RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 ADAP1O75689 374 aa10.37□□□□□ -0.75
COL1A1-208ENST00000494334 H2AFB2P0C5Z0 115 aa10.37□□□□□ -0.75
COL1A1-208ENST00000494334 RNASE2P10153 161 aaKnown RBP10.37□□□□□ -0.75
COL1A1-208ENST00000494334 SLC25A6P12236 298 aa10.37□□□□□ -0.75
COL1A1-208ENST00000494334 SYNJ2BPP57105 145 aa10.37□□□□□ -0.75
COL1A1-208ENST00000494334 DEFA6Q01524 100 aa10.37□□□□□ -0.75
COL1A1-208ENST00000494334 TNFRSF9Q07011 255 aa10.37□□□□□ -0.75
COL1A1-208ENST00000494334 BSXQ3C1V8 233 aa10.37□□□□□ -0.75
COL1A1-208ENST00000494334 C9orf66Q5T8R8 295 aa10.37□□□□□ -0.75
COL1A1-208ENST00000494334 OR1S1Q8NH92 325 aa10.37□□□□□ -0.75
COL1A1-208ENST00000494334 MISP3Q96FF7 219 aa10.37□□□□□ -0.75
COL1A1-208ENST00000494334 GPR61Q9BZJ8 451 aa10.37□□□□□ -0.75
COL1A1-208ENST00000494334 HSPB7Q9UBY9 170 aa10.37□□□□□ -0.75
COL1A1-208ENST00000494334 I3L2K1 104 aa10.36□□□□□ -0.75
COL1A1-208ENST00000494334 WIPF1O43516 503 aa10.36□□□□□ -0.75
COL1A1-208ENST00000494334 GGCTO75223 188 aaKnown RBP10.36□□□□□ -0.75
COL1A1-208ENST00000494334 OR2C1O95371 312 aa10.36□□□□□ -0.75
COL1A1-208ENST00000494334 MT-CO2P00403 227 aa10.36□□□□□ -0.75
COL1A1-208ENST00000494334 GPR183P32249 361 aa10.36□□□□□ -0.75
COL1A1-208ENST00000494334 ARL3P36405 182 aa10.36□□□□□ -0.75
COL1A1-208ENST00000494334 SUB1P53999 127 aaKnown RBP eCLIP10.36□□□□□ -0.75
COL1A1-208ENST00000494334 TATDN3Q17R31 274 aa10.36□□□□□ -0.75
COL1A1-208ENST00000494334 C11orf87Q6NUJ2 197 aa10.36□□□□□ -0.75
COL1A1-208ENST00000494334 ACSM6Q6P461 480 aa10.36□□□□□ -0.75
COL1A1-208ENST00000494334 NRARPQ7Z6K4 114 aa10.36□□□□□ -0.75
COL1A1-208ENST00000494334 DUSP18Q8NEJ0 188 aa10.36□□□□□ -0.75
COL1A1-208ENST00000494334 ENKURQ8TC29 256 aa10.36□□□□□ -0.75
COL1A1-208ENST00000494334 MITD1Q8WV92 249 aa10.36□□□□□ -0.75
COL1A1-208ENST00000494334 PINX1Q96BK5 328 aaKnown RBP10.36□□□□□ -0.75
COL1A1-208ENST00000494334 RBKSQ9H477 322 aa10.36□□□□□ -0.75
COL1A1-208ENST00000494334 HEYLQ9NQ87 328 aaPredicted RBP10.36□□□□□ -0.75
COL1A1-208ENST00000494334 ZC4H2Q9NQZ6 224 aa10.36□□□□□ -0.75
COL1A1-208ENST00000494334 C21orf62Q9NYP8 219 aa10.36□□□□□ -0.75
COL1A1-208ENST00000494334 NBEAL1Q6ZS30 2694 aa10.36□□□□□ -0.75
COL1A1-208ENST00000494334 MPTX1A8MV57 137 aa10.35□□□□□ -0.75
COL1A1-208ENST00000494334 F8W735 103 aaPredicted RBP10.35□□□□□ -0.75
COL1A1-208ENST00000494334 HTR2BP41595 481 aa10.35□□□□□ -0.75
COL1A1-208ENST00000494334 INSL3P51460 131 aa10.35□□□□□ -0.75
COL1A1-208ENST00000494334 KRTAP10-11P60412 298 aa10.35□□□□□ -0.75
COL1A1-208ENST00000494334 EGFEM1PQ0D2K5 195 aa10.35□□□□□ -0.75
COL1A1-208ENST00000494334 OR9G4Q8NGQ1 327 aa10.35□□□□□ -0.75
COL1A1-208ENST00000494334 DTD1Q8TEA8 209 aa10.35□□□□□ -0.75
COL1A1-208ENST00000494334 SEC22CQ9BRL7 303 aa10.35□□□□□ -0.75
COL1A1-208ENST00000494334 HIPK2Q9H2X6 1198 aa10.35□□□□□ -0.75
COL1A1-208ENST00000494334 OR2T8A6NH00 312 aa10.34□□□□□ -0.75
COL1A1-208ENST00000494334 TGOLN2O43493 480 aa10.34□□□□□ -0.75
COL1A1-208ENST00000494334 SAP30O75446 220 aa10.34□□□□□ -0.75
COL1A1-208ENST00000494334 IFNA21P01568 189 aa10.34□□□□□ -0.75
COL1A1-208ENST00000494334 IGHV3-48P01763 117 aa10.34□□□□□ -0.75
COL1A1-208ENST00000494334 PRB2P02812 416 aaPredicted RBP10.34□□□□□ -0.75
COL1A1-208ENST00000494334 DEFA1P59665 94 aa10.34□□□□□ -0.75
COL1A1-208ENST00000494334 DEFA3P59666 94 aa10.34□□□□□ -0.75
COL1A1-208ENST00000494334 C2orf83Q53S99 150 aa10.34□□□□□ -0.75
COL1A1-208ENST00000494334 PLET1Q6UQ28 207 aa10.34□□□□□ -0.75
COL1A1-208ENST00000494334 IL34Q6ZMJ4 242 aa10.34□□□□□ -0.75
COL1A1-208ENST00000494334 GPHB5Q86YW7 130 aa10.34□□□□□ -0.75
COL1A1-208ENST00000494334 UBAC2Q8NBM4 344 aa10.34□□□□□ -0.75
COL1A1-208ENST00000494334 ZNF431Q8TF32 576 aaPredicted RBP10.34□□□□□ -0.75
COL1A1-208ENST00000494334 TMEM170AQ8WVE7 144 aa10.34□□□□□ -0.75
COL1A1-208ENST00000494334 ATP6V0BQ99437 205 aa10.34□□□□□ -0.75
COL1A1-208ENST00000494334 FAM90A26D6RGX4 464 aa10.33□□□□□ -0.76
COL1A1-208ENST00000494334 CORTO00230 105 aa10.33□□□□□ -0.76
COL1A1-208ENST00000494334 FCGR2BP31994 310 aaPredicted RBP10.33□□□□□ -0.76
COL1A1-208ENST00000494334 MFAP4P55083 255 aa10.33□□□□□ -0.76
COL1A1-208ENST00000494334 MLANAQ16655 118 aa10.33□□□□□ -0.76
COL1A1-208ENST00000494334 Q56UQ5 140 aa10.33□□□□□ -0.76
COL1A1-208ENST00000494334 SLC24A4Q8NFF2 622 aa10.33□□□□□ -0.76
COL1A1-208ENST00000494334 BSCL2Q96G97 398 aaPredicted RBP10.33□□□□□ -0.76
COL1A1-208ENST00000494334 OR4C12Q96R67 309 aa10.33□□□□□ -0.76
COL1A1-208ENST00000494334 CHRDL1Q9BU40 450 aa10.33□□□□□ -0.76
COL1A1-208ENST00000494334 ELOVL1Q9BW60 279 aa10.33□□□□□ -0.76
COL1A1-208ENST00000494334 FNDC4Q9H6D8 234 aaPredicted RBP10.33□□□□□ -0.76
COL1A1-208ENST00000494334 U3KQ87 197 aa10.33□□□□□ -0.76
COL1A1-208ENST00000494334 LGALS9O00182 355 aa10.32□□□□□ -0.76
COL1A1-208ENST00000494334 IFNA10P01566 189 aa10.32□□□□□ -0.76
COL1A1-208ENST00000494334 IL5P05113 134 aa10.32□□□□□ -0.76
COL1A1-208ENST00000494334 CSN3P07498 182 aa10.32□□□□□ -0.76
COL1A1-208ENST00000494334 CTSGP08311 255 aa10.32□□□□□ -0.76
COL1A1-208ENST00000494334 ADMP35318 185 aa10.32□□□□□ -0.76
COL1A1-208ENST00000494334 ID3Q02535 119 aa10.32□□□□□ -0.76
COL1A1-208ENST00000494334 FAM106AQ4KMX7 169 aa10.32□□□□□ -0.76
COL1A1-208ENST00000494334 SPSB3Q6PJ21 355 aa10.32□□□□□ -0.76
COL1A1-208ENST00000494334 C12orf45Q8N5I9 185 aaPredicted RBP10.32□□□□□ -0.76
COL1A1-208ENST00000494334 OR4D5Q8NGN0 318 aa10.32□□□□□ -0.76
COL1A1-208ENST00000494334 OR10C1Q96KK4 312 aa10.32□□□□□ -0.76
COL1A1-208ENST00000494334 TXN2Q99757 166 aa10.32□□□□□ -0.76
COL1A1-208ENST00000494334 MAGT1Q9H0U3 335 aa10.32□□□□□ -0.76
COL1A1-208ENST00000494334 PEMTQ9UBM1 199 aa10.32□□□□□ -0.76
COL1A1-208ENST00000494334 IGHV3-35A0A0C4DH35 117 aa10.31□□□□□ -0.76
COL1A1-208ENST00000494334 INMT-MINDY4F8WBC2 141 aa10.31□□□□□ -0.76
COL1A1-208ENST00000494334 SYNGR2O43760 224 aa10.31□□□□□ -0.76
COL1A1-208ENST00000494334 MED6O75586 246 aa10.31□□□□□ -0.76
COL1A1-208ENST00000494334 IAPPP10997 89 aa10.31□□□□□ -0.76
COL1A1-208ENST00000494334 NPY1RP25929 384 aa10.31□□□□□ -0.76
COL1A1-208ENST00000494334 OPRK1P41145 380 aa10.31□□□□□ -0.76
COL1A1-208ENST00000494334 REC114Q7Z4M0 266 aa10.31□□□□□ -0.76
COL1A1-208ENST00000494334 NOXA1Q86UR1 476 aa10.31□□□□□ -0.76
COL1A1-208ENST00000494334 UXS1Q8NBZ7 420 aa10.31□□□□□ -0.76
COL1A1-208ENST00000494334 RNASEH2CQ8TDP1 164 aaKnown RBP10.31□□□□□ -0.76
COL1A1-208ENST00000494334 ZNF436Q9C0F3 470 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms