBMY1BA6NDE4 496 aaKnown RBP8.15□□□□□ -1.1
SHROOM3-210ENST00000497440 RBMY1EA6NEQ0 496 aaKnown RBP8.15□□□□□ -1.1
SHROOM3-210ENST00000497440 TSPAN4O14817 238 aa8.15□□□□□ -1.1
SHROOM3-210ENST00000497440 NOL3O60936 208 aaKnown RBP8.15□□□□□ -1.1
SHROOM3-210ENST00000497440 RBMY1DP0C7P1 496 aaKnown RBP8.15□□□□□ -1.1
SHROOM3-210ENST00000497440 AKR1C2P52895 323 aa8.15□□□□□ -1.1
SHROOM3-210ENST00000497440 FAM90A2PQ658T7 463 aa8.15□□□□□ -1.1
SHROOM3-210ENST00000497440 ZNF57Q68EA5 555 aaPredicted RBP8.15□□□□□ -1.1
SHROOM3-210ENST00000497440 GTSCR1Q86UQ5 136 aa8.15□□□□□ -1.1
SHROOM3-210ENST00000497440 LRTM2Q8N967 370 aa8.15□□□□□ -1.1
SHROOM3-210ENST00000497440 TMEM170AQ8WVE7 144 aa8.15□□□□□ -1.1
SHROOM3-210ENST00000497440 RRNAD1Q96FB5 475 aaKnown RBP8.15□□□□□ -1.1
SHROOM3-210ENST00000497440 RCHY1Q96PM5 261 aa8.15□□□□□ -1.1
SHROOM3-210ENST00000497440 SRRQ9GZT4 340 aa8.15□□□□□ -1.1
SHROOM3-210ENST00000497440 FNDC4Q9H6D8 234 aaPredicted RBP8.15□□□□□ -1.1
SHROOM3-210ENST00000497440 CACFD1Q9UGQ2 172 aa8.15□□□□□ -1.1
SHROOM3-210ENST00000497440 IGHV3-21A0A0B4J1V1 117 aa8.14□□□□□ -1.11
SHROOM3-210ENST00000497440 A0A0B4J2A0 478 aa8.14□□□□□ -1.11
SHROOM3-210ENST00000497440 PITX3O75364 302 aa8.14□□□□□ -1.11
SHROOM3-210ENST00000497440 TMEM50AO95807 157 aa8.14□□□□□ -1.11
SHROOM3-210ENST00000497440 TRIM16LQ309B1 348 aa8.14□□□□□ -1.11
SHROOM3-210ENST00000497440 C2orf83Q53S99 150 aa8.14□□□□□ -1.11
SHROOM3-210ENST00000497440 CITED4Q96RK1 184 aa8.14□□□□□ -1.11
SHROOM3-210ENST00000497440 SDHCQ99643 169 aaPredicted RBP8.14□□□□□ -1.11
SHROOM3-210ENST00000497440 SLC25A21Q9BQT8 299 aaPredicted RBP8.14□□□□□ -1.11
SHROOM3-210ENST00000497440 MRPL36Q9P0J6 103 aaKnown RBP8.14□□□□□ -1.11
SHROOM3-210ENST00000497440 SHPKQ9UHJ6 478 aa8.14□□□□□ -1.11
SHROOM3-210ENST00000497440 SMPXQ9UHP9 88 aa8.14□□□□□ -1.11
SHROOM3-210ENST00000497440 KCNIP3Q9Y2W7 256 aa8.14□□□□□ -1.11
SHROOM3-210ENST00000497440 HYDINQ4G0P3 5121 aa8.13□□□□□ -1.11
SHROOM3-210ENST00000497440 IGHV3-35A0A0C4DH35 117 aa8.13□□□□□ -1.11
SHROOM3-210ENST00000497440 OR11H12B2RN74 326 aa8.13□□□□□ -1.11
SHROOM3-210ENST00000497440 CORTO00230 105 aa8.13□□□□□ -1.11
SHROOM3-210ENST00000497440 IFNA17P01571 189 aa8.13□□□□□ -1.11
SHROOM3-210ENST00000497440 CD81P60033 236 aa8.13□□□□□ -1.11
SHROOM3-210ENST00000497440 RELQ04864 619 aaPredicted RBP8.13□□□□□ -1.11
SHROOM3-210ENST00000497440 MLANAQ16655 118 aa8.13□□□□□ -1.11
SHROOM3-210ENST00000497440 TMEM128Q5BJH2 165 aa8.13□□□□□ -1.11
SHROOM3-210ENST00000497440 TMEM268Q5VZI3 342 aa8.13□□□□□ -1.11
SHROOM3-210ENST00000497440 BTNL8Q6UX41 500 aa8.13□□□□□ -1.11
SHROOM3-210ENST00000497440 DEFB125Q8N687 156 aa8.13□□□□□ -1.11
SHROOM3-210ENST00000497440 SLC35G3Q8N808 338 aa8.13□□□□□ -1.11
SHROOM3-210ENST00000497440 OR4X1Q8NH49 305 aa8.13□□□□□ -1.11
SHROOM3-210ENST00000497440 DYNLRB2Q8TF09 96 aa8.13□□□□□ -1.11
SHROOM3-210ENST00000497440 SPAG8Q99932 426 aaPredicted RBP8.13□□□□□ -1.11
SHROOM3-210ENST00000497440 HIPK2Q9H2X6 1198 aa8.13□□□□□ -1.11
SHROOM3-210ENST00000497440 VSIRQ9H7M9 311 aa8.13□□□□□ -1.11
SHROOM3-210ENST00000497440 ZFAND3Q9H8U3 227 aa8.13□□□□□ -1.11
SHROOM3-210ENST00000497440 HSPB7Q9UBY9 170 aa8.13□□□□□ -1.11
SHROOM3-210ENST00000497440 IGHV7-4-1A0A0J9YVY3 117 aa8.12□□□□□ -1.11
SHROOM3-210ENST00000497440 DUXBA0A1W2PPF3 345 aa8.12□□□□□ -1.11
SHROOM3-210ENST00000497440 C3orf84H3BNL1 204 aa8.12□□□□□ -1.11
SHROOM3-210ENST00000497440 CHEK1O14757 476 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms