RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 IL22RA2Q969J5 263 aa13.36□□□□□ -0.27
HDAC4-211ENST00000494800 TRIM63Q969Q1 353 aa13.36□□□□□ -0.27
HDAC4-211ENST00000494800 PINX1Q96BK5 328 aaKnown RBP13.36□□□□□ -0.27
HDAC4-211ENST00000494800 GALNT14Q96FL9 552 aa13.36□□□□□ -0.27
HDAC4-211ENST00000494800 ZNF436Q9C0F3 470 aaPredicted RBP13.36□□□□□ -0.27
HDAC4-211ENST00000494800 TUBA4BQ9H853 241 aa13.36□□□□□ -0.27
HDAC4-211ENST00000494800 NDUFA13Q9P0J0 144 aa13.36□□□□□ -0.27
HDAC4-211ENST00000494800 MRPL27Q9P0M9 148 aaKnown RBP13.36□□□□□ -0.27
HDAC4-211ENST00000494800 U3KQK5 164 aa13.36□□□□□ -0.27
HDAC4-211ENST00000494800 SORL1Q92673 2214 aa13.35□□□□□ -0.27
HDAC4-211ENST00000494800 IGHV3-35A0A0C4DH35 117 aa13.35□□□□□ -0.27
HDAC4-211ENST00000494800 IZUMO1RA6ND01 250 aa13.35□□□□□ -0.27
HDAC4-211ENST00000494800 NDUFA4O00483 81 aa13.35□□□□□ -0.27
HDAC4-211ENST00000494800 AKR1C4P17516 323 aa13.35□□□□□ -0.27
HDAC4-211ENST00000494800 INPP1P49441 399 aa13.35□□□□□ -0.27
HDAC4-211ENST00000494800 SPCS3P61009 180 aa13.35□□□□□ -0.27
HDAC4-211ENST00000494800 SRPXP78539 464 aa13.35□□□□□ -0.27
HDAC4-211ENST00000494800 SELENOHQ8IZQ5 122 aaKnown RBP13.35□□□□□ -0.27
HDAC4-211ENST00000494800 Q8N1Y9 231 aa13.35□□□□□ -0.27
HDAC4-211ENST00000494800 UXS1Q8NBZ7 420 aa13.35□□□□□ -0.27
HDAC4-211ENST00000494800 ZMAT4Q9H898 229 aa13.35□□□□□ -0.27
HDAC4-211ENST00000494800 DAZ1Q9NQZ3 744 aaKnown RBP13.35□□□□□ -0.27
HDAC4-211ENST00000494800 TMEM56-RWDD3S4R434 201 aa13.35□□□□□ -0.27
HDAC4-211ENST00000494800 A8MZ25 164 aa13.34□□□□□ -0.27
HDAC4-211ENST00000494800 I3L2K1 104 aa13.34□□□□□ -0.27
HDAC4-211ENST00000494800 MT-CO2P00403 227 aa13.34□□□□□ -0.27
HDAC4-211ENST00000494800 FCGR2BP31994 310 aaPredicted RBP13.34□□□□□ -0.27
HDAC4-211ENST00000494800 ETV6P41212 452 aa13.34□□□□□ -0.27
HDAC4-211ENST00000494800 CD81P60033 236 aa13.34□□□□□ -0.27
HDAC4-211ENST00000494800 ZNF79Q15937 498 aa13.34□□□□□ -0.27
HDAC4-211ENST00000494800 TM4SF20Q53R12 229 aa13.34□□□□□ -0.27
HDAC4-211ENST00000494800 UNQ9165/PRO28630Q6UXU0 137 aa13.34□□□□□ -0.27
HDAC4-211ENST00000494800 OR52E5Q8NH55 327 aa13.34□□□□□ -0.27
HDAC4-211ENST00000494800 CACNG8Q8WXS5 425 aa13.34□□□□□ -0.27
HDAC4-211ENST00000494800 TMEM190Q8WZ59 177 aa13.34□□□□□ -0.27
HDAC4-211ENST00000494800 A0A0G2JRQ6 117 aa13.33□□□□□ -0.28
HDAC4-211ENST00000494800 GNG7O60262 68 aa13.33□□□□□ -0.28
HDAC4-211ENST00000494800 SCGB2A1O75556 95 aa13.33□□□□□ -0.28
HDAC4-211ENST00000494800 NPBWR1P48145 328 aa13.33□□□□□ -0.28
HDAC4-211ENST00000494800 ANKRD55Q3KP44 614 aa13.33□□□□□ -0.28
HDAC4-211ENST00000494800 RBPMS2Q6ZRY4 209 aaKnown RBP13.33□□□□□ -0.28
HDAC4-211ENST00000494800 SLC16A13Q7RTY0 426 aa13.33□□□□□ -0.28
HDAC4-211ENST00000494800 SBSPONQ8IVN8 264 aa13.33□□□□□ -0.28
HDAC4-211ENST00000494800 DUSP18Q8NEJ0 188 aa13.33□□□□□ -0.28
HDAC4-211ENST00000494800 LHFPL5Q8TAF8 219 aa13.33□□□□□ -0.28
HDAC4-211ENST00000494800 WWC2-AS2Q96NR7 200 aa13.33□□□□□ -0.28
HDAC4-211ENST00000494800 SLC25A21Q9BQT8 299 aaPredicted RBP13.33□□□□□ -0.28
HDAC4-211ENST00000494800 NEURL2Q9BR09 285 aa13.33□□□□□ -0.28
HDAC4-211ENST00000494800 CHRDL1Q9BU40 450 aa13.33□□□□□ -0.28
HDAC4-211ENST00000494800 C20orf24Q9BUV8 137 aa13.33□□□□□ -0.28
HDAC4-211ENST00000494800 CACNG5Q9UF02 275 aa13.33□□□□□ -0.28
HDAC4-211ENST00000494800 EDN2P20800 178 aa13.32□□□□□ -0.28
HDAC4-211ENST00000494800 TMEM187Q14656 261 aa13.32□□□□□ -0.28
HDAC4-211ENST00000494800 AARDQ4LEZ3 155 aa13.32□□□□□ -0.28
HDAC4-211ENST00000494800 TRIQKQ629K1 86 aa13.32□□□□□ -0.28
HDAC4-211ENST00000494800 BTNL8Q6UX41 500 aa13.32□□□□□ -0.28
HDAC4-211ENST00000494800 TMED4Q7Z7H5 227 aa13.32□□□□□ -0.28
HDAC4-211ENST00000494800 LGI3Q8N145 548 aa13.32□□□□□ -0.28
HDAC4-211ENST00000494800 TMEM230Q96A57 120 aa13.32□□□□□ -0.28
HDAC4-211ENST00000494800 HEYLQ9NQ87 328 aaPredicted RBP13.32□□□□□ -0.28
HDAC4-211ENST00000494800 MLXQ9UH92 298 aa13.32□□□□□ -0.28
HDAC4-211ENST00000494800 TRAV25A0A0B4J276 109 aa13.31□□□□□ -0.28
HDAC4-211ENST00000494800 C15orf62A8K5M9 175 aa13.31□□□□□ -0.28
HDAC4-211ENST00000494800 ZNF785A8K8V0 405 aa13.31□□□□□ -0.28
HDAC4-211ENST00000494800 CEBPZOSA8MTT3 80 aa13.31□□□□□ -0.28
HDAC4-211ENST00000494800 F8W735 103 aaPredicted RBP13.31□□□□□ -0.28
HDAC4-211ENST00000494800 YIF1AO95070 293 aa13.31□□□□□ -0.28
HDAC4-211ENST00000494800 CTSGP08311 255 aa13.31□□□□□ -0.28
HDAC4-211ENST00000494800 C8orf88P0DMB2 117 aa13.31□□□□□ -0.28
HDAC4-211ENST00000494800 SULT1A3P0DMM9 295 aa13.31□□□□□ -0.28
HDAC4-211ENST00000494800 SULT1A4P0DMN0 295 aa13.31□□□□□ -0.28
HDAC4-211ENST00000494800 HTR2BP41595 481 aa13.31□□□□□ -0.28
HDAC4-211ENST00000494800 TMEM128Q5BJH2 165 aa13.31□□□□□ -0.28
HDAC4-211ENST00000494800 LAMTOR1Q6IAA8 161 aa13.31□□□□□ -0.28
HDAC4-211ENST00000494800 Q6ZRM9 215 aa13.31□□□□□ -0.28
HDAC4-211ENST00000494800 TMEM61Q8N0U2 210 aa13.31□□□□□ -0.28
HDAC4-211ENST00000494800 GPR146Q96CH1 333 aa13.31□□□□□ -0.28
HDAC4-211ENST00000494800 WDR89Q96FK6 387 aaPredicted RBP13.31□□□□□ -0.28
HDAC4-211ENST00000494800 C19orf73Q9NVV2 129 aa13.31□□□□□ -0.28
HDAC4-211ENST00000494800 A0A0B4J2A0 478 aa13.3□□□□□ -0.28
HDAC4-211ENST00000494800 K7EMT4 169 aa13.3□□□□□ -0.28
HDAC4-211ENST00000494800 RNASE2P10153 161 aaKnown RBP13.3□□□□□ -0.28
HDAC4-211ENST00000494800 ADMP35318 185 aa13.3□□□□□ -0.28
HDAC4-211ENST00000494800 OPRK1P41145 380 aa13.3□□□□□ -0.28
HDAC4-211ENST00000494800 CCR6P51684 374 aa13.3□□□□□ -0.28
HDAC4-211ENST00000494800 OR52B4Q8NGK2 314 aa13.3□□□□□ -0.28
HDAC4-211ENST00000494800 SRRQ9GZT4 340 aa13.3□□□□□ -0.28
HDAC4-211ENST00000494800 HIPK2Q9H2X6 1198 aa13.3□□□□□ -0.28
HDAC4-211ENST00000494800 SHPKQ9UHJ6 478 aa13.3□□□□□ -0.28
HDAC4-211ENST00000494800 COL7A1Q02388 2944 aa13.3□□□□□ -0.28
HDAC4-211ENST00000494800 DNAH9Q9NYC9 4486 aa13.29□□□□□ -0.28
HDAC4-211ENST00000494800 RPS10-NUDT3A0A1W2PQS6 291 aa13.29□□□□□ -0.28
HDAC4-211ENST00000494800 NAP1L6A6NFF2 107 aa13.29□□□□□ -0.28
HDAC4-211ENST00000494800 SCAF4O95104 1147 aaKnown RBP13.29□□□□□ -0.28
HDAC4-211ENST00000494800 IGHV3-48P01763 117 aa13.29□□□□□ -0.28
HDAC4-211ENST00000494800 VAMP1P23763 118 aa13.29□□□□□ -0.28
HDAC4-211ENST00000494800 NOXA1Q86UR1 476 aa13.29□□□□□ -0.28
HDAC4-211ENST00000494800 DUXBA0A1W2PPF3 345 aa13.28□□□□□ -0.28
HDAC4-211ENST00000494800 CENPXA8MT69 81 aa13.28□□□□□ -0.28
HDAC4-211ENST00000494800 BMI1P35226 326 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms