RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 LINC00479Q96M42 142 aa10.6□□□□□ -0.71
PTPN7-217ENST00000495688 CUL9Q8IWT3 2517 aa10.6□□□□□ -0.71
PTPN7-217ENST00000495688 ZFHX2Q9C0A1 2572 aaPredicted RBP10.6□□□□□ -0.71
PTPN7-217ENST00000495688 KIR2DL5BA0A0G2JN68 375 aa10.6□□□□□ -0.71
PTPN7-217ENST00000495688 KIR2DL5BA0A0G2JPC4 375 aa10.6□□□□□ -0.71
PTPN7-217ENST00000495688 CA1P00915 261 aaPredicted RBP10.6□□□□□ -0.71
PTPN7-217ENST00000495688 SSBP2P81877 361 aaPredicted RBP10.6□□□□□ -0.71
PTPN7-217ENST00000495688 SLC25A48Q6ZT89 311 aaKnown RBP10.6□□□□□ -0.71
PTPN7-217ENST00000495688 KIR2DL5AQ8N109 375 aa10.6□□□□□ -0.71
PTPN7-217ENST00000495688 OR2T6Q8NHC8 308 aa10.6□□□□□ -0.71
PTPN7-217ENST00000495688 IL19Q9UHD0 177 aa10.6□□□□□ -0.71
PTPN7-217ENST00000495688 RPUSD1Q9UJJ7 312 aaKnown RBP10.6□□□□□ -0.71
PTPN7-217ENST00000495688 GATA4P43694 442 aa10.59□□□□□ -0.71
PTPN7-217ENST00000495688 TPTE2P1Q5T6R2 138 aa10.59□□□□□ -0.71
PTPN7-217ENST00000495688 ZNF788Q6ZQV5 615 aa10.59□□□□□ -0.71
PTPN7-217ENST00000495688 ADTRPQ96IZ2 230 aa10.59□□□□□ -0.71
PTPN7-217ENST00000495688 CHODLQ9H9P2 273 aa10.59□□□□□ -0.71
PTPN7-217ENST00000495688 RNASE2P10153 161 aaKnown RBP10.59□□□□□ -0.71
PTPN7-217ENST00000495688 CCL3L1P16619 93 aa10.59□□□□□ -0.71
PTPN7-217ENST00000495688 CHRNB4P30926 498 aa10.59□□□□□ -0.71
PTPN7-217ENST00000495688 NUTF2P61970 127 aaKnown RBP10.59□□□□□ -0.71
PTPN7-217ENST00000495688 VN1R17PQ8TDU5 208 aa10.59□□□□□ -0.71
PTPN7-217ENST00000495688 FAM103A1Q9BTL3 118 aaKnown RBP10.59□□□□□ -0.71
PTPN7-217ENST00000495688 MRPL20Q9BYC9 149 aaKnown RBP10.59□□□□□ -0.71
PTPN7-217ENST00000495688 GNB4Q9HAV0 340 aa10.59□□□□□ -0.71
PTPN7-217ENST00000495688 PARD6AQ9NPB6 346 aa10.59□□□□□ -0.71
PTPN7-217ENST00000495688 TMEM167BQ9NRX6 74 aa10.59□□□□□ -0.71
PTPN7-217ENST00000495688 TECRQ9NZ01 308 aaKnown RBP10.59□□□□□ -0.71
PTPN7-217ENST00000495688 SLC25A10Q9UBX3 287 aaPredicted RBP10.59□□□□□ -0.71
PTPN7-217ENST00000495688 IGLV2-8P01709 118 aa10.58□□□□□ -0.72
PTPN7-217ENST00000495688 MGST1P10620 155 aaKnown RBP10.58□□□□□ -0.72
PTPN7-217ENST00000495688 TPPP2P59282 170 aa10.58□□□□□ -0.72
PTPN7-217ENST00000495688 DIAPH2-AS1Q14236 149 aa10.58□□□□□ -0.72
PTPN7-217ENST00000495688 RTL8BQ17RB0 113 aa10.58□□□□□ -0.72
PTPN7-217ENST00000495688 PIP4P1Q86T03 277 aa10.58□□□□□ -0.72
PTPN7-217ENST00000495688 ZGRF1Q86YA3 2104 aa10.58□□□□□ -0.72
PTPN7-217ENST00000495688 CORO2AQ92828 525 aa10.58□□□□□ -0.72
PTPN7-217ENST00000495688 NAT8BQ9UHF3 227 aa10.58□□□□□ -0.72
PTPN7-217ENST00000495688 ZNF257Q9Y2Q1 563 aa10.58□□□□□ -0.72
PTPN7-217ENST00000495688 K7EM74 188 aa10.58□□□□□ -0.72
PTPN7-217ENST00000495688 TCAPO15273 167 aa10.58□□□□□ -0.72
PTPN7-217ENST00000495688 FCN3O75636 299 aa10.58□□□□□ -0.72
PTPN7-217ENST00000495688 C10orf55Q5SWW7 151 aa10.58□□□□□ -0.72
PTPN7-217ENST00000495688 MRPL54Q6P161 138 aaKnown RBP10.58□□□□□ -0.72
PTPN7-217ENST00000495688 SAMD10Q9BYL1 202 aa10.58□□□□□ -0.72
PTPN7-217ENST00000495688 PAM16Q9Y3D7 125 aa10.58□□□□□ -0.72
PTPN7-217ENST00000495688 LY96Q9Y6Y9 160 aa10.58□□□□□ -0.72
PTPN7-217ENST00000495688 SVEP1Q4LDE5 3571 aa10.57□□□□□ -0.72
PTPN7-217ENST00000495688 POLEQ07864 2286 aa10.57□□□□□ -0.72
PTPN7-217ENST00000495688 ZNF705AQ6ZN79 300 aaPredicted RBP10.57□□□□□ -0.72
PTPN7-217ENST00000495688 OR5AU1Q8NGC0 362 aa10.57□□□□□ -0.72
PTPN7-217ENST00000495688 HARBI1Q96MB7 349 aa10.57□□□□□ -0.72
PTPN7-217ENST00000495688 RCHY1Q96PM5 261 aa10.57□□□□□ -0.72
PTPN7-217ENST00000495688 SLC25A33Q9BSK2 321 aa10.57□□□□□ -0.72
PTPN7-217ENST00000495688 SFXN3Q9BWM7 321 aa10.57□□□□□ -0.72
PTPN7-217ENST00000495688 NCOR1P1Q9H4R4 102 aa10.57□□□□□ -0.72
PTPN7-217ENST00000495688 TRAV9-1A0A075B6T8 112 aa10.57□□□□□ -0.72
PTPN7-217ENST00000495688 OR5G3P0C626 314 aa10.57□□□□□ -0.72
PTPN7-217ENST00000495688 CX3CL1P78423 397 aa10.57□□□□□ -0.72
PTPN7-217ENST00000495688 TIGITQ495A1 244 aa10.57□□□□□ -0.72
PTPN7-217ENST00000495688 C2orf83Q53S99 150 aa10.57□□□□□ -0.72
PTPN7-217ENST00000495688 ZADH2Q8N4Q0 377 aa10.57□□□□□ -0.72
PTPN7-217ENST00000495688 FAM168AQ92567 244 aa10.57□□□□□ -0.72
PTPN7-217ENST00000495688 RAB9BQ9NP90 201 aa10.57□□□□□ -0.72
PTPN7-217ENST00000495688 SERTAD4Q9NUC0 356 aa10.57□□□□□ -0.72
PTPN7-217ENST00000495688 FNDC10F2Z333 226 aa10.56□□□□□ -0.72
PTPN7-217ENST00000495688 PYYP10082 97 aa10.56□□□□□ -0.72
PTPN7-217ENST00000495688 PAFAH1B2P68402 229 aa10.56□□□□□ -0.72
PTPN7-217ENST00000495688 CD69Q07108 199 aa10.56□□□□□ -0.72
PTPN7-217ENST00000495688 SSBP3Q9BWW4 388 aaPredicted RBP10.56□□□□□ -0.72
PTPN7-217ENST00000495688 ESDP10768 282 aa10.56□□□□□ -0.72
PTPN7-217ENST00000495688 CD40P25942 277 aa10.56□□□□□ -0.72
PTPN7-217ENST00000495688 G0S2P27469 103 aa10.56□□□□□ -0.72
PTPN7-217ENST00000495688 COMPP49747 757 aaPredicted RBP10.56□□□□□ -0.72
PTPN7-217ENST00000495688 SELENOVP59797 346 aa10.56□□□□□ -0.72
PTPN7-217ENST00000495688 IBA57Q5T440 356 aaKnown RBP10.56□□□□□ -0.72
PTPN7-217ENST00000495688 TMEM136Q6ZRR5 245 aa10.56□□□□□ -0.72
PTPN7-217ENST00000495688 LHFPL4Q7Z7J7 247 aa10.56□□□□□ -0.72
PTPN7-217ENST00000495688 SLC35E1Q96K37 410 aa10.56□□□□□ -0.72
PTPN7-217ENST00000495688 FAM167A-AS1Q96KT0 104 aa10.56□□□□□ -0.72
PTPN7-217ENST00000495688 NEU1Q99519 415 aa10.56□□□□□ -0.72
PTPN7-217ENST00000495688 GNB1LQ9BYB4 327 aa10.56□□□□□ -0.72
PTPN7-217ENST00000495688 LINC00574Q9H8X3 128 aa10.56□□□□□ -0.72
PTPN7-217ENST00000495688 FBXL7Q9UJT9 491 aa10.56□□□□□ -0.72
PTPN7-217ENST00000495688 M0R143 59 aa10.55□□□□□ -0.72
PTPN7-217ENST00000495688 C8orf88P0DMB2 117 aa10.55□□□□□ -0.72
PTPN7-217ENST00000495688 RANP62826 216 aaKnown RBP10.55□□□□□ -0.72
PTPN7-217ENST00000495688 UBE2L3P68036 154 aaKnown RBP10.55□□□□□ -0.72
PTPN7-217ENST00000495688 IGF2BP2-AS1Q96M15 143 aa10.55□□□□□ -0.72
PTPN7-217ENST00000495688 SLC25A2Q9BXI2 301 aa10.55□□□□□ -0.72
PTPN7-217ENST00000495688 COMMD5Q9GZQ3 224 aa10.55□□□□□ -0.72
PTPN7-217ENST00000495688 FNDC4Q9H6D8 234 aaPredicted RBP10.55□□□□□ -0.72
PTPN7-217ENST00000495688 BET1LQ9NYM9 111 aa10.55□□□□□ -0.72
PTPN7-217ENST00000495688 PSMB11A5LHX3 300 aa10.55□□□□□ -0.72
PTPN7-217ENST00000495688 RAB4AP20338 218 aa10.55□□□□□ -0.72
PTPN7-217ENST00000495688 Q0VG73 95 aa10.55□□□□□ -0.72
PTPN7-217ENST00000495688 TEX43Q6ZNM6 134 aa10.55□□□□□ -0.72
PTPN7-217ENST00000495688 OR1L8Q8NGR8 309 aa10.55□□□□□ -0.72
PTPN7-217ENST00000495688 OR5B3Q8NH48 314 aa10.55□□□□□ -0.72
PTPN7-217ENST00000495688 NDUFA4L2Q9NRX3 87 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms