RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 NDUFB2O95178 105 aa4.62□□□□□ -1.67
SNX13-210ENST00000494402 GPX1P07203 203 aa4.62□□□□□ -1.67
SNX13-210ENST00000494402 CGB3P0DN86 165 aa4.62□□□□□ -1.67
SNX13-210ENST00000494402 CGB7P0DN87 165 aa4.62□□□□□ -1.67
SNX13-210ENST00000494402 AZU1P20160 251 aa4.62□□□□□ -1.67
SNX13-210ENST00000494402 SRP14P37108 136 aaKnown RBP4.62□□□□□ -1.67
SNX13-210ENST00000494402 RPL27AP46776 148 aaKnown RBP4.62□□□□□ -1.67
SNX13-210ENST00000494402 TSPEAR-AS2P59090 65 aa4.62□□□□□ -1.67
SNX13-210ENST00000494402 YPEL3P61236 119 aaPredicted RBP4.62□□□□□ -1.67
SNX13-210ENST00000494402 TMEM244Q5VVB8 128 aa4.62□□□□□ -1.67
SNX13-210ENST00000494402 ZNF329Q86UD4 541 aa4.62□□□□□ -1.67
SNX13-210ENST00000494402 MMGT1Q8N4V1 131 aa4.62□□□□□ -1.67
SNX13-210ENST00000494402 OR4E2Q8NGC2 313 aa4.62□□□□□ -1.67
SNX13-210ENST00000494402 LINC01560Q8TB33 94 aa4.62□□□□□ -1.67
SNX13-210ENST00000494402 ZNF418Q8TF45 676 aaPredicted RBP4.62□□□□□ -1.67
SNX13-210ENST00000494402 DCANP1Q8TF63 244 aa4.62□□□□□ -1.67
SNX13-210ENST00000494402 MAGOHBQ96A72 148 aaKnown RBP4.62□□□□□ -1.67
SNX13-210ENST00000494402 TMEM133Q9H2Q1 129 aa4.62□□□□□ -1.67
SNX13-210ENST00000494402 XAGE1AQ9HD64 81 aa4.62□□□□□ -1.67
SNX13-210ENST00000494402 SLC39A9Q9NUM3 307 aa4.62□□□□□ -1.67
SNX13-210ENST00000494402 SNX12Q9UMY4 172 aa4.62□□□□□ -1.67
SNX13-210ENST00000494402 PLXNB3Q9ULL4 1909 aa4.62□□□□□ -1.67
SNX13-210ENST00000494402 TRBV7-6A0A0J9YX20 115 aa4.61□□□□□ -1.67
SNX13-210ENST00000494402 LOC107984640A0A0U1RRK4 108 aa4.61□□□□□ -1.67
SNX13-210ENST00000494402 C11orf94C9JXX5 98 aa4.61□□□□□ -1.67
SNX13-210ENST00000494402 CORTO00230 105 aa4.61□□□□□ -1.67
SNX13-210ENST00000494402 PGLYRP1O75594 196 aaPredicted RBP4.61□□□□□ -1.67
SNX13-210ENST00000494402 MT-ND4LP03901 98 aa4.61□□□□□ -1.67
SNX13-210ENST00000494402 IGHV3-30-3P0DP02 117 aa4.61□□□□□ -1.67
SNX13-210ENST00000494402 NANOS3P60323 173 aaKnown RBP4.61□□□□□ -1.67
SNX13-210ENST00000494402 EIF5AP63241 154 aaKnown RBP4.61□□□□□ -1.67
SNX13-210ENST00000494402 OR8G1Q15617 311 aa4.61□□□□□ -1.67
SNX13-210ENST00000494402 C15orf32Q32M92 178 aa4.61□□□□□ -1.67
SNX13-210ENST00000494402 TRAPPC6BQ86SZ2 158 aa4.61□□□□□ -1.67
SNX13-210ENST00000494402 CTAGE3PQ8IX95 158 aa4.61□□□□□ -1.67
SNX13-210ENST00000494402 ZNF101Q8IZC7 436 aa4.61□□□□□ -1.67
SNX13-210ENST00000494402 ZFP62Q8NB50 900 aaPredicted RBP4.61□□□□□ -1.67
SNX13-210ENST00000494402 FNDC9Q8TBE3 224 aa4.61□□□□□ -1.67
SNX13-210ENST00000494402 TNFSF18Q9UNG2 199 aa4.61□□□□□ -1.67
SNX13-210ENST00000494402 ZNF835Q9Y2P0 537 aa4.61□□□□□ -1.67
SNX13-210ENST00000494402 ARHGEF11O15085 1522 aa4.61□□□□□ -1.67
SNX13-210ENST00000494402 KIF13BQ9NQT8 1826 aa4.6□□□□□ -1.67
SNX13-210ENST00000494402 IGHV1-58A0A0C4DH39 117 aa4.6□□□□□ -1.67
SNX13-210ENST00000494402 HIST1H4AP62805 103 aaKnown RBP4.6□□□□□ -1.67
SNX13-210ENST00000494402 SPANXN3Q5MJ09 141 aa4.6□□□□□ -1.67
SNX13-210ENST00000494402 SPATA12Q7Z6I5 190 aa4.6□□□□□ -1.67
SNX13-210ENST00000494402 RNF175Q8N4F7 328 aa4.6□□□□□ -1.67
SNX13-210ENST00000494402 TCTEX1D1Q8N7M0 179 aa4.6□□□□□ -1.67
SNX13-210ENST00000494402 HIST1H2BAQ96A08 127 aa4.6□□□□□ -1.67
SNX13-210ENST00000494402 CBLN4Q9NTU7 201 aa4.6□□□□□ -1.67
SNX13-210ENST00000494402 BAIAP2Q9UQB8 552 aa4.6□□□□□ -1.67
SNX13-210ENST00000494402 FAM135BQ49AJ0 1406 aa4.6□□□□□ -1.67
SNX13-210ENST00000494402 NOTCH4Q99466 2003 aa4.6□□□□□ -1.67
SNX13-210ENST00000494402 LY6LH3BQJ8 138 aa4.59□□□□□ -1.67
SNX13-210ENST00000494402 NCR2O95944 276 aa4.59□□□□□ -1.67
SNX13-210ENST00000494402 C1QAP02745 245 aa4.59□□□□□ -1.67
SNX13-210ENST00000494402 IGLC6P0CF74 106 aa4.59□□□□□ -1.67
SNX13-210ENST00000494402 LINC00694P0DN24 101 aa4.59□□□□□ -1.67
SNX13-210ENST00000494402 FABP2P12104 132 aa4.59□□□□□ -1.67
SNX13-210ENST00000494402 PSMB8P28062 276 aa4.59□□□□□ -1.67
SNX13-210ENST00000494402 CRIP2P52943 208 aaPredicted RBP4.59□□□□□ -1.67
SNX13-210ENST00000494402 TMBIM6P55061 237 aa4.59□□□□□ -1.67
SNX13-210ENST00000494402 UBE2BP63146 152 aa4.59□□□□□ -1.67
SNX13-210ENST00000494402 IGLV3-21P80748 117 aaPredicted RBP4.59□□□□□ -1.67
SNX13-210ENST00000494402 RPL18Q07020 188 aaKnown RBP4.59□□□□□ -1.67
SNX13-210ENST00000494402 UBE2SQ16763 222 aa4.59□□□□□ -1.67
SNX13-210ENST00000494402 LINC01554Q52M75 96 aa4.59□□□□□ -1.67
SNX13-210ENST00000494402 TMEM14EPQ6UXP3 125 aa4.59□□□□□ -1.67
SNX13-210ENST00000494402 LINC00305Q7Z4B0 112 aa4.59□□□□□ -1.67
SNX13-210ENST00000494402 CD177Q8N6Q3 437 aa4.59□□□□□ -1.67
SNX13-210ENST00000494402 STAG3L4Q8TBR4 150 aa4.59□□□□□ -1.67
SNX13-210ENST00000494402 IMMP1LQ96LU5 166 aa4.59□□□□□ -1.67
SNX13-210ENST00000494402 ARHGAP23Q9P227 1491 aa4.59□□□□□ -1.67
SNX13-210ENST00000494402 RNF11Q9Y3C5 154 aa4.59□□□□□ -1.67
SNX13-210ENST00000494402 LINC00588Q9Y4M8 146 aa4.59□□□□□ -1.67
SNX13-210ENST00000494402 PCNX3Q9H6A9 2034 aa4.58□□□□□ -1.68
SNX13-210ENST00000494402 TICRRQ7Z2Z1 1910 aa4.58□□□□□ -1.68
SNX13-210ENST00000494402 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.58□□□□□ -1.68
SNX13-210ENST00000494402 TRAPPC8Q9Y2L5 1435 aa4.58□□□□□ -1.68
SNX13-210ENST00000494402 IGLV3-10A0A075B6K4 115 aa4.58□□□□□ -1.68
SNX13-210ENST00000494402 A0A0D9SEW6 157 aa4.58□□□□□ -1.68
SNX13-210ENST00000494402 A6NED7 52 aa4.58□□□□□ -1.68
SNX13-210ENST00000494402 TMEM212A6NML5 194 aa4.58□□□□□ -1.68
SNX13-210ENST00000494402 A8MWP4 228 aa4.58□□□□□ -1.68
SNX13-210ENST00000494402 C19orf84I3L1E1 186 aa4.58□□□□□ -1.68
SNX13-210ENST00000494402 TMEM256-PLSCR3K7ERE1 68 aa4.58□□□□□ -1.68
SNX13-210ENST00000494402 LEPROTO15243 131 aa4.58□□□□□ -1.68
SNX13-210ENST00000494402 NAPSAO96009 420 aa4.58□□□□□ -1.68
SNX13-210ENST00000494402 CSRP1P21291 193 aaKnown RBP4.58□□□□□ -1.68
SNX13-210ENST00000494402 AKR1D1P51857 326 aa4.58□□□□□ -1.68
SNX13-210ENST00000494402 PPP3R1P63098 170 aa4.58□□□□□ -1.68
SNX13-210ENST00000494402 MEF2BQ02080 365 aaPredicted RBP4.58□□□□□ -1.68
SNX13-210ENST00000494402 SCIMPQ6UWF3 145 aa4.58□□□□□ -1.68
SNX13-210ENST00000494402 Q6ZTC4 211 aa4.58□□□□□ -1.68
SNX13-210ENST00000494402 OR8D4Q8NGM9 314 aa4.58□□□□□ -1.68
SNX13-210ENST00000494402 RBPMSQ93062 196 aaKnown RBP4.58□□□□□ -1.68
SNX13-210ENST00000494402 YPEL2Q96QA6 119 aa4.58□□□□□ -1.68
SNX13-210ENST00000494402 MGLLQ99685 303 aa4.58□□□□□ -1.68
SNX13-210ENST00000494402 PSMG3Q9BT73 122 aaPredicted RBP4.58□□□□□ -1.68
SNX13-210ENST00000494402 C11orf1Q9H5F2 150 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms