RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 DOCK5Q9H7D0 1870 aa2.24□□□□□ -2.05
CMSS1-207ENST00000494412 CHD6Q8TD26 2715 aa2.24□□□□□ -2.05
CMSS1-207ENST00000494412 ARFGEF1Q9Y6D6 1849 aa2.24□□□□□ -2.05
CMSS1-207ENST00000494412 RGPD8O14715 1765 aaPredicted RBP2.23□□□□□ -2.05
CMSS1-207ENST00000494412 SBF1O95248 1867 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 USP54Q70EL1 1684 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 LMO7Q8WWI1 1683 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 MDFIC2A0A1B0GVS7 189 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 A0A1B0GW54 56 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 I3L521 148 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 TXNDC9O14530 226 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 CD5P06127 495 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 ZNF705DP0CH99 300 aaPredicted RBP2.23□□□□□ -2.05
CMSS1-207ENST00000494412 TAS2R20P59543 309 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 HIST1H3AP68431 136 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 H3F3AP84243 136 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 RUNX1Q01196 453 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 LIN52Q52LA3 116 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 FAM173BQ6P4H8 233 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 SMARCD3Q6STE5 483 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 LINC00304Q8N9R0 145 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 OR10X1Q8NGY0 326 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 FGF13Q92913 245 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 ERMAPQ96PL5 475 aaPredicted RBP2.23□□□□□ -2.05
CMSS1-207ENST00000494412 PKMYT1Q99640 499 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 MIEN1Q9BRT3 115 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 TTTY13Q9BZ97 58 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 NMNAT1Q9HAN9 279 aaPredicted RBP2.23□□□□□ -2.05
CMSS1-207ENST00000494412 PRTFDC1Q9NRG1 225 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 FAM32AQ9Y421 112 aaKnown RBP2.23□□□□□ -2.05
CMSS1-207ENST00000494412 MMACHCQ9Y4U1 282 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 ARL5AQ9Y689 179 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 IQGAP3Q86VI3 1631 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 SPTBN4Q9H254 2564 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 SHROOM3Q8TF72 1996 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 FASNP49327 2511 aaKnown RBP2.23□□□□□ -2.05
CMSS1-207ENST00000494412 PAPPA2Q9BXP8 1791 aa2.23□□□□□ -2.05
CMSS1-207ENST00000494412 IFT172Q9UG01 1749 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 RALGAPA2Q2PPJ7 1873 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 KIAA0100Q14667 2235 aaKnown RBP2.22□□□□□ -2.05
CMSS1-207ENST00000494412 KIF13BQ9NQT8 1826 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 TRBV20OR9-2A0A075B6H5 130 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 A0A0J9YY10 115 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 SPRR5A0A1B0GTR4 108 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 A0A1B0GX78 115 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 PDE6DO43924 150 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 CRYZL1O95825 349 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 CTSGP08311 255 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 SRP19P09132 144 aaKnown RBP2.22□□□□□ -2.05
CMSS1-207ENST00000494412 CST2P09228 141 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 GZMBP10144 247 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 COL8A2P25067 703 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 S100A7P31151 101 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 RBM11P57052 281 aaKnown RBP2.22□□□□□ -2.05
CMSS1-207ENST00000494412 RPS20P60866 119 aaKnown RBP2.22□□□□□ -2.05
CMSS1-207ENST00000494412 VBP1P61758 197 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 POLR2GP62487 172 aaKnown RBP eCLIP2.22□□□□□ -2.05
CMSS1-207ENST00000494412 LCE3AQ5TA76 89 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 SSX8Q7RTT4 187 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 PXT1Q8NFP0 134 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 OR8B12Q8NGG6 310 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 PHOSPHO2Q8TCD6 241 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 AP3S1Q92572 193 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 COMMD5Q9GZQ3 224 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 WDR61Q9GZS3 305 aaKnown RBP2.22□□□□□ -2.05
CMSS1-207ENST00000494412 AICDAQ9GZX7 198 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 C14orf105Q9NVL8 296 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 IDI2-AS1Q9NZ38 188 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 SCN11AQ9UI33 1791 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 KDM6AO15550 1401 aaPredicted RBP2.22□□□□□ -2.05
CMSS1-207ENST00000494412 CASKIN1Q8WXD9 1431 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 NCOR1O75376 2440 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 EYSQ5T1H1 3165 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 COL1A2P08123 1366 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 ABCC12Q96J65 1359 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 ABCC6O95255 1503 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 C5P01031 1676 aa2.22□□□□□ -2.05
CMSS1-207ENST00000494412 SIPA1L1O43166 1804 aa2.21□□□□□ -2.05
CMSS1-207ENST00000494412 TTC21AQ8NDW8 1320 aa2.21□□□□□ -2.06
CMSS1-207ENST00000494412 KMT2BQ9UMN6 2715 aaPredicted RBP2.21□□□□□ -2.06
CMSS1-207ENST00000494412 TRAV26-2A0A0B4J265 109 aa2.21□□□□□ -2.06
CMSS1-207ENST00000494412 A0A1W2PNM2 257 aa2.21□□□□□ -2.06
CMSS1-207ENST00000494412 ZNF878C9JN71 531 aa2.21□□□□□ -2.06
CMSS1-207ENST00000494412 G3V3Q6 166 aa2.21□□□□□ -2.06
CMSS1-207ENST00000494412 H3BPC8 53 aa2.21□□□□□ -2.06
CMSS1-207ENST00000494412 OR7C1O76099 320 aaPredicted RBP2.21□□□□□ -2.06
CMSS1-207ENST00000494412 NPYP01303 97 aa2.21□□□□□ -2.06
CMSS1-207ENST00000494412 G0S2P27469 103 aa2.21□□□□□ -2.06
CMSS1-207ENST00000494412 CSN1S1P47710 185 aa2.21□□□□□ -2.06
CMSS1-207ENST00000494412 SERPINB9P50453 376 aa2.21□□□□□ -2.06
CMSS1-207ENST00000494412 FXYD7P58549 80 aa2.21□□□□□ -2.06
CMSS1-207ENST00000494412 KRTAP13-3Q3SY46 172 aa2.21□□□□□ -2.06
CMSS1-207ENST00000494412 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.21□□□□□ -2.06
CMSS1-207ENST00000494412 Q6ZS49 121 aa2.21□□□□□ -2.06
CMSS1-207ENST00000494412 STX12Q86Y82 276 aa2.21□□□□□ -2.06
CMSS1-207ENST00000494412 NAV2Q8IVL1 2488 aa2.21□□□□□ -2.06
CMSS1-207ENST00000494412 OR51A2Q8NGJ7 313 aa2.21□□□□□ -2.06
CMSS1-207ENST00000494412 OR4X1Q8NH49 305 aa2.21□□□□□ -2.06
CMSS1-207ENST00000494412 CLDND2Q8NHS1 167 aa2.21□□□□□ -2.06
CMSS1-207ENST00000494412 ACOT12Q8WYK0 555 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms