RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 NUDT19A8MXV4 375 aa11.66□□□□□ -0.54
ACTB-213ENST00000493945 MPC2O95563 127 aa11.66□□□□□ -0.54
ACTB-213ENST00000493945 RNASE2P10153 161 aaKnown RBP11.66□□□□□ -0.54
ACTB-213ENST00000493945 SLC25A4P12235 298 aa11.66□□□□□ -0.54
ACTB-213ENST00000493945 BSXQ3C1V8 233 aa11.66□□□□□ -0.54
ACTB-213ENST00000493945 PRSS54Q6PEW0 395 aa11.66□□□□□ -0.54
ACTB-213ENST00000493945 AKAP14Q86UN6 197 aa11.66□□□□□ -0.54
ACTB-213ENST00000493945 OR2T35Q8NGX2 323 aa11.66□□□□□ -0.54
ACTB-213ENST00000493945 VN1R17PQ8TDU5 208 aa11.66□□□□□ -0.54
ACTB-213ENST00000493945 PINX1Q96BK5 328 aaKnown RBP11.66□□□□□ -0.54
ACTB-213ENST00000493945 UBE2E2Q96LR5 201 aa11.66□□□□□ -0.54
ACTB-213ENST00000493945 MS4A10Q96PG2 267 aa11.66□□□□□ -0.54
ACTB-213ENST00000493945 ATP6V0BQ99437 205 aa11.66□□□□□ -0.54
ACTB-213ENST00000493945 ZC4H2Q9NQZ6 224 aa11.66□□□□□ -0.54
ACTB-213ENST00000493945 ZFHX3Q15911 3703 aa11.66□□□□□ -0.54
ACTB-213ENST00000493945 TRBV7-1A0A0A6YYK4 115 aa11.65□□□□□ -0.54
ACTB-213ENST00000493945 TRBV9A0A0B4J1U6 114 aa11.65□□□□□ -0.54
ACTB-213ENST00000493945 OR2J3O76001 311 aa11.65□□□□□ -0.54
ACTB-213ENST00000493945 P2RY1P47900 373 aa11.65□□□□□ -0.54
ACTB-213ENST00000493945 CD83Q01151 205 aa11.65□□□□□ -0.54
ACTB-213ENST00000493945 BAXQ07812 192 aa11.65□□□□□ -0.54
ACTB-213ENST00000493945 IL15RAQ13261 267 aa11.65□□□□□ -0.54
ACTB-213ENST00000493945 KLK9Q2XQG4 91 aa11.65□□□□□ -0.54
ACTB-213ENST00000493945 C15orf32Q32M92 178 aa11.65□□□□□ -0.54
ACTB-213ENST00000493945 SHISA2Q6UWI4 295 aa11.65□□□□□ -0.54
ACTB-213ENST00000493945 ETV3LQ6ZN32 361 aa11.65□□□□□ -0.54
ACTB-213ENST00000493945 NDUFA11Q86Y39 141 aa11.65□□□□□ -0.54
ACTB-213ENST00000493945 OR10P1Q8NGE3 313 aa11.65□□□□□ -0.54
ACTB-213ENST00000493945 SLC35E1Q96K37 410 aa11.65□□□□□ -0.54
ACTB-213ENST00000493945 LYRM2Q9NU23 88 aaPredicted RBP11.65□□□□□ -0.54
ACTB-213ENST00000493945 KLK9Q9UKQ9 250 aa11.65□□□□□ -0.54
ACTB-213ENST00000493945 H3BP45 60 aa11.64□□□□□ -0.55
ACTB-213ENST00000493945 SOX15O60248 233 aa11.64□□□□□ -0.55
ACTB-213ENST00000493945 CCNKO75909 580 aa11.64□□□□□ -0.55
ACTB-213ENST00000493945 CDX1P47902 265 aaPredicted RBP11.64□□□□□ -0.55
ACTB-213ENST00000493945 NPBWR1P48145 328 aa11.64□□□□□ -0.55
ACTB-213ENST00000493945 KRTAP21-3Q3LHN1 58 aa11.64□□□□□ -0.55
ACTB-213ENST00000493945 INO80EQ8NBZ0 244 aaPredicted RBP11.64□□□□□ -0.55
ACTB-213ENST00000493945 WIPF2Q8TF74 440 aaPredicted RBP11.64□□□□□ -0.55
ACTB-213ENST00000493945 CHAC2Q8WUX2 184 aa11.64□□□□□ -0.55
ACTB-213ENST00000493945 CACNG8Q8WXS5 425 aa11.64□□□□□ -0.55
ACTB-213ENST00000493945 TAF15Q92804 592 aaKnown RBP eCLIP11.64□□□□□ -0.55
ACTB-213ENST00000493945 ZNF747Q9BV97 191 aa11.64□□□□□ -0.55
ACTB-213ENST00000493945 PRH1P02810 166 aa11.63□□□□□ -0.55
ACTB-213ENST00000493945 RPLP1P05386 114 aaKnown RBP11.63□□□□□ -0.55
ACTB-213ENST00000493945 FABP1P07148 127 aa11.63□□□□□ -0.55
ACTB-213ENST00000493945 GPX4P36969 197 aaPredicted RBP11.63□□□□□ -0.55
ACTB-213ENST00000493945 MFAP4P55083 255 aa11.63□□□□□ -0.55
ACTB-213ENST00000493945 C11orf87Q6NUJ2 197 aa11.63□□□□□ -0.55
ACTB-213ENST00000493945 LILRB2Q8N423 598 aa11.63□□□□□ -0.55
ACTB-213ENST00000493945 KLHL30-AS1Q8NEE0 82 aa11.63□□□□□ -0.55
ACTB-213ENST00000493945 C4orf3Q8WVX3 66 aa11.63□□□□□ -0.55
ACTB-213ENST00000493945 TXN2Q99757 166 aa11.63□□□□□ -0.55
ACTB-213ENST00000493945 C21orf62Q9NYP8 219 aa11.63□□□□□ -0.55
ACTB-213ENST00000493945 MBD2Q9UBB5 411 aa11.63□□□□□ -0.55
ACTB-213ENST00000493945 MT-CO2P00403 227 aa11.62□□□□□ -0.55
ACTB-213ENST00000493945 LGALS1P09382 135 aaKnown RBP11.62□□□□□ -0.55
ACTB-213ENST00000493945 CD28P10747 220 aa11.62□□□□□ -0.55
ACTB-213ENST00000493945 SULT1A1P50225 295 aa11.62□□□□□ -0.55
ACTB-213ENST00000493945 Q56UQ5 140 aa11.62□□□□□ -0.55
ACTB-213ENST00000493945 ACSM6Q6P461 480 aa11.62□□□□□ -0.55
ACTB-213ENST00000493945 SLC16A13Q7RTY0 426 aa11.62□□□□□ -0.55
ACTB-213ENST00000493945 ZNF491Q8N8L2 437 aa11.62□□□□□ -0.55
ACTB-213ENST00000493945 OR4F17Q8NGA8 305 aa11.62□□□□□ -0.55
ACTB-213ENST00000493945 MYOZ3Q8TDC0 251 aa11.62□□□□□ -0.55
ACTB-213ENST00000493945 FANCD2OSQ96PS1 177 aa11.62□□□□□ -0.55
ACTB-213ENST00000493945 OR4F4Q96R69 305 aa11.62□□□□□ -0.55
ACTB-213ENST00000493945 GGACTQ9BVM4 153 aa11.62□□□□□ -0.55
ACTB-213ENST00000493945 CUBNO60494 3623 aa11.62□□□□□ -0.55
ACTB-213ENST00000493945 TRAV30A0A087WSZ9 112 aa11.61□□□□□ -0.55
ACTB-213ENST00000493945 FXYD6-FXYD2A0A087WZ82 144 aa11.61□□□□□ -0.55
ACTB-213ENST00000493945 C15orf62A8K5M9 175 aa11.61□□□□□ -0.55
ACTB-213ENST00000493945 GNG7O60262 68 aa11.61□□□□□ -0.55
ACTB-213ENST00000493945 S100A11P31949 105 aa11.61□□□□□ -0.55
ACTB-213ENST00000493945 CD69Q07108 199 aa11.61□□□□□ -0.55
ACTB-213ENST00000493945 ATP6V1FQ16864 119 aa11.61□□□□□ -0.55
ACTB-213ENST00000493945 PVRIGQ6DKI7 326 aa11.61□□□□□ -0.55
ACTB-213ENST00000493945 OR8G2PQ6IF36 304 aa11.61□□□□□ -0.55
ACTB-213ENST00000493945 SPSB3Q6PJ21 355 aa11.61□□□□□ -0.55
ACTB-213ENST00000493945 TMEM14EPQ6UXP3 125 aa11.61□□□□□ -0.55
ACTB-213ENST00000493945 DPF1Q92782 380 aa11.61□□□□□ -0.55
ACTB-213ENST00000493945 CITED1Q99966 193 aa11.61□□□□□ -0.55
ACTB-213ENST00000493945 CITED2Q99967 270 aaPredicted RBP11.61□□□□□ -0.55
ACTB-213ENST00000493945 RANGRFQ9HD47 186 aaPredicted RBP11.61□□□□□ -0.55
ACTB-213ENST00000493945 FNDC10F2Z333 226 aa11.6□□□□□ -0.55
ACTB-213ENST00000493945 M0QZ24 198 aa11.6□□□□□ -0.55
ACTB-213ENST00000493945 NUPL2O15504 423 aaKnown RBP11.6□□□□□ -0.55
ACTB-213ENST00000493945 METTL15P1P0C7V9 234 aa11.6□□□□□ -0.55
ACTB-213ENST00000493945 ZP3P21754 424 aa11.6□□□□□ -0.55
ACTB-213ENST00000493945 FCGR2BP31994 310 aaPredicted RBP11.6□□□□□ -0.55
ACTB-213ENST00000493945 DLK1P80370 383 aa11.6□□□□□ -0.55
ACTB-213ENST00000493945 RUNX1Q01196 453 aa11.6□□□□□ -0.55
ACTB-213ENST00000493945 AKR1C1Q04828 323 aa11.6□□□□□ -0.55
ACTB-213ENST00000493945 C10orf99Q6UWK7 81 aa11.6□□□□□ -0.55
ACTB-213ENST00000493945 TCTE3Q8IZS6 198 aa11.6□□□□□ -0.55
ACTB-213ENST00000493945 TMEM252Q8N6L7 170 aa11.6□□□□□ -0.55
ACTB-213ENST00000493945 C11orf44Q8N8P7 122 aa11.6□□□□□ -0.55
ACTB-213ENST00000493945 UBAC2Q8NBM4 344 aa11.6□□□□□ -0.55
ACTB-213ENST00000493945 OR1S2Q8NGQ3 325 aa11.6□□□□□ -0.55
ACTB-213ENST00000493945 SCARB1Q8WTV0 552 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms