RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 CEACAM8P31997 349 aaPredicted RBP9.4□□□□□ -0.9
RFC4-214ENST00000494047 ZNF83P51522 516 aa9.4□□□□□ -0.9
RFC4-214ENST00000494047 LGALS4P56470 323 aa9.4□□□□□ -0.9
RFC4-214ENST00000494047 CX3CL1P78423 397 aa9.4□□□□□ -0.9
RFC4-214ENST00000494047 LTC4SQ16873 150 aa9.4□□□□□ -0.9
RFC4-214ENST00000494047 SPINK9Q5DT21 86 aa9.4□□□□□ -0.9
RFC4-214ENST00000494047 FAM231DQ6ZW35 169 aa9.4□□□□□ -0.9
RFC4-214ENST00000494047 ABHD12Q8N2K0 398 aa9.4□□□□□ -0.9
RFC4-214ENST00000494047 ZNRF1Q8ND25 227 aa9.4□□□□□ -0.9
RFC4-214ENST00000494047 OR4P4Q8NGL7 312 aa9.4□□□□□ -0.9
RFC4-214ENST00000494047 OCC1Q8TAD7 63 aa9.4□□□□□ -0.9
RFC4-214ENST00000494047 ZNF596Q8TC21 504 aa9.4□□□□□ -0.9
RFC4-214ENST00000494047 GAFA1Q96PS6 74 aa9.4□□□□□ -0.9
RFC4-214ENST00000494047 NAGKQ9UJ70 344 aa9.4□□□□□ -0.9
RFC4-214ENST00000494047 CDC42EP3Q9UKI2 254 aa9.4□□□□□ -0.9
RFC4-214ENST00000494047 FZR1Q9UM11 496 aa9.4□□□□□ -0.9
RFC4-214ENST00000494047 GTF3C1Q12789 2109 aa9.4□□□□□ -0.91
RFC4-214ENST00000494047 TENM4Q6N022 2769 aa9.39□□□□□ -0.91
RFC4-214ENST00000494047 SPTBN1Q01082 2364 aaKnown RBP9.39□□□□□ -0.91
RFC4-214ENST00000494047 IGHV3-64DA0A0J9YX35 117 aa9.39□□□□□ -0.91
RFC4-214ENST00000494047 GNLYP22749 145 aa9.39□□□□□ -0.91
RFC4-214ENST00000494047 BRS3P32247 399 aa9.39□□□□□ -0.91
RFC4-214ENST00000494047 PPOXP50336 477 aa9.39□□□□□ -0.91
RFC4-214ENST00000494047 ZNF134P52741 427 aa9.39□□□□□ -0.91
RFC4-214ENST00000494047 RPL8P62917 257 aaKnown RBP9.39□□□□□ -0.91
RFC4-214ENST00000494047 PAX2Q02962 417 aa9.39□□□□□ -0.91
RFC4-214ENST00000494047 PSG5Q15238 335 aa9.39□□□□□ -0.91
RFC4-214ENST00000494047 MMD2Q8IY49 270 aa9.39□□□□□ -0.91
RFC4-214ENST00000494047 OR5AU1Q8NGC0 362 aa9.39□□□□□ -0.91
RFC4-214ENST00000494047 OR5AN1Q8NGI8 311 aa9.39□□□□□ -0.91
RFC4-214ENST00000494047 OR10X1Q8NGY0 326 aa9.39□□□□□ -0.91
RFC4-214ENST00000494047 TMEM167AQ8TBQ9 72 aa9.39□□□□□ -0.91
RFC4-214ENST00000494047 WIPF2Q8TF74 440 aaPredicted RBP9.39□□□□□ -0.91
RFC4-214ENST00000494047 SSMEM1Q8WWF3 244 aa9.39□□□□□ -0.91
RFC4-214ENST00000494047 TMEM106BQ9NUM4 274 aa9.39□□□□□ -0.91
RFC4-214ENST00000494047 ZNF586Q9NXT0 402 aa9.39□□□□□ -0.91
RFC4-214ENST00000494047 YTHDF2Q9Y5A9 579 aaKnown RBP9.39□□□□□ -0.91
RFC4-214ENST00000494047 SOX21Q9Y651 276 aaPredicted RBP9.39□□□□□ -0.91
RFC4-214ENST00000494047 PTPN13Q12923 2485 aa9.39□□□□□ -0.91
RFC4-214ENST00000494047 DOCK11Q5JSL3 2073 aa9.39□□□□□ -0.91
RFC4-214ENST00000494047 FLNCQ14315 2725 aa9.39□□□□□ -0.91
RFC4-214ENST00000494047 CACNA1DQ01668 2161 aa9.39□□□□□ -0.91
RFC4-214ENST00000494047 TRBV23-1A0A0A0MS06 115 aa9.38□□□□□ -0.91
RFC4-214ENST00000494047 M0R143 59 aa9.38□□□□□ -0.91
RFC4-214ENST00000494047 FCN1O00602 326 aa9.38□□□□□ -0.91
RFC4-214ENST00000494047 SPRY3O43610 288 aa9.38□□□□□ -0.91
RFC4-214ENST00000494047 OR7C2O60412 319 aa9.38□□□□□ -0.91
RFC4-214ENST00000494047 SCGB1D1O95968 90 aa9.38□□□□□ -0.91
RFC4-214ENST00000494047 IGHV1-46P01743 117 aa9.38□□□□□ -0.91
RFC4-214ENST00000494047 AMY1AP04745 511 aa9.38□□□□□ -0.91
RFC4-214ENST00000494047 IGFBP2P18065 325 aa9.38□□□□□ -0.91
RFC4-214ENST00000494047 LGALS7P47929 136 aa9.38□□□□□ -0.91
RFC4-214ENST00000494047 ZNF137PP52743 207 aa9.38□□□□□ -0.91
RFC4-214ENST00000494047 VMA21Q3ZAQ7 101 aa9.38□□□□□ -0.91
RFC4-214ENST00000494047 PRR30Q53SZ7 412 aaPredicted RBP9.38□□□□□ -0.91
RFC4-214ENST00000494047 GCSAMLQ5JQS6 135 aa9.38□□□□□ -0.91
RFC4-214ENST00000494047 ATP5L2Q7Z4Y8 100 aa9.38□□□□□ -0.91
RFC4-214ENST00000494047 S100A7AQ86SG5 101 aa9.38□□□□□ -0.91
RFC4-214ENST00000494047 ZNF664Q8N3J9 261 aa9.38□□□□□ -0.91
RFC4-214ENST00000494047 OR5T1Q8NG75 326 aa9.38□□□□□ -0.91
RFC4-214ENST00000494047 OR4B1Q8NGF8 309 aa9.38□□□□□ -0.91
RFC4-214ENST00000494047 FAM57AQ8TBR7 257 aa9.38□□□□□ -0.91
RFC4-214ENST00000494047 FLYWCH2Q96CP2 140 aaKnown RBP9.38□□□□□ -0.91
RFC4-214ENST00000494047 HARBI1Q96MB7 349 aa9.38□□□□□ -0.91
RFC4-214ENST00000494047 C20orf144Q9BQM9 153 aa9.38□□□□□ -0.91
RFC4-214ENST00000494047 DCTN5Q9BTE1 182 aa9.38□□□□□ -0.91
RFC4-214ENST00000494047 MRPL18Q9H0U6 180 aaKnown RBP9.38□□□□□ -0.91
RFC4-214ENST00000494047 ZNF430Q9H8G1 570 aaPredicted RBP9.38□□□□□ -0.91
RFC4-214ENST00000494047 SEPSECSQ9HD40 501 aaKnown RBP9.38□□□□□ -0.91
RFC4-214ENST00000494047 SPENQ96T58 3664 aaKnown RBP9.38□□□□□ -0.91
RFC4-214ENST00000494047 TRBV20OR9-2A0A075B6H5 130 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 FSTL3O95633 263 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 LINC00869P0C866 280 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 RNASE2P10153 161 aaKnown RBP9.37□□□□□ -0.91
RFC4-214ENST00000494047 CD40P25942 277 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 ADMP35318 185 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 USF2Q15853 346 aaPredicted RBP9.37□□□□□ -0.91
RFC4-214ENST00000494047 LRRC10Q5BKY1 277 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 CENPWQ5EE01 88 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 BAGE3Q86Y29 109 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 BAGE2Q86Y30 109 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 OR1L6Q8NGR2 347 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 SLC25A33Q9BSK2 321 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 DERL1Q9BUN8 251 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 HEATR1Q9H583 2144 aaKnown RBP9.37□□□□□ -0.91
RFC4-214ENST00000494047 NDUFA4L2Q9NRX3 87 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 MRPL27Q9P0M9 148 aaKnown RBP9.37□□□□□ -0.91
RFC4-214ENST00000494047 V9GYV3 84 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 DIDO1Q9BTC0 2240 aaKnown RBP9.37□□□□□ -0.91
RFC4-214ENST00000494047 INTS1Q8N201 2190 aaKnown RBP9.37□□□□□ -0.91
RFC4-214ENST00000494047 IGHV3OR15-7A0A075B7D8 119 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 TRAV3A0A0B4J244 114 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 TEX50A0A1B0GTY4 177 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 SNURFLB1AK76 121 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 C3orf80F5H4A9 247 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 SAA1P0DJI8 122 aaPredicted RBP9.37□□□□□ -0.91
RFC4-214ENST00000494047 CT45A6P0DMU7 189 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 CT45A5P0DMU8 189 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 CT45A7P0DMV0 189 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 HIST1H1EP10412 219 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms