RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 ATP1A1-AS1Q5TC04 95 aa16.85■□□□□ 0.29
RNF40-203ENST00000493683 UBE2CO00762 179 aa16.84■□□□□ 0.29
RNF40-203ENST00000493683 ORMDL2Q53FV1 153 aa16.84■□□□□ 0.29
RNF40-203ENST00000493683 MRPL14Q6P1L8 145 aaKnown RBP16.84■□□□□ 0.29
RNF40-203ENST00000493683 ST20Q9HBF5 79 aa16.84■□□□□ 0.29
RNF40-203ENST00000493683 SAA2-SAA4A0A096LPE2 208 aa16.84■□□□□ 0.29
RNF40-203ENST00000493683 SAA2P0DJI9 122 aaPredicted RBP16.84■□□□□ 0.29
RNF40-203ENST00000493683 J3QRE1 110 aa16.83■□□□□ 0.29
RNF40-203ENST00000493683 ADMP35318 185 aa16.83■□□□□ 0.29
RNF40-203ENST00000493683 A0A1B0GW64 132 aa16.83■□□□□ 0.29
RNF40-203ENST00000493683 DPM2O94777 84 aa16.83■□□□□ 0.29
RNF40-203ENST00000493683 DUSP14O95147 198 aaKnown RBP16.83■□□□□ 0.29
RNF40-203ENST00000493683 IGKV3-20P01619 116 aa16.83■□□□□ 0.29
RNF40-203ENST00000493683 CELA3AP09093 270 aa16.83■□□□□ 0.29
RNF40-203ENST00000493683 IFI27P40305 119 aaPredicted RBP16.83■□□□□ 0.29
RNF40-203ENST00000493683 ATRAIDQ6UW56 229 aa16.83■□□□□ 0.29
RNF40-203ENST00000493683 TNFRSF14Q92956 283 aa16.83■□□□□ 0.29
RNF40-203ENST00000493683 LOC102723996A0A087X1L8 192 aa16.83■□□□□ 0.28
RNF40-203ENST00000493683 PRCDQ00LT1 54 aa16.83■□□□□ 0.28
RNF40-203ENST00000493683 ZNF257Q9Y2Q1 563 aa16.83■□□□□ 0.28
RNF40-203ENST00000493683 BSPH1Q075Z2 132 aa16.83■□□□□ 0.28
RNF40-203ENST00000493683 FAM27E3Q08E93 113 aa16.83■□□□□ 0.28
RNF40-203ENST00000493683 FAM19A2Q8N3H0 131 aa16.83■□□□□ 0.28
RNF40-203ENST00000493683 LINC01560Q8TB33 94 aa16.83■□□□□ 0.28
RNF40-203ENST00000493683 IGHV3OR16-13A0A075B7E8 117 aa16.82■□□□□ 0.28
RNF40-203ENST00000493683 IGHV3-74A0A0B4J1X5 117 aa16.82■□□□□ 0.28
RNF40-203ENST00000493683 EPOPA6NHQ4 379 aa16.82■□□□□ 0.28
RNF40-203ENST00000493683 TRBV7-9A0A0J9YWB2 115 aa16.82■□□□□ 0.28
RNF40-203ENST00000493683 HAX1O00165 279 aa16.82■□□□□ 0.28
RNF40-203ENST00000493683 MORN2Q502X0 79 aa16.82■□□□□ 0.28
RNF40-203ENST00000493683 CFAP161Q6P656 301 aa16.82■□□□□ 0.28
RNF40-203ENST00000493683 SMPXQ9UHP9 88 aa16.82■□□□□ 0.28
RNF40-203ENST00000493683 WDR83OSQ9Y284 106 aa16.82■□□□□ 0.28
RNF40-203ENST00000493683 LINC00614P0C842 121 aa16.82■□□□□ 0.28
RNF40-203ENST00000493683 RNF125Q96EQ8 232 aa16.82■□□□□ 0.28
RNF40-203ENST00000493683 TRAV21A0A0B4J279 112 aa16.82■□□□□ 0.28
RNF40-203ENST00000493683 CA1P00915 261 aaPredicted RBP16.82■□□□□ 0.28
RNF40-203ENST00000493683 CLEC19AQ6UXS0 136 aa16.82■□□□□ 0.28
RNF40-203ENST00000493683 F2Z2F3 143 aa16.81■□□□□ 0.28
RNF40-203ENST00000493683 APOMO95445 188 aa16.81■□□□□ 0.28
RNF40-203ENST00000493683 CEACAM1P13688 526 aa16.81■□□□□ 0.28
RNF40-203ENST00000493683 TRBV24-1A0A075B6N3 115 aa16.81■□□□□ 0.28
RNF40-203ENST00000493683 IGHV3-23P01764 117 aa16.81■□□□□ 0.28
RNF40-203ENST00000493683 RNASE4P34096 147 aaKnown RBP16.81■□□□□ 0.28
RNF40-203ENST00000493683 NUDT11Q96G61 164 aa16.81■□□□□ 0.28
RNF40-203ENST00000493683 NDUFA3O95167 84 aa16.81■□□□□ 0.28
RNF40-203ENST00000493683 DERL1Q9BUN8 251 aa16.81■□□□□ 0.28
RNF40-203ENST00000493683 TRIP12Q14669 1992 aaPredicted RBP16.81■□□□□ 0.28
RNF40-203ENST00000493683 ST6GALNAC6Q969X2 333 aa16.81■□□□□ 0.28
RNF40-203ENST00000493683 CYSLTR1Q9Y271 337 aa16.81■□□□□ 0.28
RNF40-203ENST00000493683 IGKV1D-13A0A0B4J2D9 117 aa16.8■□□□□ 0.28
RNF40-203ENST00000493683 LYPD3O95274 346 aa16.8■□□□□ 0.28
RNF40-203ENST00000493683 IGKV1-13P0DP09 117 aa16.8■□□□□ 0.28
RNF40-203ENST00000493683 TSKUQ8WUA8 353 aa16.8■□□□□ 0.28
RNF40-203ENST00000493683 TRAV1-1A0A0B4J248 108 aa16.8■□□□□ 0.28
RNF40-203ENST00000493683 SEC11AP67812 179 aa16.8■□□□□ 0.28
RNF40-203ENST00000493683 ATAD5Q96QE3 1844 aa16.8■□□□□ 0.28
RNF40-203ENST00000493683 RNASE7Q9H1E1 156 aaKnown RBP16.8■□□□□ 0.28
RNF40-203ENST00000493683 TMEM133Q9H2Q1 129 aa16.8■□□□□ 0.28
RNF40-203ENST00000493683 MS4A6AQ9H2W1 248 aa16.8■□□□□ 0.28
RNF40-203ENST00000493683 H3BUT2 72 aa16.8■□□□□ 0.28
RNF40-203ENST00000493683 LHX2P50458 406 aa16.8■□□□□ 0.28
RNF40-203ENST00000493683 HEPN1Q6WQI6 88 aa16.8■□□□□ 0.28
RNF40-203ENST00000493683 HIST1H2BKO60814 126 aa16.79■□□□□ 0.28
RNF40-203ENST00000493683 HIST1H2BJP06899 126 aa16.79■□□□□ 0.28
RNF40-203ENST00000493683 C1QTNF9P0C862 333 aa16.79■□□□□ 0.28
RNF40-203ENST00000493683 HIST1H2BOP23527 126 aa16.79■□□□□ 0.28
RNF40-203ENST00000493683 HIST1H2BBP33778 126 aa16.79■□□□□ 0.28
RNF40-203ENST00000493683 HIST1H2BDP58876 126 aa16.79■□□□□ 0.28
RNF40-203ENST00000493683 HIST1H2BCP62807 126 aa16.79■□□□□ 0.28
RNF40-203ENST00000493683 HIST2H2BEQ16778 126 aa16.79■□□□□ 0.28
RNF40-203ENST00000493683 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.79■□□□□ 0.28
RNF40-203ENST00000493683 HIST1H2BHQ93079 126 aa16.79■□□□□ 0.28
RNF40-203ENST00000493683 HIST1H2BNQ99877 126 aa16.79■□□□□ 0.28
RNF40-203ENST00000493683 HIST1H2BMQ99879 126 aa16.79■□□□□ 0.28
RNF40-203ENST00000493683 RASL11AQ6T310 242 aa16.79■□□□□ 0.28
RNF40-203ENST00000493683 C1QL4Q86Z23 238 aa16.79■□□□□ 0.28
RNF40-203ENST00000493683 LINC01587Q99440 93 aa16.79■□□□□ 0.28
RNF40-203ENST00000493683 RBBP6Q7Z6E9 1792 aaKnown RBP16.79■□□□□ 0.28
RNF40-203ENST00000493683 SNAI2O43623 268 aa16.79■□□□□ 0.28
RNF40-203ENST00000493683 PSG8Q9UQ74 426 aa16.79■□□□□ 0.28
RNF40-203ENST00000493683 IGHV3-66A0A0C4DH42 116 aa16.79■□□□□ 0.28
RNF40-203ENST00000493683 TEX38Q6PEX7 206 aa16.79■□□□□ 0.28
RNF40-203ENST00000493683 OR5AN1Q8NGI8 311 aa16.79■□□□□ 0.28
RNF40-203ENST00000493683 IGKV1-9A0A0C4DH69 117 aa16.78■□□□□ 0.28
RNF40-203ENST00000493683 DPH3Q96FX2 82 aa16.78■□□□□ 0.28
RNF40-203ENST00000493683 ZNF318Q5VUA4 2279 aa16.78■□□□□ 0.28
RNF40-203ENST00000493683 H0YIZ8 118 aa16.78■□□□□ 0.28
RNF40-203ENST00000493683 ITLN2Q8WWU7 325 aaPredicted RBP16.78■□□□□ 0.28
RNF40-203ENST00000493683 CKAP5Q14008 2032 aa16.78■□□□□ 0.28
RNF40-203ENST00000493683 CD5P06127 495 aa16.78■□□□□ 0.28
RNF40-203ENST00000493683 FAM168AQ92567 244 aa16.78■□□□□ 0.28
RNF40-203ENST00000493683 RNF182Q8N6D2 247 aa16.78■□□□□ 0.28
RNF40-203ENST00000493683 ORAOV1Q8WV07 137 aa16.78■□□□□ 0.28
RNF40-203ENST00000493683 LYZL4Q96KX0 146 aa16.78■□□□□ 0.28
RNF40-203ENST00000493683 CEP290O15078 2479 aa16.78■□□□□ 0.28
RNF40-203ENST00000493683 GATA2P23769 480 aaPredicted RBP16.78■□□□□ 0.28
RNF40-203ENST00000493683 EFNB3Q15768 340 aa16.78■□□□□ 0.28
RNF40-203ENST00000493683 PTPRFP10586 1907 aa16.77■□□□□ 0.28
RNF40-203ENST00000493683 IGHV3-49A0A0A0MS15 119 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms