RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 KIR2DS2P43631 304 aa10.23□□□□□ -0.77
ERCC3-209ENST00000494464 LPAR6P43657 344 aa10.23□□□□□ -0.77
ERCC3-209ENST00000494464 GNB1P62873 340 aa10.23□□□□□ -0.77
ERCC3-209ENST00000494464 SSBP2P81877 361 aaPredicted RBP10.23□□□□□ -0.77
ERCC3-209ENST00000494464 ZNF616Q08AN1 781 aa10.23□□□□□ -0.77
ERCC3-209ENST00000494464 C9orf66Q5T8R8 295 aa10.23□□□□□ -0.77
ERCC3-209ENST00000494464 ASPHD1Q5U4P2 390 aa10.23□□□□□ -0.77
ERCC3-209ENST00000494464 UNQ5815/PRO19632Q6UWF5 114 aa10.23□□□□□ -0.77
ERCC3-209ENST00000494464 CLCC1Q96S66 551 aa10.23□□□□□ -0.77
ERCC3-209ENST00000494464 MED9Q9NWA0 146 aa10.23□□□□□ -0.77
ERCC3-209ENST00000494464 LINC00473A8K010 186 aa10.22□□□□□ -0.77
ERCC3-209ENST00000494464 NMBP08949 121 aa10.22□□□□□ -0.77
ERCC3-209ENST00000494464 POLR2GP62487 172 aaKnown RBP eCLIP10.22□□□□□ -0.77
ERCC3-209ENST00000494464 FXYD3Q14802 87 aa10.22□□□□□ -0.77
ERCC3-209ENST00000494464 BAP18Q8IXM2 172 aa10.22□□□□□ -0.77
ERCC3-209ENST00000494464 SPAG16Q8N0X2 631 aa10.22□□□□□ -0.77
ERCC3-209ENST00000494464 LFNGQ8NES3 379 aa10.22□□□□□ -0.77
ERCC3-209ENST00000494464 OR1N2Q8NGR9 330 aa10.22□□□□□ -0.77
ERCC3-209ENST00000494464 OSR1Q8TAX0 266 aaPredicted RBP10.22□□□□□ -0.77
ERCC3-209ENST00000494464 ZC4H2Q9NQZ6 224 aa10.22□□□□□ -0.77
ERCC3-209ENST00000494464 LYRM2Q9NU23 88 aaPredicted RBP10.22□□□□□ -0.77
ERCC3-209ENST00000494464 CACNG5Q9UF02 275 aa10.22□□□□□ -0.77
ERCC3-209ENST00000494464 FBXL17Q9UF56 701 aa10.22□□□□□ -0.77
ERCC3-209ENST00000494464 WI2-2373I1.2A0A1W2PRP0 233 aa10.21□□□□□ -0.78
ERCC3-209ENST00000494464 H3BUA1 57 aa10.21□□□□□ -0.78
ERCC3-209ENST00000494464 WRBO00258 174 aa10.21□□□□□ -0.78
ERCC3-209ENST00000494464 SSSCA1O60232 199 aa10.21□□□□□ -0.78
ERCC3-209ENST00000494464 RAMP3O60896 148 aa10.21□□□□□ -0.78
ERCC3-209ENST00000494464 JTBO76095 146 aa10.21□□□□□ -0.78
ERCC3-209ENST00000494464 S1PR2O95136 353 aa10.21□□□□□ -0.78
ERCC3-209ENST00000494464 CRYZL1O95825 349 aa10.21□□□□□ -0.78
ERCC3-209ENST00000494464 LGALS1P09382 135 aaKnown RBP10.21□□□□□ -0.78
ERCC3-209ENST00000494464 BRWD1-AS2P59051 145 aa10.21□□□□□ -0.78
ERCC3-209ENST00000494464 UBE2KP61086 200 aa10.21□□□□□ -0.78
ERCC3-209ENST00000494464 VAMP2P63027 116 aa10.21□□□□□ -0.78
ERCC3-209ENST00000494464 BAXQ07812 192 aa10.21□□□□□ -0.78
ERCC3-209ENST00000494464 VMA21Q3ZAQ7 101 aa10.21□□□□□ -0.78
ERCC3-209ENST00000494464 OR2C3Q8N628 320 aa10.21□□□□□ -0.78
ERCC3-209ENST00000494464 LRRC20Q8TCA0 184 aa10.21□□□□□ -0.78
ERCC3-209ENST00000494464 TMEM68Q96MH6 324 aa10.21□□□□□ -0.78
ERCC3-209ENST00000494464 RAB40CQ96S21 281 aa10.21□□□□□ -0.78
ERCC3-209ENST00000494464 SLC25A31Q9H0C2 315 aa10.21□□□□□ -0.78
ERCC3-209ENST00000494464 SRRM4A7MD48 611 aaKnown RBP10.2□□□□□ -0.78
ERCC3-209ENST00000494464 SEC14L6B5MCN3 397 aa10.2□□□□□ -0.78
ERCC3-209ENST00000494464 BRI3O95415 125 aa10.2□□□□□ -0.78
ERCC3-209ENST00000494464 EWSR1Q01844 656 aaKnown RBP eCLIP10.2□□□□□ -0.78
ERCC3-209ENST00000494464 PJVKQ0ZLH3 352 aa10.2□□□□□ -0.78
ERCC3-209ENST00000494464 EIF5AL1Q6IS14 154 aaKnown RBP10.2□□□□□ -0.78
ERCC3-209ENST00000494464 Q6ZRM9 215 aa10.2□□□□□ -0.78
ERCC3-209ENST00000494464 TEX45Q8NA69 505 aa10.2□□□□□ -0.78
ERCC3-209ENST00000494464 UBAC2Q8NBM4 344 aa10.2□□□□□ -0.78
ERCC3-209ENST00000494464 OR5B12Q96R08 314 aa10.2□□□□□ -0.78
ERCC3-209ENST00000494464 PRELID3BQ9Y3B1 194 aa10.2□□□□□ -0.78
ERCC3-209ENST00000494464 CNIH1O95406 144 aa10.19□□□□□ -0.78
ERCC3-209ENST00000494464 HPRT1P00492 218 aa10.19□□□□□ -0.78
ERCC3-209ENST00000494464 INSL3P51460 131 aa10.19□□□□□ -0.78
ERCC3-209ENST00000494464 TPPP2P59282 170 aa10.19□□□□□ -0.78
ERCC3-209ENST00000494464 TAS2R30P59541 319 aa10.19□□□□□ -0.78
ERCC3-209ENST00000494464 MRGPRG-AS1Q2M3A8 158 aa10.19□□□□□ -0.78
ERCC3-209ENST00000494464 ARV1Q9H2C2 271 aa10.19□□□□□ -0.78
ERCC3-209ENST00000494464 DNAH9Q9NYC9 4486 aa10.18□□□□□ -0.78
ERCC3-209ENST00000494464 BORCS7-ASMTA0A0B4J1R7 106 aa10.18□□□□□ -0.78
ERCC3-209ENST00000494464 LINC01619G3V211 115 aa10.18□□□□□ -0.78
ERCC3-209ENST00000494464 SYNGR2O43760 224 aa10.18□□□□□ -0.78
ERCC3-209ENST00000494464 FCGR3BO75015 233 aa10.18□□□□□ -0.78
ERCC3-209ENST00000494464 TRGV3P03979 118 aa10.18□□□□□ -0.78
ERCC3-209ENST00000494464 SAA1P0DJI8 122 aaPredicted RBP10.18□□□□□ -0.78
ERCC3-209ENST00000494464 PAX9P55771 341 aa10.18□□□□□ -0.78
ERCC3-209ENST00000494464 PRSS8Q16651 343 aa10.18□□□□□ -0.78
ERCC3-209ENST00000494464 AARDQ4LEZ3 155 aa10.18□□□□□ -0.78
ERCC3-209ENST00000494464 OR2B11Q5JQS5 317 aa10.18□□□□□ -0.78
ERCC3-209ENST00000494464 RPL7L1Q6DKI1 246 aaKnown RBP10.18□□□□□ -0.78
ERCC3-209ENST00000494464 TMEM252Q8N6L7 170 aa10.18□□□□□ -0.78
ERCC3-209ENST00000494464 OR4S2Q8NH73 311 aa10.18□□□□□ -0.78
ERCC3-209ENST00000494464 RHOVQ96L33 236 aa10.18□□□□□ -0.78
ERCC3-209ENST00000494464 MAGT1Q9H0U3 335 aa10.18□□□□□ -0.78
ERCC3-209ENST00000494464 HSPB7Q9UBY9 170 aa10.18□□□□□ -0.78
ERCC3-209ENST00000494464 IGHV4OR15-8A0A075B7B6 117 aa10.17□□□□□ -0.78
ERCC3-209ENST00000494464 A0A087WW49 117 aa10.17□□□□□ -0.78
ERCC3-209ENST00000494464 IGSF23A1L1A6 192 aa10.17□□□□□ -0.78
ERCC3-209ENST00000494464 MARCH11A6NNE9 402 aa10.17□□□□□ -0.78
ERCC3-209ENST00000494464 OVOL1O14753 267 aa10.17□□□□□ -0.78
ERCC3-209ENST00000494464 MED6O75586 246 aa10.17□□□□□ -0.78
ERCC3-209ENST00000494464 TMEM50AO95807 157 aa10.17□□□□□ -0.78
ERCC3-209ENST00000494464 KRASP01116 189 aa10.17□□□□□ -0.78
ERCC3-209ENST00000494464 G6PCP35575 357 aa10.17□□□□□ -0.78
ERCC3-209ENST00000494464 CAV2P51636 162 aa10.17□□□□□ -0.78
ERCC3-209ENST00000494464 COMMD7Q86VX2 200 aa10.17□□□□□ -0.78
ERCC3-209ENST00000494464 SRSF12Q8WXF0 261 aaKnown RBP10.17□□□□□ -0.78
ERCC3-209ENST00000494464 SMIM8Q96KF7 97 aa10.17□□□□□ -0.78
ERCC3-209ENST00000494464 MS4A10Q96PG2 267 aa10.17□□□□□ -0.78
ERCC3-209ENST00000494464 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.17□□□□□ -0.78
ERCC3-209ENST00000494464 CACFD1Q9UGQ2 172 aa10.17□□□□□ -0.78
ERCC3-209ENST00000494464 A0A0G2JLM5 398 aa10.16□□□□□ -0.78
ERCC3-209ENST00000494464 ANKRD34BA5PLL1 514 aa10.16□□□□□ -0.78
ERCC3-209ENST00000494464 FAM24AA6NFZ4 105 aa10.16□□□□□ -0.78
ERCC3-209ENST00000494464 LY86O95711 162 aa10.16□□□□□ -0.78
ERCC3-209ENST00000494464 IGHV3-11P01762 117 aa10.16□□□□□ -0.78
ERCC3-209ENST00000494464 HSPB1P04792 205 aaKnown RBP10.16□□□□□ -0.78
ERCC3-209ENST00000494464 NQO2P16083 231 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms