RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 OR1C1Q15619 314 aa9.6□□□□□ -0.87
HDAC4-210ENST00000493582 ZNF826PQ6ZT77 177 aa9.6□□□□□ -0.87
HDAC4-210ENST00000493582 C5orf17Q8NAS9 161 aa9.6□□□□□ -0.87
HDAC4-210ENST00000493582 CT55Q8WUE5 264 aa9.6□□□□□ -0.87
HDAC4-210ENST00000493582 COQ2Q96H96 371 aa9.6□□□□□ -0.87
HDAC4-210ENST00000493582 ADAMTS20P59510 1910 aa9.6□□□□□ -0.87
HDAC4-210ENST00000493582 HIST1H1AQ02539 215 aaPredicted RBP9.6□□□□□ -0.87
HDAC4-210ENST00000493582 WDR31Q8NA23 367 aa9.6□□□□□ -0.87
HDAC4-210ENST00000493582 OR13A1Q8NGR1 328 aa9.6□□□□□ -0.87
HDAC4-210ENST00000493582 SGK494Q96LW2 274 aa9.6□□□□□ -0.87
HDAC4-210ENST00000493582 RTL8AQ9BWD3 113 aa9.6□□□□□ -0.87
HDAC4-210ENST00000493582 COX6A1P12074 109 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 NRN1LQ496H8 165 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 OR4S2Q8NH73 311 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 MBD6Q96DN6 1003 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 OR2V2Q96R30 315 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 TMEM191AQ9H0A3 160 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 OCIAD1Q9NX40 245 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 TRAV5A0A0B4J249 113 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 A0A1W2PQM1 296 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 GNG7O60262 68 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 OR2J3O76001 311 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 SP1P08047 785 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 RPL39P5Q59GN2 51 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 RASL11AQ6T310 242 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 TMEM186Q96B77 213 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 CLUHP3Q96NS8 147 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 SLC25A10Q9UBX3 287 aaPredicted RBP9.59□□□□□ -0.87
HDAC4-210ENST00000493582 POLDIP2Q9Y2S7 368 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 DNAJC13O75165 2243 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 TNCP24821 2201 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 IGKV1OR2-108A0A075B7D4 117 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 GPR12P47775 334 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 LGALS7P47929 136 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 UFSP1Q6NVU6 142 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 VWA1Q6PCB0 445 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 TCF24Q7RTU0 167 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 Q8IYB0 196 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 JMJD8Q96S16 334 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 TMEM140Q9NV12 185 aa9.59□□□□□ -0.87
HDAC4-210ENST00000493582 TNRC6BQ9UPQ9 1833 aaKnown RBP9.58□□□□□ -0.88
HDAC4-210ENST00000493582 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.58□□□□□ -0.88
HDAC4-210ENST00000493582 A0A1W2PRE2 83 aa9.58□□□□□ -0.88
HDAC4-210ENST00000493582 H3BUT2 72 aa9.58□□□□□ -0.88
HDAC4-210ENST00000493582 GDF1P27539 372 aa9.58□□□□□ -0.88
HDAC4-210ENST00000493582 MLANAQ16655 118 aa9.58□□□□□ -0.88
HDAC4-210ENST00000493582 MORN5Q5VZ52 161 aa9.58□□□□□ -0.88
HDAC4-210ENST00000493582 GUSBP11Q6P575 273 aa9.58□□□□□ -0.88
HDAC4-210ENST00000493582 C2orf91Q6ZV80 131 aa9.58□□□□□ -0.88
HDAC4-210ENST00000493582 METRNQ9UJH8 293 aa9.58□□□□□ -0.88
HDAC4-210ENST00000493582 IGHV5-10-1A0A0J9YXX1 117 aa9.58□□□□□ -0.88
HDAC4-210ENST00000493582 HTR1DP28221 377 aa9.58□□□□□ -0.88
HDAC4-210ENST00000493582 GRAMD2BQ96HH9 432 aa9.58□□□□□ -0.88
HDAC4-210ENST00000493582 AP1S3Q96PC3 154 aa9.58□□□□□ -0.88
HDAC4-210ENST00000493582 IDI2-AS1Q9NZ38 188 aa9.58□□□□□ -0.88
HDAC4-210ENST00000493582 ERVK-16P61578 105 aa9.57□□□□□ -0.88
HDAC4-210ENST00000493582 Q5PR19 223 aa9.57□□□□□ -0.88
HDAC4-210ENST00000493582 PRRC2CQ9Y520 2896 aaKnown RBP9.57□□□□□ -0.88
HDAC4-210ENST00000493582 LOC102723996A0A087X1L8 192 aa9.57□□□□□ -0.88
HDAC4-210ENST00000493582 PINLYPA6NC86 204 aa9.57□□□□□ -0.88
HDAC4-210ENST00000493582 REG1BP48304 166 aa9.57□□□□□ -0.88
HDAC4-210ENST00000493582 TCTAP57738 103 aa9.57□□□□□ -0.88
HDAC4-210ENST00000493582 LINC00696Q6ZRV3 163 aa9.57□□□□□ -0.88
HDAC4-210ENST00000493582 SPEM1Q8N4L4 309 aa9.57□□□□□ -0.88
HDAC4-210ENST00000493582 TMEM251Q8N6I4 163 aa9.57□□□□□ -0.88
HDAC4-210ENST00000493582 AMMECR1Q9Y4X0 333 aaPredicted RBP9.57□□□□□ -0.88
HDAC4-210ENST00000493582 ZNF137PP52743 207 aa9.57□□□□□ -0.88
HDAC4-210ENST00000493582 RBPJQ06330 500 aa9.57□□□□□ -0.88
HDAC4-210ENST00000493582 TMEM97Q5BJF2 176 aa9.57□□□□□ -0.88
HDAC4-210ENST00000493582 GTF2H5Q6ZYL4 71 aa9.57□□□□□ -0.88
HDAC4-210ENST00000493582 TNFRSF14Q92956 283 aa9.57□□□□□ -0.88
HDAC4-210ENST00000493582 MAP1LC3CQ9BXW4 147 aa9.57□□□□□ -0.88
HDAC4-210ENST00000493582 C1RLQ9NZP8 487 aa9.57□□□□□ -0.88
HDAC4-210ENST00000493582 HLA-DRB1P01911 266 aa9.56□□□□□ -0.88
HDAC4-210ENST00000493582 ARF6P62330 175 aa9.56□□□□□ -0.88
HDAC4-210ENST00000493582 EDDM3AQ14507 147 aa9.56□□□□□ -0.88
HDAC4-210ENST00000493582 BPIFA4PQ86YQ2 179 aa9.56□□□□□ -0.88
HDAC4-210ENST00000493582 RAB37Q96AX2 223 aa9.56□□□□□ -0.88
HDAC4-210ENST00000493582 HILPDAQ9Y5L2 63 aa9.56□□□□□ -0.88
HDAC4-210ENST00000493582 SRFP11831 508 aa9.56□□□□□ -0.88
HDAC4-210ENST00000493582 CD46P15529 392 aa9.56□□□□□ -0.88
HDAC4-210ENST00000493582 HES3Q5TGS1 186 aa9.56□□□□□ -0.88
HDAC4-210ENST00000493582 SAMD13Q5VXD3 122 aa9.56□□□□□ -0.88
HDAC4-210ENST00000493582 LYSMD4Q5XG99 296 aa9.56□□□□□ -0.88
HDAC4-210ENST00000493582 C16orf54Q6UWD8 224 aa9.56□□□□□ -0.88
HDAC4-210ENST00000493582 GNG12Q9UBI6 72 aa9.56□□□□□ -0.88
HDAC4-210ENST00000493582 KLF7O75840 302 aaPredicted RBP9.55□□□□□ -0.88
HDAC4-210ENST00000493582 CSN3P07498 182 aa9.55□□□□□ -0.88
HDAC4-210ENST00000493582 PYYP10082 97 aa9.55□□□□□ -0.88
HDAC4-210ENST00000493582 UBE2L3P68036 154 aaKnown RBP9.55□□□□□ -0.88
HDAC4-210ENST00000493582 RNFT1Q5M7Z0 435 aa9.55□□□□□ -0.88
HDAC4-210ENST00000493582 OR9G1Q8NH87 305 aa9.55□□□□□ -0.88
HDAC4-210ENST00000493582 SLC25A33Q9BSK2 321 aa9.55□□□□□ -0.88
HDAC4-210ENST00000493582 LINC00470Q9BZP3 86 aa9.55□□□□□ -0.88
HDAC4-210ENST00000493582 KLF13Q9Y2Y9 288 aaPredicted RBP9.55□□□□□ -0.88
HDAC4-210ENST00000493582 A0A1B0GXF2 115 aa9.55□□□□□ -0.88
HDAC4-210ENST00000493582 CELA3AP09093 270 aa9.55□□□□□ -0.88
HDAC4-210ENST00000493582 ZNF766Q5HY98 468 aa9.55□□□□□ -0.88
HDAC4-210ENST00000493582 TEX45Q8NA69 505 aa9.55□□□□□ -0.88
HDAC4-210ENST00000493582 OR4A5Q8NH83 315 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms