RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 IGLV11-55A0A075B6I3 123 aa10.92□□□□□ -0.66
CXCL12-208ENST00000496375 A0A0B4J2A0 478 aa10.92□□□□□ -0.66
CXCL12-208ENST00000496375 DHFRP00374 187 aa10.92□□□□□ -0.66
CXCL12-208ENST00000496375 HSPE1P61604 102 aaKnown RBP10.92□□□□□ -0.66
CXCL12-208ENST00000496375 WT1-ASQ06250 92 aa10.92□□□□□ -0.66
CXCL12-208ENST00000496375 NMSQ5H8A3 153 aa10.92□□□□□ -0.66
CXCL12-208ENST00000496375 TMEM268Q5VZI3 342 aa10.92□□□□□ -0.66
CXCL12-208ENST00000496375 TMED4Q7Z7H5 227 aa10.92□□□□□ -0.66
CXCL12-208ENST00000496375 NECAP1Q8NC96 275 aa10.92□□□□□ -0.66
CXCL12-208ENST00000496375 OR4A16Q8NH70 328 aa10.92□□□□□ -0.66
CXCL12-208ENST00000496375 RRNAD1Q96FB5 475 aaKnown RBP10.92□□□□□ -0.66
CXCL12-208ENST00000496375 MARVELD1Q9BSK0 173 aa10.92□□□□□ -0.66
CXCL12-208ENST00000496375 EDA2RQ9HAV5 297 aa10.92□□□□□ -0.66
CXCL12-208ENST00000496375 SIGLEC8Q9NYZ4 499 aa10.92□□□□□ -0.66
CXCL12-208ENST00000496375 SHPKQ9UHJ6 478 aa10.92□□□□□ -0.66
CXCL12-208ENST00000496375 BIRC6Q9NR09 4857 aa10.92□□□□□ -0.66
CXCL12-208ENST00000496375 IZUMO1RA6ND01 250 aa10.91□□□□□ -0.66
CXCL12-208ENST00000496375 SFT2D2O95562 160 aa10.91□□□□□ -0.66
CXCL12-208ENST00000496375 PRH1P02810 166 aa10.91□□□□□ -0.66
CXCL12-208ENST00000496375 HIST1H1BP16401 226 aaKnown RBP10.91□□□□□ -0.66
CXCL12-208ENST00000496375 RHOGP84095 191 aa10.91□□□□□ -0.66
CXCL12-208ENST00000496375 PPP1R1AQ13522 171 aa10.91□□□□□ -0.66
CXCL12-208ENST00000496375 EXOSC2Q13868 293 aaKnown RBP10.91□□□□□ -0.66
CXCL12-208ENST00000496375 HAGHQ16775 308 aa10.91□□□□□ -0.66
CXCL12-208ENST00000496375 IZUMO4Q1ZYL8 232 aa10.91□□□□□ -0.66
CXCL12-208ENST00000496375 FAM209BQ5JX69 171 aa10.91□□□□□ -0.66
CXCL12-208ENST00000496375 LCN12Q6JVE5 192 aa10.91□□□□□ -0.66
CXCL12-208ENST00000496375 Q6ZRM9 215 aa10.91□□□□□ -0.66
CXCL12-208ENST00000496375 GTSCR1Q86UQ5 136 aa10.91□□□□□ -0.66
CXCL12-208ENST00000496375 LGI3Q8N145 548 aa10.91□□□□□ -0.66
CXCL12-208ENST00000496375 SLC35G3Q8N808 338 aa10.91□□□□□ -0.66
CXCL12-208ENST00000496375 ZNF114Q8NC26 417 aa10.91□□□□□ -0.66
CXCL12-208ENST00000496375 OR10W1Q8NGF6 305 aa10.91□□□□□ -0.66
CXCL12-208ENST00000496375 OR52E5Q8NH55 327 aa10.91□□□□□ -0.66
CXCL12-208ENST00000496375 SPATA25Q9BR10 227 aa10.91□□□□□ -0.66
CXCL12-208ENST00000496375 TUBA4BQ9H853 241 aa10.91□□□□□ -0.66
CXCL12-208ENST00000496375 GAR1Q9NY12 217 aaKnown RBP10.91□□□□□ -0.66
CXCL12-208ENST00000496375 PEMTQ9UBM1 199 aa10.91□□□□□ -0.66
CXCL12-208ENST00000496375 DMRT1Q9Y5R6 373 aa10.91□□□□□ -0.66
CXCL12-208ENST00000496375 BMPR1BO00238 502 aa10.9□□□□□ -0.66
CXCL12-208ENST00000496375 ST8SIA3O43173 380 aa10.9□□□□□ -0.66
CXCL12-208ENST00000496375 MECP2P51608 486 aaKnown RBP10.9□□□□□ -0.66
CXCL12-208ENST00000496375 ATP5G2Q06055 141 aa10.9□□□□□ -0.66
CXCL12-208ENST00000496375 CACFD1Q9UGQ2 172 aa10.9□□□□□ -0.66
CXCL12-208ENST00000496375 F11RQ9Y624 299 aaKnown RBP10.9□□□□□ -0.66
CXCL12-208ENST00000496375 LCE6AA0A183 80 aa10.89□□□□□ -0.67
CXCL12-208ENST00000496375 INMT-MINDY4F8WBC2 141 aa10.89□□□□□ -0.67
CXCL12-208ENST00000496375 OR13C7P0DN81 318 aa10.89□□□□□ -0.67
CXCL12-208ENST00000496375 CD300CQ08708 224 aa10.89□□□□□ -0.67
CXCL12-208ENST00000496375 ANKRD55Q3KP44 614 aa10.89□□□□□ -0.67
CXCL12-208ENST00000496375 PVRIGQ6DKI7 326 aa10.89□□□□□ -0.67
CXCL12-208ENST00000496375 C19orf35Q6ZS72 473 aa10.89□□□□□ -0.67
CXCL12-208ENST00000496375 OR2C3Q8N628 320 aa10.89□□□□□ -0.67
CXCL12-208ENST00000496375 OR1L6Q8NGR2 347 aa10.89□□□□□ -0.67
CXCL12-208ENST00000496375 GPR146Q96CH1 333 aa10.89□□□□□ -0.67
CXCL12-208ENST00000496375 C20orf85Q9H1P6 137 aa10.89□□□□□ -0.67
CXCL12-208ENST00000496375 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.89□□□□□ -0.67
CXCL12-208ENST00000496375 PAIP2BQ9ULR5 123 aaKnown RBP10.89□□□□□ -0.67
CXCL12-208ENST00000496375 FLVCR2Q9UPI3 526 aa10.89□□□□□ -0.67
CXCL12-208ENST00000496375 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.88□□□□□ -0.67
CXCL12-208ENST00000496375 C9orf170A2RU37 121 aa10.88□□□□□ -0.67
CXCL12-208ENST00000496375 OR2J3O76001 311 aa10.88□□□□□ -0.67
CXCL12-208ENST00000496375 TCRBP04435 133 aa10.88□□□□□ -0.67
CXCL12-208ENST00000496375 REG1AP05451 166 aa10.88□□□□□ -0.67
CXCL12-208ENST00000496375 SLC25A6P12236 298 aa10.88□□□□□ -0.67
CXCL12-208ENST00000496375 VAMP1P23763 118 aa10.88□□□□□ -0.67
CXCL12-208ENST00000496375 C15orf32Q32M92 178 aa10.88□□□□□ -0.67
CXCL12-208ENST00000496375 LYZL2Q7Z4W2 148 aa10.88□□□□□ -0.67
CXCL12-208ENST00000496375 LYG2Q86SG7 212 aa10.88□□□□□ -0.67
CXCL12-208ENST00000496375 OR2K2Q8NGT1 345 aa10.88□□□□□ -0.67
CXCL12-208ENST00000496375 OR1P1Q8NH06 330 aa10.88□□□□□ -0.67
CXCL12-208ENST00000496375 RNASE11Q8TAA1 199 aaKnown RBP10.88□□□□□ -0.67
CXCL12-208ENST00000496375 ATP6V0BQ99437 205 aa10.88□□□□□ -0.67
CXCL12-208ENST00000496375 PRR13Q9NZ81 148 aa10.88□□□□□ -0.67
CXCL12-208ENST00000496375 CACNG5Q9UF02 275 aa10.88□□□□□ -0.67
CXCL12-208ENST00000496375 A0A1B0GU03 582 aa10.87□□□□□ -0.67
CXCL12-208ENST00000496375 CYB5BO43169 146 aa10.87□□□□□ -0.67
CXCL12-208ENST00000496375 OR4E1P0C645 316 aa10.87□□□□□ -0.67
CXCL12-208ENST00000496375 SULT1A3P0DMM9 295 aa10.87□□□□□ -0.67
CXCL12-208ENST00000496375 SULT1A4P0DMN0 295 aa10.87□□□□□ -0.67
CXCL12-208ENST00000496375 MFAP2P55001 183 aa10.87□□□□□ -0.67
CXCL12-208ENST00000496375 SPCS3P61009 180 aa10.87□□□□□ -0.67
CXCL12-208ENST00000496375 DHRS2Q13268 280 aa10.87□□□□□ -0.67
CXCL12-208ENST00000496375 BSXQ3C1V8 233 aa10.87□□□□□ -0.67
CXCL12-208ENST00000496375 CD300EQ496F6 205 aaPredicted RBP10.87□□□□□ -0.67
CXCL12-208ENST00000496375 ADAMTSL5Q6ZMM2 481 aa10.87□□□□□ -0.67
CXCL12-208ENST00000496375 PLEKHA3Q9HB20 300 aa10.87□□□□□ -0.67
CXCL12-208ENST00000496375 THYN1Q9P016 225 aa10.87□□□□□ -0.67
CXCL12-208ENST00000496375 FBXL7Q9UJT9 491 aa10.87□□□□□ -0.67
CXCL12-208ENST00000496375 TMED3Q9Y3Q3 217 aa10.87□□□□□ -0.67
CXCL12-208ENST00000496375 ALMS1Q8TCU4 4167 aa10.86□□□□□ -0.67
CXCL12-208ENST00000496375 PPP5D1E7EU14 171 aa10.86□□□□□ -0.67
CXCL12-208ENST00000496375 PITX3O75364 302 aa10.86□□□□□ -0.67
CXCL12-208ENST00000496375 NDUFB8O95169 186 aa10.86□□□□□ -0.67
CXCL12-208ENST00000496375 HLA-AP01891 365 aaKnown RBP10.86□□□□□ -0.67
CXCL12-208ENST00000496375 DEFA4P12838 97 aa10.86□□□□□ -0.67
CXCL12-208ENST00000496375 ANXA7P20073 488 aaKnown RBP10.86□□□□□ -0.67
CXCL12-208ENST00000496375 CD81P60033 236 aa10.86□□□□□ -0.67
CXCL12-208ENST00000496375 SMCO1Q147U7 214 aa10.86□□□□□ -0.67
CXCL12-208ENST00000496375 VN1R17PQ8TDU5 208 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms