RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 MT-CO2P00403 227 aa7.16□□□□□ -1.26
MSH5-218ENST00000494646 PPP5CP53041 499 aa7.16□□□□□ -1.26
MSH5-218ENST00000494646 MFAP4P55083 255 aa7.16□□□□□ -1.26
MSH5-218ENST00000494646 PIGPP57054 158 aa7.16□□□□□ -1.26
MSH5-218ENST00000494646 ERHP84090 104 aaKnown RBP7.16□□□□□ -1.26
MSH5-218ENST00000494646 SP6Q3SY56 376 aa7.16□□□□□ -1.26
MSH5-218ENST00000494646 SCGB2B2Q4G0G5 96 aa7.16□□□□□ -1.26
MSH5-218ENST00000494646 RNASE10Q5GAN6 216 aaKnown RBP7.16□□□□□ -1.26
MSH5-218ENST00000494646 LAMTOR1Q6IAA8 161 aa7.16□□□□□ -1.26
MSH5-218ENST00000494646 SPSB3Q6PJ21 355 aa7.16□□□□□ -1.26
MSH5-218ENST00000494646 OR4D10Q8NGI6 311 aa7.16□□□□□ -1.26
MSH5-218ENST00000494646 OR1P1Q8NH06 330 aa7.16□□□□□ -1.26
MSH5-218ENST00000494646 TP53RKQ96S44 253 aa7.16□□□□□ -1.26
MSH5-218ENST00000494646 C5orf66Q9H5L9 145 aa7.16□□□□□ -1.26
MSH5-218ENST00000494646 FAM212BQ9NTI7 297 aaPredicted RBP7.16□□□□□ -1.26
MSH5-218ENST00000494646 MTFP1Q9UDX5 166 aa7.16□□□□□ -1.26
MSH5-218ENST00000494646 IGKV3-7A0A075B6H7 116 aa7.15□□□□□ -1.26
MSH5-218ENST00000494646 IGHV3OR16-13A0A075B7E8 117 aa7.15□□□□□ -1.26
MSH5-218ENST00000494646 IGHV3-74A0A0B4J1X5 117 aa7.15□□□□□ -1.26
MSH5-218ENST00000494646 C3orf85A0A1B0GTC6 90 aa7.15□□□□□ -1.26
MSH5-218ENST00000494646 I3L2K1 104 aa7.15□□□□□ -1.26
MSH5-218ENST00000494646 RGS13O14921 159 aa7.15□□□□□ -1.26
MSH5-218ENST00000494646 IGKV1-5P01602 117 aa7.15□□□□□ -1.26
MSH5-218ENST00000494646 CTSDP07339 412 aaPredicted RBP7.15□□□□□ -1.26
MSH5-218ENST00000494646 ETV6P41212 452 aa7.15□□□□□ -1.26
MSH5-218ENST00000494646 PRCDQ00LT1 54 aa7.15□□□□□ -1.26
MSH5-218ENST00000494646 SPCS2Q15005 226 aa7.15□□□□□ -1.26
MSH5-218ENST00000494646 GPR141Q7Z602 305 aa7.15□□□□□ -1.26
MSH5-218ENST00000494646 LHFPL1Q86WI0 220 aa7.15□□□□□ -1.26
MSH5-218ENST00000494646 TMEM229BQ8NBD8 167 aa7.15□□□□□ -1.26
MSH5-218ENST00000494646 MARCH1Q8TCQ1 289 aa7.15□□□□□ -1.26
MSH5-218ENST00000494646 TRIM63Q969Q1 353 aa7.15□□□□□ -1.26
MSH5-218ENST00000494646 GGTLC1Q9BX51 225 aa7.15□□□□□ -1.26
MSH5-218ENST00000494646 DAZ1Q9NQZ3 744 aaKnown RBP7.15□□□□□ -1.26
MSH5-218ENST00000494646 COPZ2Q9P299 210 aa7.15□□□□□ -1.26
MSH5-218ENST00000494646 VPS13DQ5THJ4 4388 aa7.15□□□□□ -1.27
MSH5-218ENST00000494646 A0A0B4J293 547 aa7.14□□□□□ -1.27
MSH5-218ENST00000494646 LCE6AA0A183 80 aa7.14□□□□□ -1.27
MSH5-218ENST00000494646 K7EMT4 169 aa7.14□□□□□ -1.27
MSH5-218ENST00000494646 TSPAN4O14817 238 aa7.14□□□□□ -1.27
MSH5-218ENST00000494646 NUPL2O15504 423 aaKnown RBP7.14□□□□□ -1.27
MSH5-218ENST00000494646 RAB3DO95716 219 aa7.14□□□□□ -1.27
MSH5-218ENST00000494646 IFNA17P01571 189 aa7.14□□□□□ -1.27
MSH5-218ENST00000494646 TFPI2P48307 235 aa7.14□□□□□ -1.27
MSH5-218ENST00000494646 ALDH3B2P48448 385 aa7.14□□□□□ -1.27
MSH5-218ENST00000494646 AKR1C2P52895 323 aa7.14□□□□□ -1.27
MSH5-218ENST00000494646 TAS2R19P59542 299 aa7.14□□□□□ -1.27
MSH5-218ENST00000494646 RND3P61587 244 aa7.14□□□□□ -1.27
MSH5-218ENST00000494646 KMT2AQ03164 3969 aa7.14□□□□□ -1.27
MSH5-218ENST00000494646 MLANAQ16655 118 aa7.14□□□□□ -1.27
MSH5-218ENST00000494646 TRIM16LQ309B1 348 aa7.14□□□□□ -1.27
MSH5-218ENST00000494646 ANKRD39Q53RE8 183 aa7.14□□□□□ -1.27
MSH5-218ENST00000494646 FAAP20Q6NZ36 180 aa7.14□□□□□ -1.27
MSH5-218ENST00000494646 STEAP1BQ6NZ63 245 aa7.14□□□□□ -1.27
MSH5-218ENST00000494646 CLVS1Q8IUQ0 354 aaPredicted RBP7.14□□□□□ -1.27
MSH5-218ENST00000494646 TERB2Q8NHR7 220 aa7.14□□□□□ -1.27
MSH5-218ENST00000494646 ZNF486Q96H40 463 aaPredicted RBP7.14□□□□□ -1.27
MSH5-218ENST00000494646 ZNF414Q96IQ9 312 aa7.14□□□□□ -1.27
MSH5-218ENST00000494646 RNF2Q99496 336 aa7.14□□□□□ -1.27
MSH5-218ENST00000494646 OVOL2Q9BRP0 275 aa7.14□□□□□ -1.27
MSH5-218ENST00000494646 MRPS26Q9BYN8 205 aaKnown RBP7.14□□□□□ -1.27
MSH5-218ENST00000494646 SMPXQ9UHP9 88 aa7.14□□□□□ -1.27
MSH5-218ENST00000494646 BIRC6Q9NR09 4857 aa7.13□□□□□ -1.27
MSH5-218ENST00000494646 TRAV14DV4A0A0A6YYC5 116 aa7.13□□□□□ -1.27
MSH5-218ENST00000494646 IGHV7-4-1A0A0J9YVY3 117 aa7.13□□□□□ -1.27
MSH5-218ENST00000494646 C15orf62A8K5M9 175 aa7.13□□□□□ -1.27
MSH5-218ENST00000494646 GABARAPH6UMI1 98 aa7.13□□□□□ -1.27
MSH5-218ENST00000494646 ST8SIA3O43173 380 aa7.13□□□□□ -1.27
MSH5-218ENST00000494646 GNG7O60262 68 aa7.13□□□□□ -1.27
MSH5-218ENST00000494646 RPL35AP18077 110 aaKnown RBP7.13□□□□□ -1.27
MSH5-218ENST00000494646 SNCAP37840 140 aa7.13□□□□□ -1.27
MSH5-218ENST00000494646 ZNF124Q15973 351 aa7.13□□□□□ -1.27
MSH5-218ENST00000494646 Q6ZRM9 215 aa7.13□□□□□ -1.27
MSH5-218ENST00000494646 WFDC3Q8IUB2 231 aa7.13□□□□□ -1.27
MSH5-218ENST00000494646 APRG1Q8IVJ8 170 aa7.13□□□□□ -1.27
MSH5-218ENST00000494646 GBGT1Q8N5D6 347 aa7.13□□□□□ -1.27
MSH5-218ENST00000494646 ARRDC1Q8N5I2 433 aa7.13□□□□□ -1.27
MSH5-218ENST00000494646 TMEM116Q8NCL8 245 aa7.13□□□□□ -1.27
MSH5-218ENST00000494646 OR13C8Q8NGS7 320 aa7.13□□□□□ -1.27
MSH5-218ENST00000494646 ZFAND1Q8TCF1 268 aa7.13□□□□□ -1.27
MSH5-218ENST00000494646 ATP6V0BQ99437 205 aa7.13□□□□□ -1.27
MSH5-218ENST00000494646 TXN2Q99757 166 aa7.13□□□□□ -1.27
MSH5-218ENST00000494646 SPAG8Q99932 426 aaPredicted RBP7.13□□□□□ -1.27
MSH5-218ENST00000494646 RHPN1-AS1Q9BWJ2 59 aa7.13□□□□□ -1.27
MSH5-218ENST00000494646 NXF2Q9GZY0 626 aaKnown RBP7.13□□□□□ -1.27
MSH5-218ENST00000494646 AGRNO00468 2067 aa7.12□□□□□ -1.27
MSH5-218ENST00000494646 IGHV3-66A0A0C4DH42 116 aa7.12□□□□□ -1.27
MSH5-218ENST00000494646 A0A0G2JRQ6 117 aa7.12□□□□□ -1.27
MSH5-218ENST00000494646 TEX13DA0A0J9YY54 714 aaPredicted RBP7.12□□□□□ -1.27
MSH5-218ENST00000494646 CHEK1O14757 476 aa7.12□□□□□ -1.27
MSH5-218ENST00000494646 TMEM50AO95807 157 aa7.12□□□□□ -1.27
MSH5-218ENST00000494646 APOHP02749 345 aaPredicted RBP7.12□□□□□ -1.27
MSH5-218ENST00000494646 CD74P04233 296 aa7.12□□□□□ -1.27
MSH5-218ENST00000494646 P0C879 139 aa7.12□□□□□ -1.27
MSH5-218ENST00000494646 FCGR2BP31994 310 aaPredicted RBP7.12□□□□□ -1.27
MSH5-218ENST00000494646 RELQ04864 619 aaPredicted RBP7.12□□□□□ -1.27
MSH5-218ENST00000494646 IL18Q14116 193 aa7.12□□□□□ -1.27
MSH5-218ENST00000494646 ODF3L2Q3SX64 289 aa7.12□□□□□ -1.27
MSH5-218ENST00000494646 TOMM20LQ6UXN7 152 aa7.12□□□□□ -1.27
MSH5-218ENST00000494646 SLC35G3Q8N808 338 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms